RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
NPLOC4-212ENST00000573328 CA12O43570 354 aa12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 GYG1P46976 350 aa12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 NOB1Q9ULX3 412 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-212ENST00000573328 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 MYO1BO43795 1136 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 SLC10A3P09131 477 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 FKBP1BP68106 108 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
NPLOC4-212ENST00000573328 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 KIF23Q02241 960 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 PRKG1Q13976 671 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 MFSD14BQ5SR56 506 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 VEZTQ9HBM0 779 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
NPLOC4-212ENST00000573328 OTOFQ9HC10 1997 aa12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 CLRN2A0PK11 232 aa12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 FAM155AB1AL88 458 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 UBE2Q2LH0YL09 131 aa12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 RASAL3Q86YV0 1011 aa12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 FAM205AQ6ZU69 1335 aa12.07□□□□□ -0.48
NPLOC4-212ENST00000573328 PDE8BO95263 885 aa12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 ARMC9Q7Z3E5 817 aa12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 SIL1Q9H173 461 aa12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
NPLOC4-212ENST00000573328 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 SLC5A1P13866 664 aa12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 VGLL2Q8N8G2 317 aa12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 LRRFIP2Q9Y608 721 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-212ENST00000573328 EYA2O00167 538 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 TRPA1O75762 1119 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 TNFAIP1Q13829 316 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 SAGE1Q9NXZ1 904 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 LAMB1P07942 1786 aa12.04□□□□□ -0.48
NPLOC4-212ENST00000573328 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 PPP1R12BO60237 982 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 RFX5P48382 616 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 BCAMP50895 628 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 PTPN12Q05209 780 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 FBXO33Q7Z6M2 555 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 MIER1Q8N108 512 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 MEIS3Q99687 375 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
NPLOC4-212ENST00000573328 SSC5DA1L4H1 1573 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 GNAI3P08754 354 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 CRKP46108 304 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 SUPT20HL1Q3ZLR7 823 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 DZIP1LQ8IYY4 767 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 LPIN2Q92539 896 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 TDRD3Q9H7E2 651 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 RNF186Q9NXI6 227 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms