RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 SAGE1Q9NXZ1 904 aa18.79■□□□□ 0.6
MKS1-205ENST00000577315 SASH1O94885 1247 aa18.78■□□□□ 0.6
MKS1-205ENST00000577315 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
MKS1-205ENST00000577315 DLGAP5Q15398 846 aa18.78■□□□□ 0.6
MKS1-205ENST00000577315 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
MKS1-205ENST00000577315 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.6
MKS1-205ENST00000577315 MYO1BO43795 1136 aa18.77■□□□□ 0.6
MKS1-205ENST00000577315 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
MKS1-205ENST00000577315 ZIC5Q96T25 663 aa18.77■□□□□ 0.6
MKS1-205ENST00000577315 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
MKS1-205ENST00000577315 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
MKS1-205ENST00000577315 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
MKS1-205ENST00000577315 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
MKS1-205ENST00000577315 TTLL12Q14166 644 aaPredicted RBP18.76■□□□□ 0.59
MKS1-205ENST00000577315 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
MKS1-205ENST00000577315 TDRD7Q8NHU6 1098 aaKnown RBP18.76■□□□□ 0.59
MKS1-205ENST00000577315 SMC4Q9NTJ3 1288 aa18.76■□□□□ 0.59
MKS1-205ENST00000577315 ARMC9Q7Z3E5 817 aa18.75■□□□□ 0.59
MKS1-205ENST00000577315 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
MKS1-205ENST00000577315 CDCA7LQ96GN5 454 aa18.75■□□□□ 0.59
MKS1-205ENST00000577315 PUS3Q9BZE2 481 aaKnown RBP18.75■□□□□ 0.59
MKS1-205ENST00000577315 USP44Q9H0E7 712 aa18.75■□□□□ 0.59
MKS1-205ENST00000577315 PPP2R3BQ9Y5P8 575 aa18.75■□□□□ 0.59
MKS1-205ENST00000577315 MYH13Q9UKX3 1938 aa18.74■□□□□ 0.59
MKS1-205ENST00000577315 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
MKS1-205ENST00000577315 ABHD8Q96I13 439 aa18.74■□□□□ 0.59
MKS1-205ENST00000577315 SCAF8Q9UPN6 1271 aaKnown RBP18.74■□□□□ 0.59
MKS1-205ENST00000577315 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
MKS1-205ENST00000577315 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
MKS1-205ENST00000577315 CFAP100Q494V2 611 aa18.73■□□□□ 0.59
MKS1-205ENST00000577315 CAVIN4Q5BKX8 364 aa18.73■□□□□ 0.59
MKS1-205ENST00000577315 METTL24Q5JXM2 366 aa18.73■□□□□ 0.59
MKS1-205ENST00000577315 PRAMEF18Q5VWM3 479 aa18.73■□□□□ 0.59
MKS1-205ENST00000577315 VPS37DQ86XT2 251 aa18.73■□□□□ 0.59
MKS1-205ENST00000577315 FAM84BQ96KN1 310 aaPredicted RBP18.73■□□□□ 0.59
MKS1-205ENST00000577315 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
MKS1-205ENST00000577315 SPDYE2BA6NHP3 402 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 PDE8BO95263 885 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 SPDYE6P0CI01 402 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 GYG1P46976 350 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
MKS1-205ENST00000577315 DEFB129Q9H1M3 183 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
MKS1-205ENST00000577315 RBM5P52756 815 aaKnown RBP eCLIP18.71■□□□□ 0.59
MKS1-205ENST00000577315 LRRC24Q50LG9 513 aa18.71■□□□□ 0.59
MKS1-205ENST00000577315 MOB2Q70IA6 237 aa18.71■□□□□ 0.59
MKS1-205ENST00000577315 FBXO33Q7Z6M2 555 aa18.71■□□□□ 0.59
MKS1-205ENST00000577315 SERPINA10Q9UK55 444 aa18.71■□□□□ 0.59
MKS1-205ENST00000577315 KIF16BQ96L93 1317 aa18.71■□□□□ 0.59
MKS1-205ENST00000577315 UNCXA6NJT0 531 aa18.7■□□□□ 0.58
MKS1-205ENST00000577315 TRPA1O75762 1119 aa18.7■□□□□ 0.58
MKS1-205ENST00000577315 TNFAIP1Q13829 316 aa18.7■□□□□ 0.58
MKS1-205ENST00000577315 SUPT20HL1Q3ZLR7 823 aa18.7■□□□□ 0.58
MKS1-205ENST00000577315 TBC1D22AQ8WUA7 517 aa18.7■□□□□ 0.58
MKS1-205ENST00000577315 FBXO3Q9UK99 471 aa18.7■□□□□ 0.58
MKS1-205ENST00000577315 PPP1R12BO60237 982 aaPredicted RBP18.69■□□□□ 0.58
MKS1-205ENST00000577315 IFIT1P09914 478 aaKnown RBP18.69■□□□□ 0.58
MKS1-205ENST00000577315 UBTFL1P0CB47 393 aaPredicted RBP18.69■□□□□ 0.58
MKS1-205ENST00000577315 MAP3K11Q16584 847 aa18.69■□□□□ 0.58
MKS1-205ENST00000577315 VGLL2Q8N8G2 317 aa18.69■□□□□ 0.58
MKS1-205ENST00000577315 PRMT6Q96LA8 375 aaPredicted RBP18.69■□□□□ 0.58
MKS1-205ENST00000577315 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
MKS1-205ENST00000577315 JAG2Q9Y219 1238 aa18.69■□□□□ 0.58
MKS1-205ENST00000577315 EYA2O00167 538 aa18.68■□□□□ 0.58
MKS1-205ENST00000577315 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
MKS1-205ENST00000577315 PUM3Q15397 648 aaKnown RBP18.68■□□□□ 0.58
MKS1-205ENST00000577315 LDLRAD1Q5T700 205 aa18.68■□□□□ 0.58
MKS1-205ENST00000577315 VEZTQ9HBM0 779 aa18.68■□□□□ 0.58
MKS1-205ENST00000577315 NOB1Q9ULX3 412 aaKnown RBP18.68■□□□□ 0.58
MKS1-205ENST00000577315 ANGEL1Q9UNK9 670 aaKnown RBP18.68■□□□□ 0.58
MKS1-205ENST00000577315 LAMB1P07942 1786 aa18.68■□□□□ 0.58
MKS1-205ENST00000577315 TM4SF4P48230 202 aa18.67■□□□□ 0.58
MKS1-205ENST00000577315 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
MKS1-205ENST00000577315 PTPN12Q05209 780 aaKnown RBP18.67■□□□□ 0.58
MKS1-205ENST00000577315 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
MKS1-205ENST00000577315 DGKZQ13574 1117 aa18.67■□□□□ 0.58
MKS1-205ENST00000577315 ARHGAP45Q92619 1136 aa18.67■□□□□ 0.58
MKS1-205ENST00000577315 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
MKS1-205ENST00000577315 RFX5P48382 616 aaPredicted RBP18.66■□□□□ 0.58
MKS1-205ENST00000577315 PRKG1Q13976 671 aa18.66■□□□□ 0.58
MKS1-205ENST00000577315 KLHDC4Q8TBB5 520 aa18.66■□□□□ 0.58
MKS1-205ENST00000577315 MCOLN1Q9GZU1 580 aa18.66■□□□□ 0.58
MKS1-205ENST00000577315 SUGT1Q9Y2Z0 365 aa18.66■□□□□ 0.58
MKS1-205ENST00000577315 PCDHAC2Q9Y5I4 1007 aa18.66■□□□□ 0.58
MKS1-205ENST00000577315 SLC5A1P13866 664 aa18.65■□□□□ 0.58
MKS1-205ENST00000577315 FGFR2P21802 821 aa18.65■□□□□ 0.58
MKS1-205ENST00000577315 RARSP54136 660 aaKnown RBP18.65■□□□□ 0.58
MKS1-205ENST00000577315 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
MKS1-205ENST00000577315 LPIN2Q92539 896 aa18.65■□□□□ 0.58
MKS1-205ENST00000577315 MRIQ9BWK5 157 aa18.65■□□□□ 0.58
MKS1-205ENST00000577315 MAST3O60307 1309 aa18.65■□□□□ 0.58
MKS1-205ENST00000577315 CIAO1O76071 339 aa18.64■□□□□ 0.57
MKS1-205ENST00000577315 CRKP46108 304 aa18.64■□□□□ 0.57
MKS1-205ENST00000577315 IREB2P48200 963 aaKnown RBP18.64■□□□□ 0.57
MKS1-205ENST00000577315 TNNI2P48788 182 aa18.64■□□□□ 0.57
MKS1-205ENST00000577315 INHBEP58166 350 aa18.64■□□□□ 0.57
MKS1-205ENST00000577315 CHAF1AQ13111 956 aaPredicted RBP18.64■□□□□ 0.57
MKS1-205ENST00000577315 RASA3Q14644 834 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms