RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 MXD3Q9BW11 206 aa20.63■□□□□ 0.89
TVP23B-207ENST00000574294 GNAI3P08754 354 aa20.62■□□□□ 0.89
TVP23B-207ENST00000574294 NOGQ13253 232 aa20.62■□□□□ 0.89
TVP23B-207ENST00000574294 NBPF9Q3BBW0 867 aa20.62■□□□□ 0.89
TVP23B-207ENST00000574294 VPS37DQ86XT2 251 aa20.62■□□□□ 0.89
TVP23B-207ENST00000574294 APOBEC3FQ8IUX4 373 aaKnown RBP20.62■□□□□ 0.89
TVP23B-207ENST00000574294 CDCA5Q96FF9 252 aa20.62■□□□□ 0.89
TVP23B-207ENST00000574294 FAM84BQ96KN1 310 aaPredicted RBP20.62■□□□□ 0.89
TVP23B-207ENST00000574294 PRDM10Q9NQV6 1147 aa20.62■□□□□ 0.89
TVP23B-207ENST00000574294 ASTN2O75129 1339 aaPredicted RBP20.61■□□□□ 0.89
TVP23B-207ENST00000574294 DLGAP5Q15398 846 aa20.61■□□□□ 0.89
TVP23B-207ENST00000574294 CCDC102AQ96A19 550 aa20.61■□□□□ 0.89
TVP23B-207ENST00000574294 EYA2O00167 538 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 FOXN1O15353 648 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 CA12O43570 354 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 MYO1BO43795 1136 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 NF2P35240 595 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 GRM1Q13255 1194 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 PUM3Q15397 648 aaKnown RBP20.6■□□□□ 0.89
TVP23B-207ENST00000574294 LRRC24Q50LG9 513 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 COL13A1Q5TAT6 717 aaPredicted RBP20.6■□□□□ 0.89
TVP23B-207ENST00000574294 RGMBQ6NW40 437 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 VGLL2Q8N8G2 317 aa20.6■□□□□ 0.89
TVP23B-207ENST00000574294 ZBED3Q96IU2 234 aaPredicted RBP20.6■□□□□ 0.89
TVP23B-207ENST00000574294 CIAO1O76071 339 aa20.59■□□□□ 0.89
TVP23B-207ENST00000574294 IFIT1P09914 478 aaKnown RBP20.59■□□□□ 0.89
TVP23B-207ENST00000574294 GYG1P46976 350 aa20.59■□□□□ 0.89
TVP23B-207ENST00000574294 FBXO33Q7Z6M2 555 aa20.59■□□□□ 0.89
TVP23B-207ENST00000574294 CERS5Q8N5B7 392 aa20.59■□□□□ 0.89
TVP23B-207ENST00000574294 COL1A1P02452 1464 aaPredicted RBP20.58■□□□□ 0.89
TVP23B-207ENST00000574294 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
TVP23B-207ENST00000574294 PTPN12Q05209 780 aaKnown RBP20.58■□□□□ 0.89
TVP23B-207ENST00000574294 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
TVP23B-207ENST00000574294 TBC1D22AQ8WUA7 517 aa20.58■□□□□ 0.89
TVP23B-207ENST00000574294 PAPPA2Q9BXP8 1791 aa20.58■□□□□ 0.89
TVP23B-207ENST00000574294 ECM29Q5VYK3 1845 aa20.57■□□□□ 0.88
TVP23B-207ENST00000574294 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
TVP23B-207ENST00000574294 MFSD14BQ5SR56 506 aa20.57■□□□□ 0.88
TVP23B-207ENST00000574294 DLK2Q6UY11 383 aa20.57■□□□□ 0.88
TVP23B-207ENST00000574294 KLHDC4Q8TBB5 520 aa20.57■□□□□ 0.88
TVP23B-207ENST00000574294 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 SLC5A1P13866 664 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 TRIM27P14373 513 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
TVP23B-207ENST00000574294 REM2Q8IYK8 340 aaPredicted RBP20.56■□□□□ 0.88
TVP23B-207ENST00000574294 TNS4Q8IZW8 715 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 LPIN2Q92539 896 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 SERPINA10Q9UK55 444 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 PPP2R3BQ9Y5P8 575 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 LRRFIP2Q9Y608 721 aaKnown RBP20.56■□□□□ 0.88
TVP23B-207ENST00000574294 ARAP2Q8WZ64 1704 aa20.56■□□□□ 0.88
TVP23B-207ENST00000574294 AOC2O75106 756 aa20.55■□□□□ 0.88
TVP23B-207ENST00000574294 FGFR2P21802 821 aa20.55■□□□□ 0.88
TVP23B-207ENST00000574294 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
TVP23B-207ENST00000574294 ZNF157P51786 506 aaPredicted RBP20.55■□□□□ 0.88
TVP23B-207ENST00000574294 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
TVP23B-207ENST00000574294 FRAT1Q92837 279 aaPredicted RBP20.55■□□□□ 0.88
TVP23B-207ENST00000574294 MEIS3Q99687 375 aa20.55■□□□□ 0.88
TVP23B-207ENST00000574294 CEP126Q9P2H0 1117 aa20.55■□□□□ 0.88
TVP23B-207ENST00000574294 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
TVP23B-207ENST00000574294 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
TVP23B-207ENST00000574294 HDLBPQ00341 1268 aaKnown RBP20.54■□□□□ 0.88
TVP23B-207ENST00000574294 CFAP100Q494V2 611 aa20.54■□□□□ 0.88
TVP23B-207ENST00000574294 ATG9AQ7Z3C6 839 aa20.54■□□□□ 0.88
TVP23B-207ENST00000574294 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
TVP23B-207ENST00000574294 SUGT1Q9Y2Z0 365 aa20.54■□□□□ 0.88
TVP23B-207ENST00000574294 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
TVP23B-207ENST00000574294 BCAR3O75815 825 aa20.53■□□□□ 0.88
TVP23B-207ENST00000574294 MTX1Q13505 466 aa20.53■□□□□ 0.88
TVP23B-207ENST00000574294 TTF2Q9UNY4 1162 aaKnown RBP20.53■□□□□ 0.88
TVP23B-207ENST00000574294 HSPA8P11142 646 aaKnown RBP20.52■□□□□ 0.88
TVP23B-207ENST00000574294 RBM5P52756 815 aaKnown RBP eCLIP20.52■□□□□ 0.88
TVP23B-207ENST00000574294 LBX1P52954 281 aa20.52■□□□□ 0.88
TVP23B-207ENST00000574294 TNFAIP1Q13829 316 aa20.52■□□□□ 0.88
TVP23B-207ENST00000574294 MRIQ9BWK5 157 aa20.52■□□□□ 0.88
TVP23B-207ENST00000574294 DEFB129Q9H1M3 183 aa20.52■□□□□ 0.88
TVP23B-207ENST00000574294 MAST3O60307 1309 aa20.52■□□□□ 0.87
TVP23B-207ENST00000574294 FAM155AB1AL88 458 aaPredicted RBP20.51■□□□□ 0.87
TVP23B-207ENST00000574294 GNAI2P04899 355 aa20.51■□□□□ 0.87
TVP23B-207ENST00000574294 SLC10A3P09131 477 aa20.51■□□□□ 0.87
TVP23B-207ENST00000574294 BCAMP50895 628 aa20.51■□□□□ 0.87
TVP23B-207ENST00000574294 ARMC9Q7Z3E5 817 aa20.51■□□□□ 0.87
TVP23B-207ENST00000574294 PRMT6Q96LA8 375 aaPredicted RBP20.51■□□□□ 0.87
TVP23B-207ENST00000574294 GNL3LQ9NVN8 582 aaKnown RBP20.51■□□□□ 0.87
TVP23B-207ENST00000574294 JAG2Q9Y219 1238 aa20.51■□□□□ 0.87
TVP23B-207ENST00000574294 UNCXA6NJT0 531 aa20.5■□□□□ 0.87
TVP23B-207ENST00000574294 ZBTB22O15209 634 aa20.5■□□□□ 0.87
TVP23B-207ENST00000574294 TTLL12Q14166 644 aaPredicted RBP20.5■□□□□ 0.87
TVP23B-207ENST00000574294 ATP2B3Q16720 1220 aa20.5■□□□□ 0.87
TVP23B-207ENST00000574294 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
TVP23B-207ENST00000574294 WDR66Q8TBY9 1149 aa20.5■□□□□ 0.87
TVP23B-207ENST00000574294 SIL1Q9H173 461 aa20.5■□□□□ 0.87
TVP23B-207ENST00000574294 MYH13Q9UKX3 1938 aa20.49■□□□□ 0.87
TVP23B-207ENST00000574294 SRGAP3O43295 1099 aa20.49■□□□□ 0.87
TVP23B-207ENST00000574294 CHAF1AQ13111 956 aaPredicted RBP20.49■□□□□ 0.87
TVP23B-207ENST00000574294 SEMA3EO15041 775 aa20.48■□□□□ 0.87
TVP23B-207ENST00000574294 PPP1R12BO60237 982 aaPredicted RBP20.48■□□□□ 0.87
TVP23B-207ENST00000574294 PRAMEF18Q5VWM3 479 aa20.48■□□□□ 0.87
TVP23B-207ENST00000574294 TEKT1Q969V4 418 aa20.48■□□□□ 0.87
TVP23B-207ENST00000574294 CLUAP1Q96AJ1 413 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms