RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 KLRK1P26718 216 aa20.89■□□□□ 0.93
USB1-211ENST00000565662 HUNKP57058 714 aa20.89■□□□□ 0.93
USB1-211ENST00000565662 PUM3Q15397 648 aaKnown RBP20.89■□□□□ 0.93
USB1-211ENST00000565662 INTS3Q68E01 1043 aaKnown RBP20.89■□□□□ 0.93
USB1-211ENST00000565662 REM2Q8IYK8 340 aaPredicted RBP20.89■□□□□ 0.93
USB1-211ENST00000565662 MIER1Q8N108 512 aa20.89■□□□□ 0.93
USB1-211ENST00000565662 WNT10BO00744 389 aa20.88■□□□□ 0.93
USB1-211ENST00000565662 CIAO1O76071 339 aa20.88■□□□□ 0.93
USB1-211ENST00000565662 DLGAP5Q15398 846 aa20.88■□□□□ 0.93
USB1-211ENST00000565662 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
USB1-211ENST00000565662 KIAA0825Q8IV33 1275 aa20.88■□□□□ 0.93
USB1-211ENST00000565662 PCNTO95613 3336 aa20.87■□□□□ 0.93
USB1-211ENST00000565662 MAST3O60307 1309 aa20.87■□□□□ 0.93
USB1-211ENST00000565662 WTIPA6NIX2 430 aaPredicted RBP20.87■□□□□ 0.93
USB1-211ENST00000565662 ADM5C9JUS6 153 aa20.87■□□□□ 0.93
USB1-211ENST00000565662 EYA2O00167 538 aa20.87■□□□□ 0.93
USB1-211ENST00000565662 ATF7IPQ6VMQ6 1270 aa20.87■□□□□ 0.93
USB1-211ENST00000565662 TDRD7Q8NHU6 1098 aaKnown RBP20.87■□□□□ 0.93
USB1-211ENST00000565662 CDCA5Q96FF9 252 aa20.87■□□□□ 0.93
USB1-211ENST00000565662 FRAT2O75474 233 aaPredicted RBP20.86■□□□□ 0.93
USB1-211ENST00000565662 SLC5A1P13866 664 aa20.86■□□□□ 0.93
USB1-211ENST00000565662 CYP4F22Q6NT55 531 aa20.86■□□□□ 0.93
USB1-211ENST00000565662 RGMBQ6NW40 437 aa20.86■□□□□ 0.93
USB1-211ENST00000565662 SUGT1Q9Y2Z0 365 aa20.86■□□□□ 0.93
USB1-211ENST00000565662 MYH13Q9UKX3 1938 aa20.85■□□□□ 0.93
USB1-211ENST00000565662 FMR1Q06787 632 aaKnown RBP eCLIP20.85■□□□□ 0.93
USB1-211ENST00000565662 TNFAIP1Q13829 316 aa20.85■□□□□ 0.93
USB1-211ENST00000565662 VGLL2Q8N8G2 317 aa20.85■□□□□ 0.93
USB1-211ENST00000565662 LPIN2Q92539 896 aa20.85■□□□□ 0.93
USB1-211ENST00000565662 PUS3Q9BZE2 481 aaKnown RBP20.85■□□□□ 0.93
USB1-211ENST00000565662 SERPINA10Q9UK55 444 aa20.85■□□□□ 0.93
USB1-211ENST00000565662 IL15P40933 162 aaPredicted RBP20.84■□□□□ 0.93
USB1-211ENST00000565662 MFSD14BQ5SR56 506 aa20.84■□□□□ 0.93
USB1-211ENST00000565662 ZBED3Q96IU2 234 aaPredicted RBP20.84■□□□□ 0.93
USB1-211ENST00000565662 FAM84BQ96KN1 310 aaPredicted RBP20.84■□□□□ 0.93
USB1-211ENST00000565662 UNCXA6NJT0 531 aa20.83■□□□□ 0.93
USB1-211ENST00000565662 ZBTB22O15209 634 aa20.83■□□□□ 0.93
USB1-211ENST00000565662 HDLBPQ00341 1268 aaKnown RBP20.83■□□□□ 0.93
USB1-211ENST00000565662 PTPN12Q05209 780 aaKnown RBP20.83■□□□□ 0.93
USB1-211ENST00000565662 NBPF9Q3BBW0 867 aa20.83■□□□□ 0.93
USB1-211ENST00000565662 LRRC24Q50LG9 513 aa20.83■□□□□ 0.93
USB1-211ENST00000565662 ZKSCAN2Q63HK3 967 aa20.83■□□□□ 0.93
USB1-211ENST00000565662 FBXO33Q7Z6M2 555 aa20.83■□□□□ 0.93
USB1-211ENST00000565662 GNL3LQ9NVN8 582 aaKnown RBP20.83■□□□□ 0.93
USB1-211ENST00000565662 SNAP23O00161 211 aa20.82■□□□□ 0.92
USB1-211ENST00000565662 TRIM27P14373 513 aa20.82■□□□□ 0.92
USB1-211ENST00000565662 RFX5P48382 616 aaPredicted RBP20.82■□□□□ 0.92
USB1-211ENST00000565662 MTX1Q13505 466 aa20.82■□□□□ 0.92
USB1-211ENST00000565662 CEP126Q9P2H0 1117 aa20.82■□□□□ 0.92
USB1-211ENST00000565662 SPDYE2BA6NHP3 402 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 FOXN1O15353 648 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 SPDYE6P0CI01 402 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 GYG1P46976 350 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 GRM1Q13255 1194 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 ARMC9Q7Z3E5 817 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 COPRSQ9NQ92 184 aa20.81■□□□□ 0.92
USB1-211ENST00000565662 LRRFIP2Q9Y608 721 aaKnown RBP20.81■□□□□ 0.92
USB1-211ENST00000565662 SEMA3EO15041 775 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 GNAI2P04899 355 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 MS4A1P11836 297 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 FGFR2P21802 821 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 ZNF157P51786 506 aaPredicted RBP20.8■□□□□ 0.92
USB1-211ENST00000565662 CFAP100Q494V2 611 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
USB1-211ENST00000565662 TNS4Q8IZW8 715 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 CERS5Q8N5B7 392 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
USB1-211ENST00000565662 MRIQ9BWK5 157 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 SAGE1Q9NXZ1 904 aa20.8■□□□□ 0.92
USB1-211ENST00000565662 SLC10A3P09131 477 aa20.79■□□□□ 0.92
USB1-211ENST00000565662 SUPT20HL1Q3ZLR7 823 aa20.79■□□□□ 0.92
USB1-211ENST00000565662 WDR66Q8TBY9 1149 aa20.79■□□□□ 0.92
USB1-211ENST00000565662 MEIS3Q99687 375 aa20.79■□□□□ 0.92
USB1-211ENST00000565662 TTF2Q9UNY4 1162 aaKnown RBP20.79■□□□□ 0.92
USB1-211ENST00000565662 AKAP2Q9Y2D5 859 aa20.79■□□□□ 0.92
USB1-211ENST00000565662 ASTN2O75129 1339 aaPredicted RBP20.78■□□□□ 0.92
USB1-211ENST00000565662 TNNI2P48788 182 aa20.78■□□□□ 0.92
USB1-211ENST00000565662 RBM5P52756 815 aaKnown RBP eCLIP20.78■□□□□ 0.92
USB1-211ENST00000565662 ZGPATQ8N5A5 531 aaKnown RBP20.78■□□□□ 0.92
USB1-211ENST00000565662 PPP1R12BO60237 982 aaPredicted RBP20.77■□□□□ 0.92
USB1-211ENST00000565662 TTLL12Q14166 644 aaPredicted RBP20.77■□□□□ 0.92
USB1-211ENST00000565662 ATP2B3Q16720 1220 aa20.77■□□□□ 0.92
USB1-211ENST00000565662 COL13A1Q5TAT6 717 aaPredicted RBP20.77■□□□□ 0.92
USB1-211ENST00000565662 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.92
USB1-211ENST00000565662 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 F8W031 263 aaPredicted RBP20.76■□□□□ 0.91
USB1-211ENST00000565662 SRGAP3O43295 1099 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 ATG9AQ7Z3C6 839 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 TEKT1Q969V4 418 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 HOOK2Q96ED9 719 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 DEFB129Q9H1M3 183 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 TMOD2Q9NZR1 351 aa20.76■□□□□ 0.91
USB1-211ENST00000565662 HSPA8P11142 646 aaKnown RBP20.75■□□□□ 0.91
USB1-211ENST00000565662 PDS5AQ29RF7 1337 aaKnown RBP20.75■□□□□ 0.91
USB1-211ENST00000565662 AOC2O75106 756 aa20.74■□□□□ 0.91
USB1-211ENST00000565662 BCAR3O75815 825 aa20.74■□□□□ 0.91
USB1-211ENST00000565662 SPDYE2Q495Y8 402 aa20.74■□□□□ 0.91
USB1-211ENST00000565662 SIL1Q9H173 461 aa20.74■□□□□ 0.91
USB1-211ENST00000565662 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms