RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 GRM1Q13255 1194 aa18.25■□□□□ 0.51
SMARCE1-213ENST00000578044 DLK2Q6UY11 383 aa18.25■□□□□ 0.51
SMARCE1-213ENST00000578044 TDRD7Q8NHU6 1098 aaKnown RBP18.25■□□□□ 0.51
SMARCE1-213ENST00000578044 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
SMARCE1-213ENST00000578044 ARAP2Q8WZ64 1704 aa18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 ZBTB22O15209 634 aa18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 KIAA0825Q8IV33 1275 aa18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 BICC1Q9H694 974 aaKnown RBP18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 HDAC5Q9UQL6 1122 aa18.24■□□□□ 0.51
SMARCE1-213ENST00000578044 LAMB1P07942 1786 aa18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 RASAL3Q86YV0 1011 aa18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 CERS5Q8N5B7 392 aa18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 ZNF594Q96JF6 807 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 MXD3Q9BW11 206 aa18.23■□□□□ 0.51
SMARCE1-213ENST00000578044 MYO1BO43795 1136 aa18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 MAP3K11Q16584 847 aa18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 NOM1Q5C9Z4 860 aaKnown RBP18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 MRIQ9BWK5 157 aa18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
SMARCE1-213ENST00000578044 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 SNAP23O00161 211 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 PDE8BO95263 885 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 HDLBPQ00341 1268 aaKnown RBP18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 LDLRAD1Q5T700 205 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 FBXO33Q7Z6M2 555 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 FBXW7Q969H0 707 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
SMARCE1-213ENST00000578044 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
SMARCE1-213ENST00000578044 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
SMARCE1-213ENST00000578044 ABHD8Q96I13 439 aa18.2■□□□□ 0.5
SMARCE1-213ENST00000578044 CFHR5Q9BXR6 569 aa18.2■□□□□ 0.5
SMARCE1-213ENST00000578044 DEFB129Q9H1M3 183 aa18.2■□□□□ 0.5
SMARCE1-213ENST00000578044 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
SMARCE1-213ENST00000578044 TM4SF4P48230 202 aa18.19■□□□□ 0.5
SMARCE1-213ENST00000578044 PUS3Q9BZE2 481 aaKnown RBP18.19■□□□□ 0.5
SMARCE1-213ENST00000578044 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
SMARCE1-213ENST00000578044 TNFAIP1Q13829 316 aa18.18■□□□□ 0.5
SMARCE1-213ENST00000578044 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
SMARCE1-213ENST00000578044 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
SMARCE1-213ENST00000578044 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
SMARCE1-213ENST00000578044 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
SMARCE1-213ENST00000578044 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
SMARCE1-213ENST00000578044 FGFR2P21802 821 aa18.17■□□□□ 0.5
SMARCE1-213ENST00000578044 INHBEP58166 350 aa18.17■□□□□ 0.5
SMARCE1-213ENST00000578044 CFAP100Q494V2 611 aa18.17■□□□□ 0.5
SMARCE1-213ENST00000578044 MFSD14BQ5SR56 506 aa18.17■□□□□ 0.5
SMARCE1-213ENST00000578044 PPP1R12BO60237 982 aaPredicted RBP18.16■□□□□ 0.5
SMARCE1-213ENST00000578044 PLIN1O60240 522 aa18.16■□□□□ 0.5
SMARCE1-213ENST00000578044 CIAO1O76071 339 aa18.16■□□□□ 0.5
SMARCE1-213ENST00000578044 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
SMARCE1-213ENST00000578044 METTL24Q5JXM2 366 aa18.16■□□□□ 0.5
SMARCE1-213ENST00000578044 PRMT6Q96LA8 375 aaPredicted RBP18.16■□□□□ 0.5
SMARCE1-213ENST00000578044 UBE2Q2LH0YL09 131 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 EYA2O00167 538 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 CAPN15O75808 1086 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 GYG1P46976 350 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 RFX5P48382 616 aaPredicted RBP18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 RGS19P49795 217 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
SMARCE1-213ENST00000578044 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 PTPN12Q05209 780 aaKnown RBP18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 VPS37DQ86XT2 251 aa18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 TSKSQ9UJT2 592 aa18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 TTF2Q9UNY4 1162 aaKnown RBP18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 MAST3O60307 1309 aa18.14■□□□□ 0.49
SMARCE1-213ENST00000578044 TRPA1O75762 1119 aa18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 ALDH1A1P00352 501 aa18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 TTLL12Q14166 644 aaPredicted RBP18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 PRAMEF18Q5VWM3 479 aa18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 LPIN2Q92539 896 aa18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 MYH13Q9UKX3 1938 aa18.13■□□□□ 0.49
SMARCE1-213ENST00000578044 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 INTS3Q68E01 1043 aaKnown RBP18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 MOB2Q70IA6 237 aa18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 DZIP1LQ8IYY4 767 aaKnown RBP18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 MCOLN1Q9GZU1 580 aa18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 NOB1Q9ULX3 412 aaKnown RBP18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 SSC5DA1L4H1 1573 aa18.12■□□□□ 0.49
SMARCE1-213ENST00000578044 MANSC4A6NHS7 340 aaPredicted RBP18.11■□□□□ 0.49
SMARCE1-213ENST00000578044 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
SMARCE1-213ENST00000578044 ATG9AQ7Z3C6 839 aa18.11■□□□□ 0.49
SMARCE1-213ENST00000578044 ZDHHC15Q96MV8 337 aa18.11■□□□□ 0.49
SMARCE1-213ENST00000578044 ANGEL1Q9UNK9 670 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms