RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ANKRD44Q8N8A2 993 aa17.94■□□□□ 0.46
COMMD4-216ENST00000567023 PUS3Q9BZE2 481 aaKnown RBP17.94■□□□□ 0.46
COMMD4-216ENST00000567023 SCAF8Q9UPN6 1271 aaKnown RBP17.94■□□□□ 0.46
COMMD4-216ENST00000567023 MROH5Q6ZUA9 1318 aa17.94■□□□□ 0.46
COMMD4-216ENST00000567023 KIF23Q02241 960 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-216ENST00000567023 APOBEC3FQ8IUX4 373 aaKnown RBP17.93■□□□□ 0.46
COMMD4-216ENST00000567023 REM2Q8IYK8 340 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-216ENST00000567023 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
COMMD4-216ENST00000567023 TSKSQ9UJT2 592 aa17.93■□□□□ 0.46
COMMD4-216ENST00000567023 FAM205AQ6ZU69 1335 aa17.93■□□□□ 0.46
COMMD4-216ENST00000567023 DLGAP5Q15398 846 aa17.92■□□□□ 0.46
COMMD4-216ENST00000567023 PRAMEF18Q5VWM3 479 aa17.92■□□□□ 0.46
COMMD4-216ENST00000567023 FAM84BQ96KN1 310 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-216ENST00000567023 SAGE1Q9NXZ1 904 aa17.92■□□□□ 0.46
COMMD4-216ENST00000567023 HIBADHP31937 336 aaKnown RBP17.91■□□□□ 0.46
COMMD4-216ENST00000567023 RASAL3Q86YV0 1011 aa17.91■□□□□ 0.46
COMMD4-216ENST00000567023 CSRNP1Q96S65 589 aa17.91■□□□□ 0.46
COMMD4-216ENST00000567023 SMC4Q9NTJ3 1288 aa17.91■□□□□ 0.46
COMMD4-216ENST00000567023 NF2P35240 595 aa17.9■□□□□ 0.46
COMMD4-216ENST00000567023 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
COMMD4-216ENST00000567023 COL1A1P02452 1464 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-216ENST00000567023 SPDYE2BA6NHP3 402 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 PDE8BO95263 885 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 SPDYE6P0CI01 402 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 GYG1P46976 350 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 LRRC24Q50LG9 513 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 MOB2Q70IA6 237 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 FBXO33Q7Z6M2 555 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 DEFB129Q9H1M3 183 aa17.89■□□□□ 0.45
COMMD4-216ENST00000567023 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
COMMD4-216ENST00000567023 CFAP100Q494V2 611 aa17.88■□□□□ 0.45
COMMD4-216ENST00000567023 METTL24Q5JXM2 366 aa17.88■□□□□ 0.45
COMMD4-216ENST00000567023 ABHD8Q96I13 439 aa17.88■□□□□ 0.45
COMMD4-216ENST00000567023 PRMT6Q96LA8 375 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-216ENST00000567023 RNF186Q9NXI6 227 aa17.88■□□□□ 0.45
COMMD4-216ENST00000567023 PPP2R3BQ9Y5P8 575 aa17.88■□□□□ 0.45
COMMD4-216ENST00000567023 F8W031 263 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-216ENST00000567023 MYO1BO43795 1136 aa17.87■□□□□ 0.45
COMMD4-216ENST00000567023 MFSD14BQ5SR56 506 aa17.87■□□□□ 0.45
COMMD4-216ENST00000567023 SERPINA10Q9UK55 444 aa17.87■□□□□ 0.45
COMMD4-216ENST00000567023 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
COMMD4-216ENST00000567023 JAG2Q9Y219 1238 aa17.87■□□□□ 0.45
COMMD4-216ENST00000567023 PCDHAC2Q9Y5I4 1007 aa17.87■□□□□ 0.45
COMMD4-216ENST00000567023 RFX5P48382 616 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-216ENST00000567023 CAVIN4Q5BKX8 364 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 LDLRAD1Q5T700 205 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 ARMC9Q7Z3E5 817 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 ECM29Q5VYK3 1845 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 CASP8AP2Q9UKL3 1982 aa17.86■□□□□ 0.45
COMMD4-216ENST00000567023 TRPA1O75762 1119 aa17.85■□□□□ 0.45
COMMD4-216ENST00000567023 FGFR2P21802 821 aa17.85■□□□□ 0.45
COMMD4-216ENST00000567023 PTPN12Q05209 780 aaKnown RBP17.85■□□□□ 0.45
COMMD4-216ENST00000567023 TTLL12Q14166 644 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-216ENST00000567023 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
COMMD4-216ENST00000567023 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
COMMD4-216ENST00000567023 AKAP11Q9UKA4 1901 aa17.85■□□□□ 0.45
COMMD4-216ENST00000567023 UNCXA6NJT0 531 aa17.84■□□□□ 0.45
COMMD4-216ENST00000567023 EYA2O00167 538 aa17.84■□□□□ 0.45
COMMD4-216ENST00000567023 TM4SF4P48230 202 aa17.84■□□□□ 0.45
COMMD4-216ENST00000567023 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
COMMD4-216ENST00000567023 VPS37DQ86XT2 251 aa17.84■□□□□ 0.45
COMMD4-216ENST00000567023 ARHGAP45Q92619 1136 aa17.84■□□□□ 0.45
COMMD4-216ENST00000567023 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
COMMD4-216ENST00000567023 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
COMMD4-216ENST00000567023 CLRN2A0PK11 232 aa17.83■□□□□ 0.44
COMMD4-216ENST00000567023 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-216ENST00000567023 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
COMMD4-216ENST00000567023 TBC1D22AQ8WUA7 517 aa17.83■□□□□ 0.44
COMMD4-216ENST00000567023 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.44
COMMD4-216ENST00000567023 AOX1Q06278 1338 aa17.82■□□□□ 0.44
COMMD4-216ENST00000567023 PPP1R12BO60237 982 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-216ENST00000567023 IFIT1P09914 478 aaKnown RBP17.82■□□□□ 0.44
COMMD4-216ENST00000567023 BCAMP50895 628 aa17.82■□□□□ 0.44
COMMD4-216ENST00000567023 RBM5P52756 815 aaKnown RBP eCLIP17.82■□□□□ 0.44
COMMD4-216ENST00000567023 HDLBPQ00341 1268 aaKnown RBP17.82■□□□□ 0.44
COMMD4-216ENST00000567023 SUPT20HL1Q3ZLR7 823 aa17.82■□□□□ 0.44
COMMD4-216ENST00000567023 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
COMMD4-216ENST00000567023 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
COMMD4-216ENST00000567023 MRIQ9BWK5 157 aa17.82■□□□□ 0.44
COMMD4-216ENST00000567023 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
COMMD4-216ENST00000567023 RASA3Q14644 834 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 SPDYE2Q495Y8 402 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 DZIP1LQ8IYY4 767 aaKnown RBP17.81■□□□□ 0.44
COMMD4-216ENST00000567023 LPIN2Q92539 896 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 MCOLN1Q9GZU1 580 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 SUGT1Q9Y2Z0 365 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 ARAP2Q8WZ64 1704 aa17.81■□□□□ 0.44
COMMD4-216ENST00000567023 SSC5DA1L4H1 1573 aa17.8■□□□□ 0.44
COMMD4-216ENST00000567023 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-216ENST00000567023 CIAO1O76071 339 aa17.8■□□□□ 0.44
COMMD4-216ENST00000567023 CRKP46108 304 aa17.8■□□□□ 0.44
COMMD4-216ENST00000567023 TNFAIP1Q13829 316 aa17.8■□□□□ 0.44
COMMD4-216ENST00000567023 PRKG1Q13976 671 aa17.8■□□□□ 0.44
COMMD4-216ENST00000567023 GRIK5Q16478 980 aa17.8■□□□□ 0.44
COMMD4-216ENST00000567023 INTS3Q68E01 1043 aaKnown RBP17.8■□□□□ 0.44
COMMD4-216ENST00000567023 ZNF70Q9UC06 446 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-216ENST00000567023 IQSEC3Q9UPP2 1182 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms