RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ANKRD44Q8N8A2 993 aa25.36■■□□□ 1.65
CLN6-207ENST00000566347 ZIC5Q96T25 663 aa25.36■■□□□ 1.65
CLN6-207ENST00000566347 PUS3Q9BZE2 481 aaKnown RBP25.36■■□□□ 1.65
CLN6-207ENST00000566347 SCAF8Q9UPN6 1271 aaKnown RBP25.36■■□□□ 1.65
CLN6-207ENST00000566347 RIPOR2Q9Y4F9 1068 aa25.36■■□□□ 1.65
CLN6-207ENST00000566347 DLGAP5Q15398 846 aa25.35■■□□□ 1.65
CLN6-207ENST00000566347 MTMR14Q8NCE2 650 aa25.35■■□□□ 1.65
CLN6-207ENST00000566347 USP44Q9H0E7 712 aa25.35■■□□□ 1.65
CLN6-207ENST00000566347 TSKSQ9UJT2 592 aa25.35■■□□□ 1.65
CLN6-207ENST00000566347 HIBADHP31937 336 aaKnown RBP25.33■■□□□ 1.65
CLN6-207ENST00000566347 KIF23Q02241 960 aaPredicted RBP25.33■■□□□ 1.65
CLN6-207ENST00000566347 FAM205AQ6ZU69 1335 aa25.33■■□□□ 1.64
CLN6-207ENST00000566347 PRAMEF18Q5VWM3 479 aa25.32■■□□□ 1.64
CLN6-207ENST00000566347 REM2Q8IYK8 340 aaPredicted RBP25.32■■□□□ 1.64
CLN6-207ENST00000566347 TDRD7Q8NHU6 1098 aaKnown RBP25.32■■□□□ 1.64
CLN6-207ENST00000566347 SAGE1Q9NXZ1 904 aa25.32■■□□□ 1.64
CLN6-207ENST00000566347 COL1A1P02452 1464 aaPredicted RBP25.32■■□□□ 1.64
CLN6-207ENST00000566347 F8W031 263 aaPredicted RBP25.31■■□□□ 1.64
CLN6-207ENST00000566347 GYG1P46976 350 aa25.31■■□□□ 1.64
CLN6-207ENST00000566347 TTLL12Q14166 644 aaPredicted RBP25.31■■□□□ 1.64
CLN6-207ENST00000566347 METTL24Q5JXM2 366 aa25.31■■□□□ 1.64
CLN6-207ENST00000566347 RASAL3Q86YV0 1011 aa25.31■■□□□ 1.64
CLN6-207ENST00000566347 FAM84BQ96KN1 310 aaPredicted RBP25.31■■□□□ 1.64
CLN6-207ENST00000566347 ECM29Q5VYK3 1845 aa25.3■■□□□ 1.64
CLN6-207ENST00000566347 MYO1BO43795 1136 aa25.3■■□□□ 1.64
CLN6-207ENST00000566347 CFAP100Q494V2 611 aa25.3■■□□□ 1.64
CLN6-207ENST00000566347 LRRC24Q50LG9 513 aa25.3■■□□□ 1.64
CLN6-207ENST00000566347 JAG2Q9Y219 1238 aa25.3■■□□□ 1.64
CLN6-207ENST00000566347 MOB2Q70IA6 237 aa25.29■■□□□ 1.64
CLN6-207ENST00000566347 VPS37DQ86XT2 251 aa25.29■■□□□ 1.64
CLN6-207ENST00000566347 AKAP11Q9UKA4 1901 aa25.29■■□□□ 1.64
CLN6-207ENST00000566347 SPDYE2BA6NHP3 402 aa25.28■■□□□ 1.64
CLN6-207ENST00000566347 UBE2Q2LH0YL09 131 aa25.28■■□□□ 1.64
CLN6-207ENST00000566347 PDE8BO95263 885 aa25.28■■□□□ 1.64
CLN6-207ENST00000566347 SPDYE6P0CI01 402 aa25.28■■□□□ 1.64
CLN6-207ENST00000566347 MFSD14BQ5SR56 506 aa25.28■■□□□ 1.64
CLN6-207ENST00000566347 API5Q9BZZ5 524 aaKnown RBP25.28■■□□□ 1.64
CLN6-207ENST00000566347 NOB1Q9ULX3 412 aaKnown RBP25.28■■□□□ 1.64
CLN6-207ENST00000566347 PPP2R3BQ9Y5P8 575 aa25.28■■□□□ 1.64
CLN6-207ENST00000566347 CAVIN4Q5BKX8 364 aa25.27■■□□□ 1.64
CLN6-207ENST00000566347 ARMC9Q7Z3E5 817 aa25.27■■□□□ 1.64
CLN6-207ENST00000566347 VGLL2Q8N8G2 317 aa25.27■■□□□ 1.64
CLN6-207ENST00000566347 CSRNP1Q96S65 589 aa25.27■■□□□ 1.64
CLN6-207ENST00000566347 DEFB129Q9H1M3 183 aa25.27■■□□□ 1.64
CLN6-207ENST00000566347 CASP8AP2Q9UKL3 1982 aa25.26■■□□□ 1.63
CLN6-207ENST00000566347 FBXO33Q7Z6M2 555 aa25.26■■□□□ 1.63
CLN6-207ENST00000566347 ABHD8Q96I13 439 aa25.26■■□□□ 1.63
CLN6-207ENST00000566347 HDAC5Q9UQL6 1122 aa25.26■■□□□ 1.63
CLN6-207ENST00000566347 ARAP2Q8WZ64 1704 aa25.26■■□□□ 1.63
CLN6-207ENST00000566347 UBTFL1P0CB47 393 aaPredicted RBP25.25■■□□□ 1.63
CLN6-207ENST00000566347 RBM5P52756 815 aaKnown RBP eCLIP25.25■■□□□ 1.63
CLN6-207ENST00000566347 KLHDC4Q8TBB5 520 aa25.25■■□□□ 1.63
CLN6-207ENST00000566347 PRMT6Q96LA8 375 aaPredicted RBP25.25■■□□□ 1.63
CLN6-207ENST00000566347 RNF186Q9NXI6 227 aa25.25■■□□□ 1.63
CLN6-207ENST00000566347 SERPINA10Q9UK55 444 aa25.25■■□□□ 1.63
CLN6-207ENST00000566347 PCDHAC2Q9Y5I4 1007 aa25.25■■□□□ 1.63
CLN6-207ENST00000566347 TTF2Q9UNY4 1162 aaKnown RBP25.24■■□□□ 1.63
CLN6-207ENST00000566347 KIF16BQ96L93 1317 aa25.23■■□□□ 1.63
CLN6-207ENST00000566347 TRPA1O75762 1119 aa25.23■■□□□ 1.63
CLN6-207ENST00000566347 RARSP54136 660 aaKnown RBP25.23■■□□□ 1.63
CLN6-207ENST00000566347 PUM3Q15397 648 aaKnown RBP25.23■■□□□ 1.63
CLN6-207ENST00000566347 TBC1D22AQ8WUA7 517 aa25.23■■□□□ 1.63
CLN6-207ENST00000566347 CLRN2A0PK11 232 aa25.22■■□□□ 1.63
CLN6-207ENST00000566347 EYA2O00167 538 aa25.22■■□□□ 1.63
CLN6-207ENST00000566347 FRAT2O75474 233 aaPredicted RBP25.22■■□□□ 1.63
CLN6-207ENST00000566347 IFIT1P09914 478 aaKnown RBP25.22■■□□□ 1.63
CLN6-207ENST00000566347 RFX5P48382 616 aaPredicted RBP25.22■■□□□ 1.63
CLN6-207ENST00000566347 VEZTQ9HBM0 779 aa25.22■■□□□ 1.63
CLN6-207ENST00000566347 PTPN12Q05209 780 aaKnown RBP25.21■■□□□ 1.63
CLN6-207ENST00000566347 PRKG1Q13976 671 aa25.21■■□□□ 1.63
CLN6-207ENST00000566347 SUPT20HL1Q3ZLR7 823 aa25.21■■□□□ 1.63
CLN6-207ENST00000566347 ARHGAP45Q92619 1136 aa25.21■■□□□ 1.63
CLN6-207ENST00000566347 FBXO3Q9UK99 471 aa25.21■■□□□ 1.63
CLN6-207ENST00000566347 ANGEL1Q9UNK9 670 aaKnown RBP25.21■■□□□ 1.63
CLN6-207ENST00000566347 PPP1R12BO60237 982 aaPredicted RBP25.2■■□□□ 1.62
CLN6-207ENST00000566347 FGFR2P21802 821 aa25.2■■□□□ 1.62
CLN6-207ENST00000566347 TNFAIP1Q13829 316 aa25.2■■□□□ 1.62
CLN6-207ENST00000566347 LDLRAD1Q5T700 205 aa25.2■■□□□ 1.62
CLN6-207ENST00000566347 IQSEC3Q9UPP2 1182 aaPredicted RBP25.2■■□□□ 1.62
CLN6-207ENST00000566347 CHAF1AQ13111 956 aaPredicted RBP25.19■■□□□ 1.62
CLN6-207ENST00000566347 MAP3K11Q16584 847 aa25.19■■□□□ 1.62
CLN6-207ENST00000566347 AOX1Q06278 1338 aa25.18■■□□□ 1.62
CLN6-207ENST00000566347 SLC5A1P13866 664 aa25.18■■□□□ 1.62
CLN6-207ENST00000566347 BCAMP50895 628 aa25.18■■□□□ 1.62
CLN6-207ENST00000566347 SPDYE2Q495Y8 402 aa25.18■■□□□ 1.62
CLN6-207ENST00000566347 DZIP1LQ8IYY4 767 aaKnown RBP25.18■■□□□ 1.62
CLN6-207ENST00000566347 LPIN2Q92539 896 aa25.18■■□□□ 1.62
CLN6-207ENST00000566347 UNCXA6NJT0 531 aa25.17■■□□□ 1.62
CLN6-207ENST00000566347 CIAO1O76071 339 aa25.17■■□□□ 1.62
CLN6-207ENST00000566347 CRKP46108 304 aa25.17■■□□□ 1.62
CLN6-207ENST00000566347 HDLBPQ00341 1268 aaKnown RBP25.17■■□□□ 1.62
CLN6-207ENST00000566347 RASA3Q14644 834 aa25.17■■□□□ 1.62
CLN6-207ENST00000566347 MCOLN1Q9GZU1 580 aa25.17■■□□□ 1.62
CLN6-207ENST00000566347 ZNF70Q9UC06 446 aaPredicted RBP25.17■■□□□ 1.62
CLN6-207ENST00000566347 SSC5DA1L4H1 1573 aa25.17■■□□□ 1.62
CLN6-207ENST00000566347 TM4SF4P48230 202 aa25.16■■□□□ 1.62
CLN6-207ENST00000566347 SREBF2Q12772 1141 aa25.16■■□□□ 1.62
CLN6-207ENST00000566347 DGKZQ13574 1117 aa25.16■■□□□ 1.62
CLN6-207ENST00000566347 ATG9AQ7Z3C6 839 aa25.16■■□□□ 1.62
CLN6-207ENST00000566347 SUGT1Q9Y2Z0 365 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms