RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 XAGE2Q96GT9 111 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
CDH13-211ENST00000568770 WWC3Q9ULE0 1092 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 KIF13BQ9NQT8 1826 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 MEGF6O75095 1541 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 ROCK2O75116 1388 aaKnown RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 EDC4Q6P2E9 1401 aaKnown RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 TMEM88BA6NKF7 163 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 MEN1O00255 615 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 CTSOP43234 321 aaPredicted RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 TSEN2Q8NCE0 465 aaKnown RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 GAS2L2Q8NHY3 880 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 ZCRB1Q8TBF4 217 aaKnown RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 FAM200AQ8TCP9 573 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 CNKSR1Q969H4 720 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 PURBQ96QR8 312 aaKnown RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
CDH13-211ENST00000568770 KIAA1551Q9HCM1 1747 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 IGSF1Q8N6C5 1336 aa7.97□□□□□ -1.13
CDH13-211ENST00000568770 BRCA1P38398 1863 aaKnown RBP7.96□□□□□ -1.13
CDH13-211ENST00000568770 SPINT1O43278 529 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 BMP2P12643 396 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 SEC13P55735 322 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 CLN3Q13286 438 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 HDGFL2Q7Z4V5 671 aaPredicted RBP7.96□□□□□ -1.14
CDH13-211ENST00000568770 TNS4Q8IZW8 715 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 ZFP42Q96MM3 310 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 ESYT1Q9BSJ8 1104 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 SLC12A5Q9H2X9 1139 aa7.96□□□□□ -1.14
CDH13-211ENST00000568770 MAP2P11137 1827 aaKnown RBP7.96□□□□□ -1.14
CDH13-211ENST00000568770 CICQ96RK0 1608 aaPredicted RBP7.96□□□□□ -1.14
CDH13-211ENST00000568770 CENPCQ03188 943 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 Q6ZNB5 142 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 DNAJC5GQ8N7S2 189 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 FLAD1Q8NFF5 587 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 ATP13A2Q9NQ11 1180 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 USP3Q9Y6I4 520 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 A0A1W2PP64 1363 aa7.95□□□□□ -1.14
CDH13-211ENST00000568770 FBLN1P23142 703 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 HOXC9P31274 260 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 EPHA4P54764 986 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
CDH13-211ENST00000568770 AMIGO3Q86WK7 504 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 MAP3K19Q56UN5 1328 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
CDH13-211ENST00000568770 PKD1L3Q7Z443 1732 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 TOMM70O94826 608 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 AMPHP49418 695 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 SMTNP53814 917 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 TBCELQ5QJ74 424 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 NBPF6Q5VWK0 638 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 MPRIPQ6WCQ1 1025 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 SMIM5Q71RC9 77 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 USHBP1Q8N6Y0 703 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 NBPF4Q96M43 638 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 TERF2IPQ9NYB0 399 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 KIF20BQ96Q89 1820 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 SBF1O95248 1867 aa7.93□□□□□ -1.14
CDH13-211ENST00000568770 UPP2O95045 317 aa7.92□□□□□ -1.14
CDH13-211ENST00000568770 HMGB2P26583 209 aaKnown RBP7.92□□□□□ -1.14
CDH13-211ENST00000568770 NLRP3Q96P20 1036 aa7.92□□□□□ -1.14
CDH13-211ENST00000568770 SIN3AQ96ST3 1273 aa7.92□□□□□ -1.14
CDH13-211ENST00000568770 HINFPQ9BQA5 517 aa7.92□□□□□ -1.14
CDH13-211ENST00000568770 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
CDH13-211ENST00000568770 POLMQ9NP87 494 aaPredicted RBP7.92□□□□□ -1.14
CDH13-211ENST00000568770 CGNL1Q0VF96 1302 aa7.92□□□□□ -1.14
CDH13-211ENST00000568770 A6NJY4 79 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 FIGNL2A6NMB9 653 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 POTECB2RU33 542 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 M0R2N6 131 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 RNF144AP50876 292 aaPredicted RBP7.91□□□□□ -1.14
CDH13-211ENST00000568770 SCARF1Q14162 830 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 MTFR1Q15390 333 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 TLR1Q15399 786 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 COL13A1Q5TAT6 717 aaPredicted RBP7.91□□□□□ -1.14
CDH13-211ENST00000568770 RAPGEF4Q8WZA2 1011 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 COG3Q96JB2 828 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 PRIMPOLQ96LW4 560 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 GMPR2Q9P2T1 348 aaKnown RBP7.91□□□□□ -1.14
CDH13-211ENST00000568770 IQSEC3Q9UPP2 1182 aaPredicted RBP7.91□□□□□ -1.14
CDH13-211ENST00000568770 PCDH11XQ9BZA7 1347 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 PCDH11YQ9BZA8 1340 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 NSD3Q9BZ95 1437 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 CCDC88AQ3V6T2 1871 aa7.91□□□□□ -1.14
CDH13-211ENST00000568770 PXDNLA1KZ92 1463 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 RTL1A6NKG5 1358 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 BACH1O14867 736 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 C21orf2O43822 256 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 TATP17735 454 aaPredicted RBP7.9□□□□□ -1.14
CDH13-211ENST00000568770 HTRA3P83110 453 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 FOXK2Q01167 660 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 NEUROD1Q13562 356 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 RRS1Q15050 365 aaKnown RBP7.9□□□□□ -1.14
CDH13-211ENST00000568770 RNF217Q8TC41 542 aa7.9□□□□□ -1.14
CDH13-211ENST00000568770 TSPAN10Q9H1Z9 355 aaPredicted RBP7.9□□□□□ -1.14
CDH13-211ENST00000568770 NMRK2Q9NPI5 230 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms