RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 DACT2Q5SW24 774 aa20.51■□□□□ 0.87
COMMD4-224ENST00000568877 CHD1LQ86WJ1 897 aa20.51■□□□□ 0.87
COMMD4-224ENST00000568877 C16orf71Q8IYS4 520 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-224ENST00000568877 ZNF512BQ96KM6 892 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-224ENST00000568877 DENND2AQ9ULE3 1009 aa20.51■□□□□ 0.87
COMMD4-224ENST00000568877 KDM2BQ8NHM5 1336 aa20.51■□□□□ 0.87
COMMD4-224ENST00000568877 CHAF1AQ13111 956 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-224ENST00000568877 RASGRF1Q13972 1273 aa20.5■□□□□ 0.87
COMMD4-224ENST00000568877 CENPQQ7L2Z9 268 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-224ENST00000568877 LNPKQ9C0E8 428 aa20.5■□□□□ 0.87
COMMD4-224ENST00000568877 JAG2Q9Y219 1238 aa20.5■□□□□ 0.87
COMMD4-224ENST00000568877 SCN9AQ15858 1988 aa20.49■□□□□ 0.87
COMMD4-224ENST00000568877 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
COMMD4-224ENST00000568877 FKBP1AP62942 108 aaKnown RBP20.48■□□□□ 0.87
COMMD4-224ENST00000568877 SCARF1Q14162 830 aa20.48■□□□□ 0.87
COMMD4-224ENST00000568877 MXD3Q9BW11 206 aa20.48■□□□□ 0.87
COMMD4-224ENST00000568877 HMG20BQ9P0W2 317 aa20.48■□□□□ 0.87
COMMD4-224ENST00000568877 ZBTB12Q9Y330 459 aaPredicted RBP20.48■□□□□ 0.87
COMMD4-224ENST00000568877 PDS5AQ29RF7 1337 aaKnown RBP20.48■□□□□ 0.87
COMMD4-224ENST00000568877 RPS12P25398 132 aaKnown RBP20.47■□□□□ 0.87
COMMD4-224ENST00000568877 YY1P25490 414 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 MCAMP43121 646 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-224ENST00000568877 SPATA5Q8NB90 893 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 AGBL3Q8NEM8 1001 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 WDR66Q8TBY9 1149 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 OTUD7AQ8TE49 926 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-224ENST00000568877 TBC1D22AQ8WUA7 517 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 GPATCH3Q96I76 525 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 ECHDC1Q9NTX5 307 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 COL1A1P02452 1464 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-224ENST00000568877 MYO3BQ8WXR4 1341 aa20.47■□□□□ 0.87
COMMD4-224ENST00000568877 MFSD14BQ5SR56 506 aa20.46■□□□□ 0.87
COMMD4-224ENST00000568877 PI16Q6UXB8 463 aa20.46■□□□□ 0.87
COMMD4-224ENST00000568877 CERS5Q8N5B7 392 aa20.46■□□□□ 0.87
COMMD4-224ENST00000568877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.46■□□□□ 0.87
COMMD4-224ENST00000568877 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-224ENST00000568877 GMLQ99445 158 aa20.46■□□□□ 0.87
COMMD4-224ENST00000568877 ATP5JP18859 108 aa20.45■□□□□ 0.86
COMMD4-224ENST00000568877 MX1P20591 662 aa20.45■□□□□ 0.86
COMMD4-224ENST00000568877 DPF2Q92785 391 aa20.45■□□□□ 0.86
COMMD4-224ENST00000568877 SNRKQ9NRH2 765 aa20.45■□□□□ 0.86
COMMD4-224ENST00000568877 PSME4Q14997 1843 aa20.45■□□□□ 0.86
COMMD4-224ENST00000568877 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
COMMD4-224ENST00000568877 SCNN1DP51172 638 aa20.44■□□□□ 0.86
COMMD4-224ENST00000568877 ZNF526Q8TF50 670 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-224ENST00000568877 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
COMMD4-224ENST00000568877 SALL1Q9NSC2 1324 aa20.44■□□□□ 0.86
COMMD4-224ENST00000568877 ZAP70P43403 619 aa20.43■□□□□ 0.86
COMMD4-224ENST00000568877 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
COMMD4-224ENST00000568877 ZGPATQ8N5A5 531 aaKnown RBP20.43■□□□□ 0.86
COMMD4-224ENST00000568877 BOLA2Q9H3K6 86 aa20.43■□□□□ 0.86
COMMD4-224ENST00000568877 GPRC5DQ9NZD1 345 aa20.43■□□□□ 0.86
COMMD4-224ENST00000568877 STAP2Q9UGK3 403 aa20.43■□□□□ 0.86
COMMD4-224ENST00000568877 ZNF646O15015 1829 aaPredicted RBP20.43■□□□□ 0.86
COMMD4-224ENST00000568877 USP17L8P0C7I0 530 aa20.42■□□□□ 0.86
COMMD4-224ENST00000568877 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-224ENST00000568877 GRIK5Q16478 980 aa20.42■□□□□ 0.86
COMMD4-224ENST00000568877 KIAA0825Q8IV33 1275 aa20.42■□□□□ 0.86
COMMD4-224ENST00000568877 CNOT7Q9UIV1 285 aaKnown RBP20.42■□□□□ 0.86
COMMD4-224ENST00000568877 SUGT1Q9Y2Z0 365 aa20.42■□□□□ 0.86
COMMD4-224ENST00000568877 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 POTECB2RU33 542 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 ERC2O15083 957 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 CYP2E1P05181 493 aaPredicted RBP20.41■□□□□ 0.86
COMMD4-224ENST00000568877 PDE1AP54750 535 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 MICALL2Q8IY33 904 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 HAUS7Q99871 368 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 ABCF2Q9UG63 623 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 NDUFB9Q9Y6M9 179 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 WDR90Q96KV7 1748 aa20.41■□□□□ 0.86
COMMD4-224ENST00000568877 F8W031 263 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-224ENST00000568877 H7C1D1 291 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 PDE4AP27815 886 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 EPS15P42566 896 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 MMP14P50281 582 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 SPTY2D1Q68D10 685 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-224ENST00000568877 TBC1D9Q6ZT07 1266 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 OGFOD1Q8N543 542 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 PI4K2BQ8TCG2 481 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 DNAJC2Q99543 621 aaKnown RBP20.4■□□□□ 0.86
COMMD4-224ENST00000568877 HACL1Q9UJ83 578 aa20.4■□□□□ 0.86
COMMD4-224ENST00000568877 TTF2Q9UNY4 1162 aaKnown RBP20.4■□□□□ 0.86
COMMD4-224ENST00000568877 MYH13Q9UKX3 1938 aa20.39■□□□□ 0.86
COMMD4-224ENST00000568877 SHTN1A0MZ66 631 aa20.39■□□□□ 0.85
COMMD4-224ENST00000568877 GLRX3O76003 335 aaKnown RBP20.39■□□□□ 0.85
COMMD4-224ENST00000568877 LDHBP07195 334 aaKnown RBP20.39■□□□□ 0.85
COMMD4-224ENST00000568877 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
COMMD4-224ENST00000568877 PRDX5P30044 214 aa20.39■□□□□ 0.85
COMMD4-224ENST00000568877 ZNF280AP59817 542 aaPredicted RBP20.39■□□□□ 0.85
COMMD4-224ENST00000568877 GPBP1L1Q9HC44 474 aaPredicted RBP20.39■□□□□ 0.85
COMMD4-224ENST00000568877 NMRK2Q9NPI5 230 aa20.39■□□□□ 0.85
COMMD4-224ENST00000568877 HDAC9Q9UKV0 1011 aa20.39■□□□□ 0.85
COMMD4-224ENST00000568877 AKAP11Q9UKA4 1901 aa20.38■□□□□ 0.85
COMMD4-224ENST00000568877 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
COMMD4-224ENST00000568877 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
COMMD4-224ENST00000568877 ANTXR1Q9H6X2 564 aa20.38■□□□□ 0.85
COMMD4-224ENST00000568877 PIH1D3Q9NQM4 214 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms