RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 RGS19P49795 217 aa17.29■□□□□ 0.36
CNOT1-215ENST00000569020 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
CNOT1-215ENST00000569020 ARMC9Q7Z3E5 817 aa17.29■□□□□ 0.36
CNOT1-215ENST00000569020 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
CNOT1-215ENST00000569020 PLIN1O60240 522 aa17.28■□□□□ 0.36
CNOT1-215ENST00000569020 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
CNOT1-215ENST00000569020 ZBED3Q96IU2 234 aaPredicted RBP17.28■□□□□ 0.36
CNOT1-215ENST00000569020 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
CNOT1-215ENST00000569020 MYO1BO43795 1136 aa17.27■□□□□ 0.36
CNOT1-215ENST00000569020 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
CNOT1-215ENST00000569020 PRKG1Q13976 671 aa17.27■□□□□ 0.36
CNOT1-215ENST00000569020 CERS5Q8N5B7 392 aa17.27■□□□□ 0.36
CNOT1-215ENST00000569020 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
CNOT1-215ENST00000569020 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
CNOT1-215ENST00000569020 ANGEL1Q9UNK9 670 aaKnown RBP17.26■□□□□ 0.35
CNOT1-215ENST00000569020 ARAP2Q8WZ64 1704 aa17.26■□□□□ 0.35
CNOT1-215ENST00000569020 TM4SF4P48230 202 aa17.25■□□□□ 0.35
CNOT1-215ENST00000569020 SREBF2Q12772 1141 aa17.25■□□□□ 0.35
CNOT1-215ENST00000569020 CFAP100Q494V2 611 aa17.25■□□□□ 0.35
CNOT1-215ENST00000569020 CTU1Q7Z7A3 348 aaKnown RBP17.25■□□□□ 0.35
CNOT1-215ENST00000569020 DEFB129Q9H1M3 183 aa17.25■□□□□ 0.35
CNOT1-215ENST00000569020 PPP2R3BQ9Y5P8 575 aa17.25■□□□□ 0.35
CNOT1-215ENST00000569020 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
CNOT1-215ENST00000569020 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
CNOT1-215ENST00000569020 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
CNOT1-215ENST00000569020 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
CNOT1-215ENST00000569020 LAMB1P07942 1786 aa17.23■□□□□ 0.35
CNOT1-215ENST00000569020 TBC1D8O95759 1140 aa17.23■□□□□ 0.35
CNOT1-215ENST00000569020 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
CNOT1-215ENST00000569020 JAG2Q9Y219 1238 aa17.23■□□□□ 0.35
CNOT1-215ENST00000569020 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
CNOT1-215ENST00000569020 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
CNOT1-215ENST00000569020 PPP1R12BO60237 982 aaPredicted RBP17.22■□□□□ 0.35
CNOT1-215ENST00000569020 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
CNOT1-215ENST00000569020 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
CNOT1-215ENST00000569020 LDLRAD1Q5T700 205 aa17.22■□□□□ 0.35
CNOT1-215ENST00000569020 PRMT6Q96LA8 375 aaPredicted RBP17.22■□□□□ 0.35
CNOT1-215ENST00000569020 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
CNOT1-215ENST00000569020 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
CNOT1-215ENST00000569020 UTYO14607 1347 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
CNOT1-215ENST00000569020 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
CNOT1-215ENST00000569020 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 SUPT20HL1Q3ZLR7 823 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
CNOT1-215ENST00000569020 ZNF296Q8WUU4 475 aaPredicted RBP17.21■□□□□ 0.35
CNOT1-215ENST00000569020 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
CNOT1-215ENST00000569020 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
CNOT1-215ENST00000569020 PTPRCP08575 1304 aa17.21■□□□□ 0.34
CNOT1-215ENST00000569020 GYG1P46976 350 aa17.2■□□□□ 0.34
CNOT1-215ENST00000569020 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
CNOT1-215ENST00000569020 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
CNOT1-215ENST00000569020 SLC10A4Q96EP9 437 aa17.2■□□□□ 0.34
CNOT1-215ENST00000569020 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
CNOT1-215ENST00000569020 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
CNOT1-215ENST00000569020 MANSC4A6NHS7 340 aaPredicted RBP17.19■□□□□ 0.34
CNOT1-215ENST00000569020 UNCXA6NJT0 531 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 GPR25O00155 361 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 ALDH1A1P00352 501 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 INHBEP58166 350 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 RABL6Q3YEC7 729 aaPredicted RBP17.19■□□□□ 0.34
CNOT1-215ENST00000569020 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
CNOT1-215ENST00000569020 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
CNOT1-215ENST00000569020 TTF2Q9UNY4 1162 aaKnown RBP17.19■□□□□ 0.34
CNOT1-215ENST00000569020 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 SSC5DA1L4H1 1573 aa17.19■□□□□ 0.34
CNOT1-215ENST00000569020 MYH13Q9UKX3 1938 aa17.18■□□□□ 0.34
CNOT1-215ENST00000569020 E9PSI1 815 aa17.18■□□□□ 0.34
CNOT1-215ENST00000569020 ZBTB48P10074 688 aaPredicted RBP17.18■□□□□ 0.34
CNOT1-215ENST00000569020 IREB2P48200 963 aaKnown RBP17.18■□□□□ 0.34
CNOT1-215ENST00000569020 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
CNOT1-215ENST00000569020 CFHR5Q9BXR6 569 aa17.18■□□□□ 0.34
CNOT1-215ENST00000569020 SERPINA10Q9UK55 444 aa17.18■□□□□ 0.34
CNOT1-215ENST00000569020 OTOFQ9HC10 1997 aa17.17■□□□□ 0.34
CNOT1-215ENST00000569020 RASA3Q14644 834 aa17.17■□□□□ 0.34
CNOT1-215ENST00000569020 CAVIN4Q5BKX8 364 aa17.17■□□□□ 0.34
CNOT1-215ENST00000569020 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
CNOT1-215ENST00000569020 NBPF12Q5TAG4 269 aaPredicted RBP17.17■□□□□ 0.34
CNOT1-215ENST00000569020 FKTNO75072 461 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
CNOT1-215ENST00000569020 SOX10P56693 466 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 WNK4Q96J92 1243 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 TDRD3Q9H7E2 651 aaKnown RBP17.16■□□□□ 0.34
CNOT1-215ENST00000569020 ZNF70Q9UC06 446 aaPredicted RBP17.16■□□□□ 0.34
CNOT1-215ENST00000569020 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
CNOT1-215ENST00000569020 USP2O75604 605 aaPredicted RBP17.15■□□□□ 0.34
CNOT1-215ENST00000569020 PDE8BO95263 885 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 TNNI2P48788 182 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 IFNL1Q8IU54 200 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 ANKRD13AQ8IZ07 590 aa17.15■□□□□ 0.34
CNOT1-215ENST00000569020 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms