RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 MKRN3Q13064 507 aaKnown RBP27.91■■■□□ 2.06
SNF8-216ENST00000573795 LDLRAD1Q5T700 205 aa27.91■■■□□ 2.06
SNF8-216ENST00000573795 TBC1D8O95759 1140 aa27.9■■■□□ 2.06
SNF8-216ENST00000573795 DLGAP5Q15398 846 aa27.9■■■□□ 2.06
SNF8-216ENST00000573795 ZNF804AQ7Z570 1209 aa27.9■■■□□ 2.06
SNF8-216ENST00000573795 LAMB1P07942 1786 aa27.9■■■□□ 2.06
SNF8-216ENST00000573795 FKBP1AP62942 108 aaKnown RBP27.89■■■□□ 2.06
SNF8-216ENST00000573795 CCDC57Q2TAC2 916 aa27.89■■■□□ 2.06
SNF8-216ENST00000573795 ARMC9Q7Z3E5 817 aa27.89■■■□□ 2.06
SNF8-216ENST00000573795 KAZALD1Q96I82 304 aa27.89■■■□□ 2.06
SNF8-216ENST00000573795 DEFB129Q9H1M3 183 aa27.89■■■□□ 2.06
SNF8-216ENST00000573795 JAG2Q9Y219 1238 aa27.89■■■□□ 2.06
SNF8-216ENST00000573795 ZNF316A6NFI3 1004 aaPredicted RBP27.88■■■□□ 2.05
SNF8-216ENST00000573795 F8W031 263 aaPredicted RBP27.88■■■□□ 2.05
SNF8-216ENST00000573795 ALDH1L1O75891 902 aa27.88■■■□□ 2.05
SNF8-216ENST00000573795 LDHAL6AQ6ZMR3 332 aa27.88■■■□□ 2.05
SNF8-216ENST00000573795 ZNF296Q8WUU4 475 aaPredicted RBP27.88■■■□□ 2.05
SNF8-216ENST00000573795 ARAP2Q8WZ64 1704 aa27.88■■■□□ 2.05
SNF8-216ENST00000573795 ANGEL1Q9UNK9 670 aaKnown RBP27.88■■■□□ 2.05
SNF8-216ENST00000573795 CFAP100Q494V2 611 aa27.87■■■□□ 2.05
SNF8-216ENST00000573795 SPDYE2BA6NHP3 402 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 PLIN1O60240 522 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 SPDYE6P0CI01 402 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 SOX10P56693 466 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 SPRYD7Q5W111 196 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 FAM9BQ8IZU0 186 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 SUCLG2Q96I99 432 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 PRMT6Q96LA8 375 aaPredicted RBP27.86■■■□□ 2.05
SNF8-216ENST00000573795 CNNM1Q9NRU3 951 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 C9orf78Q9NZ63 289 aaPredicted RBP27.86■■■□□ 2.05
SNF8-216ENST00000573795 ZNF521Q96K83 1311 aa27.86■■■□□ 2.05
SNF8-216ENST00000573795 CLRN2A0PK11 232 aa27.85■■■□□ 2.05
SNF8-216ENST00000573795 MAP3K11Q16584 847 aa27.85■■■□□ 2.05
SNF8-216ENST00000573795 TAF7LQ5H9L4 462 aa27.85■■■□□ 2.05
SNF8-216ENST00000573795 SLC4A10Q6U841 1118 aa27.85■■■□□ 2.05
SNF8-216ENST00000573795 SRCIN1Q9C0H9 1055 aa27.85■■■□□ 2.05
SNF8-216ENST00000573795 SREBF2Q12772 1141 aa27.84■■■□□ 2.05
SNF8-216ENST00000573795 NOM1Q5C9Z4 860 aaKnown RBP27.84■■■□□ 2.05
SNF8-216ENST00000573795 CFHR5Q9BXR6 569 aa27.84■■■□□ 2.05
SNF8-216ENST00000573795 PUS3Q9BZE2 481 aaKnown RBP27.84■■■□□ 2.05
SNF8-216ENST00000573795 R3HDMLQ9H3Y0 253 aa27.84■■■□□ 2.05
SNF8-216ENST00000573795 PPP2R3BQ9Y5P8 575 aa27.84■■■□□ 2.05
SNF8-216ENST00000573795 FAM205AQ6ZU69 1335 aa27.84■■■□□ 2.05
SNF8-216ENST00000573795 GPR25O00155 361 aa27.83■■■□□ 2.05
SNF8-216ENST00000573795 HPS5Q9UPZ3 1129 aa27.83■■■□□ 2.05
SNF8-216ENST00000573795 NBPF7P0C2Y1 421 aaPredicted RBP27.82■■■□□ 2.04
SNF8-216ENST00000573795 TDRD7Q8NHU6 1098 aaKnown RBP27.82■■■□□ 2.04
SNF8-216ENST00000573795 CLMNQ96JQ2 1002 aa27.82■■■□□ 2.04
SNF8-216ENST00000573795 UTYO14607 1347 aa27.82■■■□□ 2.04
SNF8-216ENST00000573795 OTOFQ9HC10 1997 aa27.82■■■□□ 2.04
SNF8-216ENST00000573795 UBE4AQ14139 1066 aa27.81■■■□□ 2.04
SNF8-216ENST00000573795 PDE4DIPQ5VU43 2346 aa27.81■■■□□ 2.04
SNF8-216ENST00000573795 ZEB1P37275 1124 aaPredicted RBP27.8■■■□□ 2.04
SNF8-216ENST00000573795 GYG1P46976 350 aa27.8■■■□□ 2.04
SNF8-216ENST00000573795 NBPF12Q5TAG4 269 aaPredicted RBP27.8■■■□□ 2.04
SNF8-216ENST00000573795 FAM84BQ96KN1 310 aaPredicted RBP27.8■■■□□ 2.04
SNF8-216ENST00000573795 VEZTQ9HBM0 779 aa27.8■■■□□ 2.04
SNF8-216ENST00000573795 HTTP42858 3142 aa27.8■■■□□ 2.04
SNF8-216ENST00000573795 MYO1BO43795 1136 aa27.79■■■□□ 2.04
SNF8-216ENST00000573795 RIPOR2Q9Y4F9 1068 aa27.79■■■□□ 2.04
SNF8-216ENST00000573795 PKN2Q16513 984 aaKnown RBP27.78■■■□□ 2.04
SNF8-216ENST00000573795 RABL6Q3YEC7 729 aaPredicted RBP27.78■■■□□ 2.04
SNF8-216ENST00000573795 MFSD14BQ5SR56 506 aa27.78■■■□□ 2.04
SNF8-216ENST00000573795 WNK4Q96J92 1243 aa27.78■■■□□ 2.04
SNF8-216ENST00000573795 PPP1R12BO60237 982 aaPredicted RBP27.77■■■□□ 2.04
SNF8-216ENST00000573795 SLC34A2O95436 690 aa27.77■■■□□ 2.04
SNF8-216ENST00000573795 HIBADHP31937 336 aaKnown RBP27.77■■■□□ 2.04
SNF8-216ENST00000573795 MRPL50Q8N5N7 158 aaKnown RBP27.77■■■□□ 2.04
SNF8-216ENST00000573795 ANKRD44Q8N8A2 993 aa27.77■■■□□ 2.04
SNF8-216ENST00000573795 SLC10A4Q96EP9 437 aa27.77■■■□□ 2.04
SNF8-216ENST00000573795 BICC1Q9H694 974 aaKnown RBP27.77■■■□□ 2.04
SNF8-216ENST00000573795 ZBTB48P10074 688 aaPredicted RBP27.76■■■□□ 2.03
SNF8-216ENST00000573795 RBM5P52756 815 aaKnown RBP eCLIP27.76■■■□□ 2.03
SNF8-216ENST00000573795 RASA3Q14644 834 aa27.76■■■□□ 2.03
SNF8-216ENST00000573795 MANSC4A6NHS7 340 aaPredicted RBP27.75■■■□□ 2.03
SNF8-216ENST00000573795 USP2O75604 605 aaPredicted RBP27.75■■■□□ 2.03
SNF8-216ENST00000573795 GJA5P36382 358 aa27.75■■■□□ 2.03
SNF8-216ENST00000573795 SUPT20HL1Q3ZLR7 823 aa27.75■■■□□ 2.03
SNF8-216ENST00000573795 SPDYE2Q495Y8 402 aa27.75■■■□□ 2.03
SNF8-216ENST00000573795 IFNL1Q8IU54 200 aa27.75■■■□□ 2.03
SNF8-216ENST00000573795 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.75■■■□□ 2.03
SNF8-216ENST00000573795 SERPINA10Q9UK55 444 aa27.75■■■□□ 2.03
SNF8-216ENST00000573795 TTF2Q9UNY4 1162 aaKnown RBP27.75■■■□□ 2.03
SNF8-216ENST00000573795 UNCXA6NJT0 531 aa27.74■■■□□ 2.03
SNF8-216ENST00000573795 IGF2BP3O00425 579 aaKnown RBP eCLIP27.74■■■□□ 2.03
SNF8-216ENST00000573795 FKTNO75072 461 aa27.74■■■□□ 2.03
SNF8-216ENST00000573795 GRIK5Q16478 980 aa27.74■■■□□ 2.03
SNF8-216ENST00000573795 LRRC24Q50LG9 513 aa27.74■■■□□ 2.03
SNF8-216ENST00000573795 CDAN1Q8IWY9 1227 aa27.74■■■□□ 2.03
SNF8-216ENST00000573795 ZNF70Q9UC06 446 aaPredicted RBP27.74■■■□□ 2.03
SNF8-216ENST00000573795 MROH5Q6ZUA9 1318 aa27.73■■■□□ 2.03
SNF8-216ENST00000573795 TDRD3Q9H7E2 651 aaKnown RBP27.73■■■□□ 2.03
SNF8-216ENST00000573795 ALDH1A1P00352 501 aa27.72■■■□□ 2.03
SNF8-216ENST00000573795 INHBEP58166 350 aa27.72■■■□□ 2.03
SNF8-216ENST00000573795 FBXO46Q6PJ61 603 aaPredicted RBP27.72■■■□□ 2.03
SNF8-216ENST00000573795 FBXO33Q7Z6M2 555 aa27.72■■■□□ 2.03
SNF8-216ENST00000573795 VGLL2Q8N8G2 317 aa27.72■■■□□ 2.03
SNF8-216ENST00000573795 TEPSINQ96N21 525 aa27.72■■■□□ 2.03
SNF8-216ENST00000573795 DZIP1LQ8IYY4 767 aaKnown RBP27.71■■■□□ 2.03
SNF8-216ENST00000573795 CRKP46108 304 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms