RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HUNKP57058 714 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 ATG9AQ7Z3C6 839 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 FBXO33Q7Z6M2 555 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 MTMR14Q8NCE2 650 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 ARHGAP45Q92619 1136 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 API5Q9BZZ5 524 aaKnown RBP21.76■■□□□ 1.07
SMG6-212ENST00000573153 JAG2Q9Y219 1238 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 SSC5DA1L4H1 1573 aa21.75■■□□□ 1.07
SMG6-212ENST00000573153 MAP2K2P36507 400 aa21.75■■□□□ 1.07
SMG6-212ENST00000573153 MMP14P50281 582 aa21.75■■□□□ 1.07
SMG6-212ENST00000573153 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
SMG6-212ENST00000573153 MEIS3Q99687 375 aa21.75■■□□□ 1.07
SMG6-212ENST00000573153 BCAR3O75815 825 aa21.74■■□□□ 1.07
SMG6-212ENST00000573153 PDE8BO95263 885 aa21.74■■□□□ 1.07
SMG6-212ENST00000573153 MAP2K1Q02750 393 aaPredicted RBP21.74■■□□□ 1.07
SMG6-212ENST00000573153 PRAMEF18Q5VWM3 479 aa21.74■■□□□ 1.07
SMG6-212ENST00000573153 PRDM10Q9NQV6 1147 aa21.74■■□□□ 1.07
SMG6-212ENST00000573153 KIF16BQ96L93 1317 aa21.74■■□□□ 1.07
SMG6-212ENST00000573153 COL1A1P02452 1464 aaPredicted RBP21.73■■□□□ 1.07
SMG6-212ENST00000573153 TRIM27P14373 513 aa21.73■■□□□ 1.07
SMG6-212ENST00000573153 CTCFP49711 727 aaPredicted RBP21.73■■□□□ 1.07
SMG6-212ENST00000573153 GRM1Q13255 1194 aa21.73■■□□□ 1.07
SMG6-212ENST00000573153 GRIK5Q16478 980 aa21.73■■□□□ 1.07
SMG6-212ENST00000573153 PAXIP1Q6ZW49 1069 aaPredicted RBP21.73■■□□□ 1.07
SMG6-212ENST00000573153 OGFOD1Q8N543 542 aa21.73■■□□□ 1.07
SMG6-212ENST00000573153 EYA2O00167 538 aa21.72■■□□□ 1.07
SMG6-212ENST00000573153 HIBADHP31937 336 aaKnown RBP21.72■■□□□ 1.07
SMG6-212ENST00000573153 RGMBQ6NW40 437 aa21.72■■□□□ 1.07
SMG6-212ENST00000573153 MOB2Q70IA6 237 aa21.72■■□□□ 1.07
SMG6-212ENST00000573153 LRRFIP2Q9Y608 721 aaKnown RBP21.72■■□□□ 1.07
SMG6-212ENST00000573153 UBTFL1P0CB47 393 aaPredicted RBP21.71■■□□□ 1.07
SMG6-212ENST00000573153 LBX1P52954 281 aa21.71■■□□□ 1.07
SMG6-212ENST00000573153 METTL24Q5JXM2 366 aa21.71■■□□□ 1.07
SMG6-212ENST00000573153 C2orf69Q8N8R5 385 aa21.71■■□□□ 1.07
SMG6-212ENST00000573153 SPDYE2BA6NHP3 402 aa21.7■■□□□ 1.06
SMG6-212ENST00000573153 SLC10A3P09131 477 aa21.7■■□□□ 1.06
SMG6-212ENST00000573153 SPDYE6P0CI01 402 aa21.7■■□□□ 1.06
SMG6-212ENST00000573153 PRMT6Q96LA8 375 aaPredicted RBP21.7■■□□□ 1.06
SMG6-212ENST00000573153 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMG6-212ENST00000573153 CFAP100Q494V2 611 aa21.69■■□□□ 1.06
SMG6-212ENST00000573153 RASAL3Q86YV0 1011 aa21.69■■□□□ 1.06
SMG6-212ENST00000573153 HDAC9Q9UKV0 1011 aa21.69■■□□□ 1.06
SMG6-212ENST00000573153 F8W031 263 aaPredicted RBP21.68■■□□□ 1.06
SMG6-212ENST00000573153 FKBP1BP68106 108 aa21.68■■□□□ 1.06
SMG6-212ENST00000573153 NOGQ13253 232 aa21.68■■□□□ 1.06
SMG6-212ENST00000573153 MFSD14BQ5SR56 506 aa21.68■■□□□ 1.06
SMG6-212ENST00000573153 TNS4Q8IZW8 715 aa21.68■■□□□ 1.06
SMG6-212ENST00000573153 AIDAQ96BJ3 306 aa21.68■■□□□ 1.06
SMG6-212ENST00000573153 CIAO1O76071 339 aa21.67■■□□□ 1.06
SMG6-212ENST00000573153 BCAMP50895 628 aa21.67■■□□□ 1.06
SMG6-212ENST00000573153 MTX1Q13505 466 aa21.67■■□□□ 1.06
SMG6-212ENST00000573153 IQSEC3Q9UPP2 1182 aaPredicted RBP21.67■■□□□ 1.06
SMG6-212ENST00000573153 PA2G4Q9UQ80 394 aaKnown RBP21.67■■□□□ 1.06
SMG6-212ENST00000573153 PUM3Q15397 648 aaKnown RBP21.66■■□□□ 1.06
SMG6-212ENST00000573153 DLGAP5Q15398 846 aa21.66■■□□□ 1.06
SMG6-212ENST00000573153 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
SMG6-212ENST00000573153 APOBEC3FQ8IUX4 373 aaKnown RBP21.66■■□□□ 1.06
SMG6-212ENST00000573153 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
SMG6-212ENST00000573153 TSKSQ9UJT2 592 aa21.66■■□□□ 1.06
SMG6-212ENST00000573153 FBXO3Q9UK99 471 aa21.66■■□□□ 1.06
SMG6-212ENST00000573153 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.66■■□□□ 1.06
SMG6-212ENST00000573153 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
SMG6-212ENST00000573153 UBE2Q2LH0YL09 131 aa21.64■■□□□ 1.05
SMG6-212ENST00000573153 ZNF157P51786 506 aaPredicted RBP21.64■■□□□ 1.05
SMG6-212ENST00000573153 KIF23Q02241 960 aaPredicted RBP21.64■■□□□ 1.05
SMG6-212ENST00000573153 CCDC102AQ96A19 550 aa21.64■■□□□ 1.05
SMG6-212ENST00000573153 FZD1Q9UP38 647 aa21.64■■□□□ 1.05
SMG6-212ENST00000573153 LAMB1P07942 1786 aa21.64■■□□□ 1.05
SMG6-212ENST00000573153 CLRN2A0PK11 232 aa21.63■■□□□ 1.05
SMG6-212ENST00000573153 LDLRAD1Q5T700 205 aa21.63■■□□□ 1.05
SMG6-212ENST00000573153 SIL1Q9H173 461 aa21.63■■□□□ 1.05
SMG6-212ENST00000573153 DEFB129Q9H1M3 183 aa21.63■■□□□ 1.05
SMG6-212ENST00000573153 SERPINA10Q9UK55 444 aa21.63■■□□□ 1.05
SMG6-212ENST00000573153 TTF2Q9UNY4 1162 aaKnown RBP21.63■■□□□ 1.05
SMG6-212ENST00000573153 ZBTB22O15209 634 aa21.62■■□□□ 1.05
SMG6-212ENST00000573153 IPO8O15397 1037 aaKnown RBP21.62■■□□□ 1.05
SMG6-212ENST00000573153 MAP3K11Q16584 847 aa21.62■■□□□ 1.05
SMG6-212ENST00000573153 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
SMG6-212ENST00000573153 LPIN2Q92539 896 aa21.62■■□□□ 1.05
SMG6-212ENST00000573153 HDAC5Q9UQL6 1122 aa21.62■■□□□ 1.05
SMG6-212ENST00000573153 MYH13Q9UKX3 1938 aa21.61■■□□□ 1.05
SMG6-212ENST00000573153 CDAN1Q8IWY9 1227 aa21.61■■□□□ 1.05
SMG6-212ENST00000573153 TMEM57Q8N5G2 664 aa21.61■■□□□ 1.05
SMG6-212ENST00000573153 CLUAP1Q96AJ1 413 aa21.61■■□□□ 1.05
SMG6-212ENST00000573153 CSRNP1Q96S65 589 aa21.61■■□□□ 1.05
SMG6-212ENST00000573153 OTOFQ9HC10 1997 aa21.6■■□□□ 1.05
SMG6-212ENST00000573153 IFIT1P09914 478 aaKnown RBP21.6■■□□□ 1.05
SMG6-212ENST00000573153 CRKP46108 304 aa21.6■■□□□ 1.05
SMG6-212ENST00000573153 CHAF1AQ13111 956 aaPredicted RBP21.6■■□□□ 1.05
SMG6-212ENST00000573153 CAVIN4Q5BKX8 364 aa21.6■■□□□ 1.05
SMG6-212ENST00000573153 FRAT1Q92837 279 aaPredicted RBP21.6■■□□□ 1.05
SMG6-212ENST00000573153 TEPSINQ96N21 525 aa21.6■■□□□ 1.05
SMG6-212ENST00000573153 ZNF70Q9UC06 446 aaPredicted RBP21.6■■□□□ 1.05
SMG6-212ENST00000573153 PPP2R3BQ9Y5P8 575 aa21.6■■□□□ 1.05
SMG6-212ENST00000573153 CA12O43570 354 aa21.59■■□□□ 1.05
SMG6-212ENST00000573153 GNAI3P08754 354 aa21.59■■□□□ 1.05
SMG6-212ENST00000573153 RLBP1P12271 317 aa21.59■■□□□ 1.05
SMG6-212ENST00000573153 IL15P40933 162 aaPredicted RBP21.59■■□□□ 1.05
SMG6-212ENST00000573153 ATP2B3Q16720 1220 aa21.59■■□□□ 1.05
SMG6-212ENST00000573153 DZIP1LQ8IYY4 767 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms