RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
ATP2A3-211ENST00000572176 MRPL50Q8N5N7 158 aaKnown RBP16.27■□□□□ 0.2
ATP2A3-211ENST00000572176 MTMR14Q8NCE2 650 aa16.27■□□□□ 0.2
ATP2A3-211ENST00000572176 E9PSI1 815 aa16.26■□□□□ 0.19
ATP2A3-211ENST00000572176 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
ATP2A3-211ENST00000572176 TRPA1O75762 1119 aa16.26■□□□□ 0.19
ATP2A3-211ENST00000572176 NF2P35240 595 aa16.26■□□□□ 0.19
ATP2A3-211ENST00000572176 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
ATP2A3-211ENST00000572176 PTPRCP08575 1304 aa16.25■□□□□ 0.19
ATP2A3-211ENST00000572176 DGKZQ13574 1117 aa16.25■□□□□ 0.19
ATP2A3-211ENST00000572176 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
ATP2A3-211ENST00000572176 TTLL12Q14166 644 aaPredicted RBP16.25■□□□□ 0.19
ATP2A3-211ENST00000572176 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
ATP2A3-211ENST00000572176 SSC5DA1L4H1 1573 aa16.25■□□□□ 0.19
ATP2A3-211ENST00000572176 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 PLIN1O60240 522 aa16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 PCDHAC2Q9Y5I4 1007 aa16.24■□□□□ 0.19
ATP2A3-211ENST00000572176 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 F8W031 263 aaPredicted RBP16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 SLFN5Q08AF3 891 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 DEFB129Q9H1M3 183 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 RIPOR2Q9Y4F9 1068 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 PPP2R3BQ9Y5P8 575 aa16.23■□□□□ 0.19
ATP2A3-211ENST00000572176 MROH5Q6ZUA9 1318 aa16.22■□□□□ 0.19
ATP2A3-211ENST00000572176 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
ATP2A3-211ENST00000572176 CFAP100Q494V2 611 aa16.22■□□□□ 0.19
ATP2A3-211ENST00000572176 ARMC9Q7Z3E5 817 aa16.22■□□□□ 0.19
ATP2A3-211ENST00000572176 FAM84BQ96KN1 310 aaPredicted RBP16.22■□□□□ 0.19
ATP2A3-211ENST00000572176 AOX1Q06278 1338 aa16.21■□□□□ 0.19
ATP2A3-211ENST00000572176 LAMB1P07942 1786 aa16.21■□□□□ 0.19
ATP2A3-211ENST00000572176 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
ATP2A3-211ENST00000572176 GYG1P46976 350 aa16.21■□□□□ 0.19
ATP2A3-211ENST00000572176 LDLRAD1Q5T700 205 aa16.21■□□□□ 0.19
ATP2A3-211ENST00000572176 PRMT6Q96LA8 375 aaPredicted RBP16.21■□□□□ 0.19
ATP2A3-211ENST00000572176 CLRN2A0PK11 232 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 MYO1BO43795 1136 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 TM4SF4P48230 202 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 RGS19P49795 217 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 PRKG1Q13976 671 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 MAP3K11Q16584 847 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 MFSD14BQ5SR56 506 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 VGLL2Q8N8G2 317 aa16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 ANGEL1Q9UNK9 670 aaKnown RBP16.2■□□□□ 0.18
ATP2A3-211ENST00000572176 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
ATP2A3-211ENST00000572176 LRRC24Q50LG9 513 aa16.19■□□□□ 0.18
ATP2A3-211ENST00000572176 USP44Q9H0E7 712 aa16.19■□□□□ 0.18
ATP2A3-211ENST00000572176 FZD1Q9UP38 647 aa16.19■□□□□ 0.18
ATP2A3-211ENST00000572176 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 FBXO33Q7Z6M2 555 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 VEZTQ9HBM0 779 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 SERPINA10Q9UK55 444 aa16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 TTF2Q9UNY4 1162 aaKnown RBP16.18■□□□□ 0.18
ATP2A3-211ENST00000572176 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 RBM5P52756 815 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 NOM1Q5C9Z4 860 aaKnown RBP16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 METTL24Q5JXM2 366 aa16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 CTU1Q7Z7A3 348 aaKnown RBP16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 TRMT2AQ8IZ69 625 aaKnown RBP16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
ATP2A3-211ENST00000572176 UNCXA6NJT0 531 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 PDE8BO95263 885 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 RASA3Q14644 834 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 SUPT20HL1Q3ZLR7 823 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 NBPF12Q5TAG4 269 aaPredicted RBP16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 SMC4Q9NTJ3 1288 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 KIF16BQ96L93 1317 aa16.16■□□□□ 0.18
ATP2A3-211ENST00000572176 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 CT47B1P0C2W7 299 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 MLLT1Q03111 559 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 TNFAIP1Q13829 316 aa16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 CLMNQ96JQ2 1002 aa16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 ZNF70Q9UC06 446 aaPredicted RBP16.15■□□□□ 0.18
ATP2A3-211ENST00000572176 FGFR2P21802 821 aa16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 CRKP46108 304 aa16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 GRIK5Q16478 980 aa16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 CAVIN4Q5BKX8 364 aa16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 TBC1D22AQ8WUA7 517 aa16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 WNK4Q96J92 1243 aa16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
ATP2A3-211ENST00000572176 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 285.5 ms