RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TTLL5Q6EMB2 1281 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 DLK2Q6UY11 383 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 ZNF804AQ7Z570 1209 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
SMG6-209ENST00000571442 SMC1BQ8NDV3 1235 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 AKAP11Q9UKA4 1901 aa8.66□□□□□ -1.02
SMG6-209ENST00000571442 MYO5AQ9Y4I1 1855 aaKnown RBP8.66□□□□□ -1.02
SMG6-209ENST00000571442 FAM205AQ6ZU69 1335 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 IQCA1LA6NCM1 817 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 ZNF280AP59817 542 aaPredicted RBP8.65□□□□□ -1.02
SMG6-209ENST00000571442 HTRA3P83110 453 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 CHAF1AQ13111 956 aaPredicted RBP8.65□□□□□ -1.02
SMG6-209ENST00000571442 SCARF1Q14162 830 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 TBC1D10BQ4KMP7 808 aaPredicted RBP8.65□□□□□ -1.02
SMG6-209ENST00000571442 TNNI3KQ59H18 835 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 RBM26Q5T8P6 1007 aaKnown RBP8.65□□□□□ -1.02
SMG6-209ENST00000571442 CCDC102BQ68D86 513 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 PI16Q6UXB8 463 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 KIAA0825Q8IV33 1275 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 DPF2Q92785 391 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 EAF2Q96CJ1 260 aaPredicted RBP8.65□□□□□ -1.02
SMG6-209ENST00000571442 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 IL1RAPL2Q9NP60 686 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 SCAF8Q9UPN6 1271 aaKnown RBP8.65□□□□□ -1.02
SMG6-209ENST00000571442 FPGT-TNNI3KV9GXZ4 949 aa8.65□□□□□ -1.02
SMG6-209ENST00000571442 F8W031 263 aaPredicted RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 APBB1O00213 710 aa8.64□□□□□ -1.03
SMG6-209ENST00000571442 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 RPS12P25398 132 aaKnown RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 MAP1SQ66K74 1059 aaPredicted RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 AGBL3Q8NEM8 1001 aa8.64□□□□□ -1.03
SMG6-209ENST00000571442 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
SMG6-209ENST00000571442 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
SMG6-209ENST00000571442 NEUROD6Q96NK8 337 aa8.64□□□□□ -1.03
SMG6-209ENST00000571442 CCDC8Q9H0W5 538 aaPredicted RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 ADARB2Q9NS39 739 aaKnown RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 DBNLQ9UJU6 430 aaKnown RBP8.64□□□□□ -1.03
SMG6-209ENST00000571442 ITGBL1O95965 494 aaPredicted RBP8.63□□□□□ -1.03
SMG6-209ENST00000571442 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
SMG6-209ENST00000571442 RASGRF1Q13972 1273 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 KIF4BQ2VIQ3 1234 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 NBPF9Q3BBW0 867 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 CAVIN4Q5BKX8 364 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 MFSD14BQ5SR56 506 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 LDHDQ86WU2 507 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 DNAJC5GQ8N7S2 189 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 ZBED3Q96IU2 234 aaPredicted RBP8.63□□□□□ -1.03
SMG6-209ENST00000571442 GPR108Q9NPR9 543 aa8.63□□□□□ -1.03
SMG6-209ENST00000571442 PCNTO95613 3336 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 H7C1D1 291 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 TRAF5O00463 557 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 MCAMP43121 646 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 FKBP1AP62942 108 aaKnown RBP8.62□□□□□ -1.03
SMG6-209ENST00000571442 CHADLQ6NUI6 762 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 USP50Q70EL3 339 aaPredicted RBP8.62□□□□□ -1.03
SMG6-209ENST00000571442 VPS37DQ86XT2 251 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
SMG6-209ENST00000571442 DCTPP1Q9H773 170 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 MYOZ2Q9NPC6 264 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 HMG20BQ9P0W2 317 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 PGAP2Q9UHJ9 254 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 NDUFB9Q9Y6M9 179 aa8.62□□□□□ -1.03
SMG6-209ENST00000571442 ECM29Q5VYK3 1845 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 MYO3BQ8WXR4 1341 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 PASKQ96RG2 1323 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 WNT10BO00744 389 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 HMMRO75330 724 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 IGHDP01880 384 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 ARID4AP29374 1257 aaPredicted RBP8.61□□□□□ -1.03
SMG6-209ENST00000571442 PRDX5P30044 214 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 AACSQ86V21 672 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 PNMA8AQ86V59 439 aaPredicted RBP8.61□□□□□ -1.03
SMG6-209ENST00000571442 CNTROBQ8N137 903 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 ZNF384Q8TF68 577 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 KIF1BPQ96EK5 621 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 PRMT6Q96LA8 375 aaPredicted RBP8.61□□□□□ -1.03
SMG6-209ENST00000571442 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 CHMP4BQ9H444 224 aaKnown RBP8.61□□□□□ -1.03
SMG6-209ENST00000571442 SNRKQ9NRH2 765 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 TTF2Q9UNY4 1162 aaKnown RBP8.61□□□□□ -1.03
SMG6-209ENST00000571442 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
SMG6-209ENST00000571442 TRPM7Q96QT4 1865 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 ADM5C9JUS6 153 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 ZBTB22O15209 634 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 FRAT2O75474 233 aaPredicted RBP8.6□□□□□ -1.03
SMG6-209ENST00000571442 CFAP100Q494V2 611 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 ANGEL2Q5VTE6 544 aaKnown RBP8.6□□□□□ -1.03
SMG6-209ENST00000571442 JMYQ8N9B5 988 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 OTUD7AQ8TE49 926 aaPredicted RBP8.6□□□□□ -1.03
SMG6-209ENST00000571442 GGA3Q9NZ52 723 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 MYH2Q9UKX2 1941 aa8.6□□□□□ -1.03
SMG6-209ENST00000571442 CLRN2A0PK11 232 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 ZAP70P43403 619 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 CRKP46108 304 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms