RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 APOBEC3FQ8IUX4 373 aaKnown RBP19.26■□□□□ 0.67
CTNS-209ENST00000574776 JAG2Q9Y219 1238 aa19.26■□□□□ 0.67
CTNS-209ENST00000574776 SUCLG2Q96I99 432 aa19.25■□□□□ 0.67
CTNS-209ENST00000574776 PCDHAC2Q9Y5I4 1007 aa19.25■□□□□ 0.67
CTNS-209ENST00000574776 RGS19P49795 217 aa19.24■□□□□ 0.67
CTNS-209ENST00000574776 PTPN12Q05209 780 aaKnown RBP19.24■□□□□ 0.67
CTNS-209ENST00000574776 MKRN3Q13064 507 aaKnown RBP19.24■□□□□ 0.67
CTNS-209ENST00000574776 ARMC9Q7Z3E5 817 aa19.24■□□□□ 0.67
CTNS-209ENST00000574776 KAZALD1Q96I82 304 aa19.24■□□□□ 0.67
CTNS-209ENST00000574776 PUS3Q9BZE2 481 aaKnown RBP19.24■□□□□ 0.67
CTNS-209ENST00000574776 ZNF521Q96K83 1311 aa19.24■□□□□ 0.67
CTNS-209ENST00000574776 NBPF7P0C2Y1 421 aaPredicted RBP19.23■□□□□ 0.67
CTNS-209ENST00000574776 CFAP100Q494V2 611 aa19.23■□□□□ 0.67
CTNS-209ENST00000574776 MTMR14Q8NCE2 650 aa19.23■□□□□ 0.67
CTNS-209ENST00000574776 PRMT6Q96LA8 375 aaPredicted RBP19.23■□□□□ 0.67
CTNS-209ENST00000574776 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
CTNS-209ENST00000574776 FZD1Q9UP38 647 aa19.23■□□□□ 0.67
CTNS-209ENST00000574776 TBC1D8O95759 1140 aa19.22■□□□□ 0.67
CTNS-209ENST00000574776 FKBP1AP62942 108 aaKnown RBP19.22■□□□□ 0.67
CTNS-209ENST00000574776 MLLT1Q03111 559 aaPredicted RBP19.22■□□□□ 0.67
CTNS-209ENST00000574776 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
CTNS-209ENST00000574776 ANGEL1Q9UNK9 670 aaKnown RBP19.22■□□□□ 0.67
CTNS-209ENST00000574776 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
CTNS-209ENST00000574776 TM4SF4P48230 202 aa19.21■□□□□ 0.67
CTNS-209ENST00000574776 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
CTNS-209ENST00000574776 LDLRAD1Q5T700 205 aa19.21■□□□□ 0.67
CTNS-209ENST00000574776 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
CTNS-209ENST00000574776 CLRN2A0PK11 232 aa19.2■□□□□ 0.66
CTNS-209ENST00000574776 SPDYE2BA6NHP3 402 aa19.2■□□□□ 0.66
CTNS-209ENST00000574776 MYO1BO43795 1136 aa19.2■□□□□ 0.66
CTNS-209ENST00000574776 SPDYE6P0CI01 402 aa19.2■□□□□ 0.66
CTNS-209ENST00000574776 HIBADHP31937 336 aaKnown RBP19.2■□□□□ 0.66
CTNS-209ENST00000574776 GYG1P46976 350 aa19.2■□□□□ 0.66
CTNS-209ENST00000574776 RBM5P52756 815 aaKnown RBP eCLIP19.2■□□□□ 0.66
CTNS-209ENST00000574776 TDRD7Q8NHU6 1098 aaKnown RBP19.2■□□□□ 0.66
CTNS-209ENST00000574776 FAM84BQ96KN1 310 aaPredicted RBP19.2■□□□□ 0.66
CTNS-209ENST00000574776 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
CTNS-209ENST00000574776 BICC1Q9H694 974 aaKnown RBP19.19■□□□□ 0.66
CTNS-209ENST00000574776 VEZTQ9HBM0 779 aa19.19■□□□□ 0.66
CTNS-209ENST00000574776 UTYO14607 1347 aa19.19■□□□□ 0.66
CTNS-209ENST00000574776 AOX1Q06278 1338 aa19.19■□□□□ 0.66
CTNS-209ENST00000574776 FAM205AQ6ZU69 1335 aa19.19■□□□□ 0.66
CTNS-209ENST00000574776 SPRYD7Q5W111 196 aa19.18■□□□□ 0.66
CTNS-209ENST00000574776 CTU1Q7Z7A3 348 aaKnown RBP19.18■□□□□ 0.66
CTNS-209ENST00000574776 SLC10A4Q96EP9 437 aa19.18■□□□□ 0.66
CTNS-209ENST00000574776 MFSD14BQ5SR56 506 aa19.17■□□□□ 0.66
CTNS-209ENST00000574776 ZNF296Q8WUU4 475 aaPredicted RBP19.17■□□□□ 0.66
CTNS-209ENST00000574776 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
CTNS-209ENST00000574776 PPP2R3BQ9Y5P8 575 aa19.17■□□□□ 0.66
CTNS-209ENST00000574776 E9PSI1 815 aa19.16■□□□□ 0.66
CTNS-209ENST00000574776 PPP1R12BO60237 982 aaPredicted RBP19.16■□□□□ 0.66
CTNS-209ENST00000574776 SREBF2Q12772 1141 aa19.16■□□□□ 0.66
CTNS-209ENST00000574776 RABL6Q3YEC7 729 aaPredicted RBP19.16■□□□□ 0.66
CTNS-209ENST00000574776 SUPT20HL1Q3ZLR7 823 aa19.16■□□□□ 0.66
CTNS-209ENST00000574776 LRRC24Q50LG9 513 aa19.16■□□□□ 0.66
CTNS-209ENST00000574776 NBPF12Q5TAG4 269 aaPredicted RBP19.16■□□□□ 0.66
CTNS-209ENST00000574776 ANKRD44Q8N8A2 993 aa19.16■□□□□ 0.66
CTNS-209ENST00000574776 TTF2Q9UNY4 1162 aaKnown RBP19.16■□□□□ 0.66
CTNS-209ENST00000574776 MROH5Q6ZUA9 1318 aa19.16■□□□□ 0.66
CTNS-209ENST00000574776 COL1A1P02452 1464 aaPredicted RBP19.16■□□□□ 0.66
CTNS-209ENST00000574776 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
CTNS-209ENST00000574776 RASA3Q14644 834 aa19.15■□□□□ 0.66
CTNS-209ENST00000574776 MAP3K11Q16584 847 aa19.15■□□□□ 0.66
CTNS-209ENST00000574776 CLMNQ96JQ2 1002 aa19.15■□□□□ 0.66
CTNS-209ENST00000574776 PTPRCP08575 1304 aa19.15■□□□□ 0.66
CTNS-209ENST00000574776 GPR25O00155 361 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 METTL24Q5JXM2 366 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 FBXO33Q7Z6M2 555 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 USP44Q9H0E7 712 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 R3HDMLQ9H3Y0 253 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 TDRD3Q9H7E2 651 aaKnown RBP19.14■□□□□ 0.65
CTNS-209ENST00000574776 ZNF70Q9UC06 446 aaPredicted RBP19.14■□□□□ 0.65
CTNS-209ENST00000574776 IQSEC3Q9UPP2 1182 aaPredicted RBP19.14■□□□□ 0.65
CTNS-209ENST00000574776 ECM29Q5VYK3 1845 aa19.14■□□□□ 0.65
CTNS-209ENST00000574776 USP2O75604 605 aaPredicted RBP19.13■□□□□ 0.65
CTNS-209ENST00000574776 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
CTNS-209ENST00000574776 SERPINA10Q9UK55 444 aa19.13■□□□□ 0.65
CTNS-209ENST00000574776 SSC5DA1L4H1 1573 aa19.13■□□□□ 0.65
CTNS-209ENST00000574776 PDE8BO95263 885 aa19.12■□□□□ 0.65
CTNS-209ENST00000574776 SOX10P56693 466 aa19.12■□□□□ 0.65
CTNS-209ENST00000574776 CHAF1AQ13111 956 aaPredicted RBP19.12■□□□□ 0.65
CTNS-209ENST00000574776 GRIK5Q16478 980 aa19.12■□□□□ 0.65
CTNS-209ENST00000574776 SPDYE2Q495Y8 402 aa19.12■□□□□ 0.65
CTNS-209ENST00000574776 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
CTNS-209ENST00000574776 MANSC4A6NHS7 340 aaPredicted RBP19.11■□□□□ 0.65
CTNS-209ENST00000574776 FRAT2O75474 233 aaPredicted RBP19.11■□□□□ 0.65
CTNS-209ENST00000574776 INHBEP58166 350 aa19.11■□□□□ 0.65
CTNS-209ENST00000574776 PKN2Q16513 984 aaKnown RBP19.11■□□□□ 0.65
CTNS-209ENST00000574776 CAVIN4Q5BKX8 364 aa19.11■□□□□ 0.65
CTNS-209ENST00000574776 NOM1Q5C9Z4 860 aaKnown RBP19.11■□□□□ 0.65
CTNS-209ENST00000574776 VGLL2Q8N8G2 317 aa19.11■□□□□ 0.65
CTNS-209ENST00000574776 WNK4Q96J92 1243 aa19.11■□□□□ 0.65
CTNS-209ENST00000574776 HPS5Q9UPZ3 1129 aa19.11■□□□□ 0.65
CTNS-209ENST00000574776 UNCXA6NJT0 531 aa19.1■□□□□ 0.65
CTNS-209ENST00000574776 FKTNO75072 461 aa19.1■□□□□ 0.65
CTNS-209ENST00000574776 ZBTB48P10074 688 aaPredicted RBP19.1■□□□□ 0.65
CTNS-209ENST00000574776 CRKP46108 304 aa19.1■□□□□ 0.65
CTNS-209ENST00000574776 IREB2P48200 963 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms