RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 NF2P35240 595 aa12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 VPS37DQ86XT2 251 aa12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 ANKRD44Q8N8A2 993 aa12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
HMGN2P40-201ENST00000566875 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 MYO1BO43795 1136 aa12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 PDE8BO95263 885 aa12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 APOBEC3FQ8IUX4 373 aaKnown RBP12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 MYH3P11055 1940 aa12.7□□□□□ -0.38
HMGN2P40-201ENST00000566875 FAM205AQ6ZU69 1335 aa12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 UBTFL1P0CB47 393 aaPredicted RBP12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 GYG1P46976 350 aa12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 RARSP54136 660 aaKnown RBP12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 LRRC24Q50LG9 513 aa12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 PRAMEF18Q5VWM3 479 aa12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 ZBED3Q96IU2 234 aaPredicted RBP12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 TRPM7Q96QT4 1865 aa12.69□□□□□ -0.38
HMGN2P40-201ENST00000566875 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 F8W031 263 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 UBE2Q2LH0YL09 131 aa12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 RBM5P52756 815 aaKnown RBP eCLIP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 PRMT6Q96LA8 375 aaPredicted RBP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 SCAF8Q9UPN6 1271 aaKnown RBP12.68□□□□□ -0.38
HMGN2P40-201ENST00000566875 EYA2O00167 538 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 MIER1Q8N108 512 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 TBC1D22AQ8WUA7 517 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 ZIC5Q96T25 663 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
HMGN2P40-201ENST00000566875 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 CAPN15O75808 1086 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 SLC10A3P09131 477 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 SERPINA10Q9UK55 444 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 TTF2Q9UNY4 1162 aaKnown RBP12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
HMGN2P40-201ENST00000566875 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 GNAI3P08754 354 aa12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 BCAMP50895 628 aa12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 PUM3Q15397 648 aaKnown RBP12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 MOB2Q70IA6 237 aa12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 VGLL2Q8N8G2 317 aa12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 LPIN2Q92539 896 aa12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 SAGE1Q9NXZ1 904 aa12.65□□□□□ -0.38
HMGN2P40-201ENST00000566875 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 UNCXA6NJT0 531 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 TRPA1O75762 1119 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 CIAO1O76071 339 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 FGFR2P21802 821 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 LDLRAD1Q5T700 205 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 RNF186Q9NXI6 227 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 SUGT1Q9Y2Z0 365 aa12.64□□□□□ -0.39
HMGN2P40-201ENST00000566875 SLC5A1P13866 664 aa12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 IL15P40933 162 aaPredicted RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 PRKG1Q13976 671 aa12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 DZIP1LQ8IYY4 767 aaKnown RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 ANGEL1Q9UNK9 670 aaKnown RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 IQSEC3Q9UPP2 1182 aaPredicted RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
HMGN2P40-201ENST00000566875 CLRN2A0PK11 232 aa12.62□□□□□ -0.39
HMGN2P40-201ENST00000566875 TM4SF4P48230 202 aa12.62□□□□□ -0.39
HMGN2P40-201ENST00000566875 INHBEP58166 350 aa12.62□□□□□ -0.39
HMGN2P40-201ENST00000566875 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMGN2P40-201ENST00000566875 RASA3Q14644 834 aa12.62□□□□□ -0.39
HMGN2P40-201ENST00000566875 ATF7IPQ6VMQ6 1270 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms