RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 AOX1Q06278 1338 aa10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 IRS2Q9Y4H2 1338 aa10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 CCDC57Q2TAC2 916 aa10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 LDHAL6AQ6ZMR3 332 aa10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 ARMC9Q7Z3E5 817 aa10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 APOBEC3FQ8IUX4 373 aaKnown RBP10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 ZBED3Q96IU2 234 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 DEFB129Q9H1M3 183 aa10.92□□□□□ -0.66
CTDNEP1-203ENST00000570385 RBM5P52756 815 aaKnown RBP eCLIP10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 CFAP100Q494V2 611 aa10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 ZNF804AQ7Z570 1209 aa10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 CTU1Q7Z7A3 348 aaKnown RBP10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 ZNF296Q8WUU4 475 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 PRMT6Q96LA8 375 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 PUS3Q9BZE2 481 aaKnown RBP10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 R3HDMLQ9H3Y0 253 aa10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 VEZTQ9HBM0 779 aa10.91□□□□□ -0.66
CTDNEP1-203ENST00000570385 IL1R1P14778 569 aa10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 GYG1P46976 350 aa10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 C15orf52Q6ZUT6 534 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 SUCLG2Q96I99 432 aa10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 CLMNQ96JQ2 1002 aa10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 SRCIN1Q9C0H9 1055 aa10.9□□□□□ -0.66
CTDNEP1-203ENST00000570385 NBPF7P0C2Y1 421 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 TM4SF4P48230 202 aa10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 LDLRAD1Q5T700 205 aa10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 NBPF12Q5TAG4 269 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 KAZALD1Q96I82 304 aa10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 IQSEC3Q9UPP2 1182 aaPredicted RBP10.89□□□□□ -0.67
CTDNEP1-203ENST00000570385 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 GPR25O00155 361 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 MYO1BO43795 1136 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 ALDH1L1O75891 902 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 MMP14P50281 582 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 MFSD14BQ5SR56 506 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 A0A1B0GUL6 1792 aa10.88□□□□□ -0.67
CTDNEP1-203ENST00000570385 SSC5DA1L4H1 1573 aa10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 PPP1R12BO60237 982 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 HIBADHP31937 336 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 ZEB1P37275 1124 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 SREBF2Q12772 1141 aa10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 RASA3Q14644 834 aa10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 GRIK5Q16478 980 aa10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 MTMR14Q8NCE2 650 aa10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 FAM84BQ96KN1 310 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 BICC1Q9H694 974 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-203ENST00000570385 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 CHAF1AQ13111 956 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 UBE4AQ14139 1066 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 SUPT20HL1Q3ZLR7 823 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 CDAN1Q8IWY9 1227 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 WNK4Q96J92 1243 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 ZNF70Q9UC06 446 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
CTDNEP1-203ENST00000570385 FAM205AQ6ZU69 1335 aa10.85□□□□□ -0.67
CTDNEP1-203ENST00000570385 TCP10L2B9ZVM9 353 aa10.85□□□□□ -0.67
CTDNEP1-203ENST00000570385 FKTNO75072 461 aa10.85□□□□□ -0.67
CTDNEP1-203ENST00000570385 FKBP1AP62942 108 aaKnown RBP10.85□□□□□ -0.67
CTDNEP1-203ENST00000570385 VPS37DQ86XT2 251 aa10.85□□□□□ -0.67
CTDNEP1-203ENST00000570385 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
CTDNEP1-203ENST00000570385 MANSC4A6NHS7 340 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 IGF2BP3O00425 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 FRAT2O75474 233 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 GJA5P36382 358 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 CRKP46108 304 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 IREB2P48200 963 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 CACNB3P54284 484 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 MAP3K11Q16584 847 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 SPDYE2Q495Y8 402 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 METTL24Q5JXM2 366 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 DZIP1LQ8IYY4 767 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 ANKRD44Q8N8A2 993 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 SSH1Q8WYL5 1049 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 TMEM39BQ9GZU3 492 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 COL1A1P02452 1464 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 MROH5Q6ZUA9 1318 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 ZNF521Q96K83 1311 aa10.84□□□□□ -0.67
CTDNEP1-203ENST00000570385 BCAMP50895 628 aa10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 PKN2Q16513 984 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 FBXO33Q7Z6M2 555 aa10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 CNKSR2Q8WXI2 1034 aa10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 SERPINA10Q9UK55 444 aa10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 ECM29Q5VYK3 1845 aa10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 UTYO14607 1347 aa10.83□□□□□ -0.68
CTDNEP1-203ENST00000570385 KIAA0100Q14667 2235 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 ALDH1A1P00352 501 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms