RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 BCAMP50895 628 aa16.83■□□□□ 0.28
CIITA-210ENST00000575513 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
CIITA-210ENST00000575513 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
CIITA-210ENST00000575513 RBM26Q5T8P6 1007 aaKnown RBP16.83■□□□□ 0.28
CIITA-210ENST00000575513 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
CIITA-210ENST00000575513 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
CIITA-210ENST00000575513 SCARF1Q14162 830 aa16.82■□□□□ 0.28
CIITA-210ENST00000575513 CERS5Q8N5B7 392 aa16.82■□□□□ 0.28
CIITA-210ENST00000575513 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
CIITA-210ENST00000575513 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
CIITA-210ENST00000575513 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
CIITA-210ENST00000575513 ZBTB40Q9NUA8 1239 aa16.82■□□□□ 0.28
CIITA-210ENST00000575513 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
CIITA-210ENST00000575513 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
CIITA-210ENST00000575513 MFSD14BQ5SR56 506 aa16.81■□□□□ 0.28
CIITA-210ENST00000575513 CEP85Q6P2H3 762 aa16.81■□□□□ 0.28
CIITA-210ENST00000575513 KIAA0825Q8IV33 1275 aa16.81■□□□□ 0.28
CIITA-210ENST00000575513 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
CIITA-210ENST00000575513 GNL3LQ9NVN8 582 aaKnown RBP16.81■□□□□ 0.28
CIITA-210ENST00000575513 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
CIITA-210ENST00000575513 SUGT1Q9Y2Z0 365 aa16.81■□□□□ 0.28
CIITA-210ENST00000575513 SEMA3EO15041 775 aa16.8■□□□□ 0.28
CIITA-210ENST00000575513 FRAT2O75474 233 aaPredicted RBP16.8■□□□□ 0.28
CIITA-210ENST00000575513 TFCP2Q12800 502 aa16.8■□□□□ 0.28
CIITA-210ENST00000575513 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
CIITA-210ENST00000575513 ZBED3Q96IU2 234 aaPredicted RBP16.8■□□□□ 0.28
CIITA-210ENST00000575513 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
CIITA-210ENST00000575513 GPR108Q9NPR9 543 aa16.8■□□□□ 0.28
CIITA-210ENST00000575513 WNT10BO00744 389 aa16.79■□□□□ 0.28
CIITA-210ENST00000575513 SULF1Q8IWU6 871 aa16.79■□□□□ 0.28
CIITA-210ENST00000575513 KLRG1Q96E93 195 aa16.79■□□□□ 0.28
CIITA-210ENST00000575513 MRIQ9BWK5 157 aa16.79■□□□□ 0.28
CIITA-210ENST00000575513 GLIS2Q9BZE0 524 aaPredicted RBP16.79■□□□□ 0.28
CIITA-210ENST00000575513 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 TRAF5O00463 557 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 SURF6O75683 361 aaKnown RBP16.78■□□□□ 0.28
CIITA-210ENST00000575513 TIMM10P62072 90 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 HDLBPQ00341 1268 aaKnown RBP16.78■□□□□ 0.28
CIITA-210ENST00000575513 NBPF9Q3BBW0 867 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 CST9Q5W186 159 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 USP48Q86UV5 1035 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 WDR66Q8TBY9 1149 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 GGA3Q9NZ52 723 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 SERPINA10Q9UK55 444 aa16.78■□□□□ 0.28
CIITA-210ENST00000575513 ZNF646O15015 1829 aaPredicted RBP16.77■□□□□ 0.28
CIITA-210ENST00000575513 HTRA3P83110 453 aa16.77■□□□□ 0.28
CIITA-210ENST00000575513 DLGAP5Q15398 846 aa16.77■□□□□ 0.28
CIITA-210ENST00000575513 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.28
CIITA-210ENST00000575513 ANGEL2Q5VTE6 544 aaKnown RBP16.77■□□□□ 0.28
CIITA-210ENST00000575513 DENND2AQ9ULE3 1009 aa16.77■□□□□ 0.28
CIITA-210ENST00000575513 IQSEC3Q9UPP2 1182 aaPredicted RBP16.77■□□□□ 0.28
CIITA-210ENST00000575513 PDS5AQ29RF7 1337 aaKnown RBP16.76■□□□□ 0.27
CIITA-210ENST00000575513 HMMRO75330 724 aa16.76■□□□□ 0.27
CIITA-210ENST00000575513 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
CIITA-210ENST00000575513 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
CIITA-210ENST00000575513 XAGE2Q96GT9 111 aa16.76■□□□□ 0.27
CIITA-210ENST00000575513 TTF2Q9UNY4 1162 aaKnown RBP16.76■□□□□ 0.27
CIITA-210ENST00000575513 JAG2Q9Y219 1238 aa16.76■□□□□ 0.27
CIITA-210ENST00000575513 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 RASSF10A6NK89 507 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 F8W031 263 aaPredicted RBP16.75■□□□□ 0.27
CIITA-210ENST00000575513 MYO1BO43795 1136 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 CELF2O95319 508 aaKnown RBP16.75■□□□□ 0.27
CIITA-210ENST00000575513 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 PHKA1P46020 1223 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
CIITA-210ENST00000575513 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
CIITA-210ENST00000575513 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
CIITA-210ENST00000575513 MAST3O60307 1309 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 ASTN2O75129 1339 aaPredicted RBP16.74■□□□□ 0.27
CIITA-210ENST00000575513 SALL1Q9NSC2 1324 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 ADORA1P30542 326 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.27
CIITA-210ENST00000575513 APOBEC3FQ8IUX4 373 aaKnown RBP16.74■□□□□ 0.27
CIITA-210ENST00000575513 JMYQ8N9B5 988 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 HHIPL1Q96JK4 782 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 TLL2Q9Y6L7 1015 aa16.74■□□□□ 0.27
CIITA-210ENST00000575513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
CIITA-210ENST00000575513 RRP1P56182 461 aaKnown RBP16.73■□□□□ 0.27
CIITA-210ENST00000575513 DEFB115Q30KQ5 88 aa16.73■□□□□ 0.27
CIITA-210ENST00000575513 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
CIITA-210ENST00000575513 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
CIITA-210ENST00000575513 PRMT6Q96LA8 375 aaPredicted RBP16.73■□□□□ 0.27
CIITA-210ENST00000575513 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
CIITA-210ENST00000575513 CNTNAP1P78357 1384 aa16.73■□□□□ 0.27
CIITA-210ENST00000575513 ADM5C9JUS6 153 aa16.72■□□□□ 0.27
CIITA-210ENST00000575513 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
CIITA-210ENST00000575513 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
CIITA-210ENST00000575513 HHIPL2Q6UWX4 724 aa16.72■□□□□ 0.27
CIITA-210ENST00000575513 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
CIITA-210ENST00000575513 SIRT2Q8IXJ6 389 aa16.72■□□□□ 0.27
CIITA-210ENST00000575513 ABT1Q9ULW3 272 aaKnown RBP16.72■□□□□ 0.27
CIITA-210ENST00000575513 UQCRFS1P1P0C7P4 283 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
CIITA-210ENST00000575513 CRKP46108 304 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 FKBP1BP68106 108 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 RASGRF1Q13972 1273 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 GRIK5Q16478 980 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms