RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 CCDC102AQ96A19 550 aa19.71■□□□□ 0.75
CDH3-204ENST00000565453 FAM205AQ6ZU69 1335 aa19.71■□□□□ 0.75
CDH3-204ENST00000565453 MROH5Q6ZUA9 1318 aa19.71■□□□□ 0.75
CDH3-204ENST00000565453 CA12O43570 354 aa19.7■□□□□ 0.74
CDH3-204ENST00000565453 SLC10A3P09131 477 aa19.7■□□□□ 0.74
CDH3-204ENST00000565453 ZNF157P51786 506 aaPredicted RBP19.7■□□□□ 0.74
CDH3-204ENST00000565453 PRAMEF18Q5VWM3 479 aa19.7■□□□□ 0.74
CDH3-204ENST00000565453 VGLL2Q8N8G2 317 aa19.7■□□□□ 0.74
CDH3-204ENST00000565453 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
CDH3-204ENST00000565453 FAM84BQ96KN1 310 aaPredicted RBP19.7■□□□□ 0.74
CDH3-204ENST00000565453 TSKSQ9UJT2 592 aa19.7■□□□□ 0.74
CDH3-204ENST00000565453 CAPN15O75808 1086 aa19.69■□□□□ 0.74
CDH3-204ENST00000565453 GYG1P46976 350 aa19.69■□□□□ 0.74
CDH3-204ENST00000565453 KLHDC4Q8TBB5 520 aa19.69■□□□□ 0.74
CDH3-204ENST00000565453 NOB1Q9ULX3 412 aaKnown RBP19.69■□□□□ 0.74
CDH3-204ENST00000565453 JAG2Q9Y219 1238 aa19.69■□□□□ 0.74
CDH3-204ENST00000565453 HIBADHP31937 336 aaKnown RBP19.68■□□□□ 0.74
CDH3-204ENST00000565453 RFX5P48382 616 aaPredicted RBP19.68■□□□□ 0.74
CDH3-204ENST00000565453 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
CDH3-204ENST00000565453 MOB2Q70IA6 237 aa19.68■□□□□ 0.74
CDH3-204ENST00000565453 RASAL3Q86YV0 1011 aa19.68■□□□□ 0.74
CDH3-204ENST00000565453 APOBEC3FQ8IUX4 373 aaKnown RBP19.68■□□□□ 0.74
CDH3-204ENST00000565453 PCDHAC2Q9Y5I4 1007 aa19.68■□□□□ 0.74
CDH3-204ENST00000565453 DLGAP5Q15398 846 aa19.67■□□□□ 0.74
CDH3-204ENST00000565453 FBXO33Q7Z6M2 555 aa19.67■□□□□ 0.74
CDH3-204ENST00000565453 ARAP2Q8WZ64 1704 aa19.66■□□□□ 0.74
CDH3-204ENST00000565453 F8W031 263 aaPredicted RBP19.66■□□□□ 0.74
CDH3-204ENST00000565453 RARSP54136 660 aaKnown RBP19.66■□□□□ 0.74
CDH3-204ENST00000565453 CFAP100Q494V2 611 aa19.66■□□□□ 0.74
CDH3-204ENST00000565453 METTL24Q5JXM2 366 aa19.66■□□□□ 0.74
CDH3-204ENST00000565453 ECM29Q5VYK3 1845 aa19.66■□□□□ 0.74
CDH3-204ENST00000565453 COL1A1P02452 1464 aaPredicted RBP19.66■□□□□ 0.74
CDH3-204ENST00000565453 SPDYE2BA6NHP3 402 aa19.65■□□□□ 0.74
CDH3-204ENST00000565453 UBE2Q2LH0YL09 131 aa19.65■□□□□ 0.74
CDH3-204ENST00000565453 PDE8BO95263 885 aa19.65■□□□□ 0.74
CDH3-204ENST00000565453 SPDYE6P0CI01 402 aa19.65■□□□□ 0.74
CDH3-204ENST00000565453 PRMT6Q96LA8 375 aaPredicted RBP19.65■□□□□ 0.74
CDH3-204ENST00000565453 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
CDH3-204ENST00000565453 AOX1Q06278 1338 aa19.65■□□□□ 0.74
CDH3-204ENST00000565453 PTPN12Q05209 780 aaKnown RBP19.64■□□□□ 0.73
CDH3-204ENST00000565453 MFSD14BQ5SR56 506 aa19.64■□□□□ 0.73
CDH3-204ENST00000565453 CSRNP1Q96S65 589 aa19.64■□□□□ 0.73
CDH3-204ENST00000565453 EYA2O00167 538 aa19.63■□□□□ 0.73
CDH3-204ENST00000565453 FGFR2P21802 821 aa19.63■□□□□ 0.73
CDH3-204ENST00000565453 NF2P35240 595 aa19.63■□□□□ 0.73
CDH3-204ENST00000565453 DEFB129Q9H1M3 183 aa19.63■□□□□ 0.73
CDH3-204ENST00000565453 SAGE1Q9NXZ1 904 aa19.63■□□□□ 0.73
CDH3-204ENST00000565453 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
CDH3-204ENST00000565453 UBTFL1P0CB47 393 aaPredicted RBP19.62■□□□□ 0.73
CDH3-204ENST00000565453 ARHGAP45Q92619 1136 aa19.62■□□□□ 0.73
CDH3-204ENST00000565453 SSC5DA1L4H1 1573 aa19.61■□□□□ 0.73
CDH3-204ENST00000565453 CLRN2A0PK11 232 aa19.61■□□□□ 0.73
CDH3-204ENST00000565453 TTLL12Q14166 644 aaPredicted RBP19.61■□□□□ 0.73
CDH3-204ENST00000565453 GRIK5Q16478 980 aa19.61■□□□□ 0.73
CDH3-204ENST00000565453 ATG9AQ7Z3C6 839 aa19.61■□□□□ 0.73
CDH3-204ENST00000565453 RNF186Q9NXI6 227 aa19.61■□□□□ 0.73
CDH3-204ENST00000565453 TTF2Q9UNY4 1162 aaKnown RBP19.61■□□□□ 0.73
CDH3-204ENST00000565453 IQSEC3Q9UPP2 1182 aaPredicted RBP19.61■□□□□ 0.73
CDH3-204ENST00000565453 PPP2R3BQ9Y5P8 575 aa19.61■□□□□ 0.73
CDH3-204ENST00000565453 BCAMP50895 628 aa19.6■□□□□ 0.73
CDH3-204ENST00000565453 PUM3Q15397 648 aaKnown RBP19.6■□□□□ 0.73
CDH3-204ENST00000565453 CAVIN4Q5BKX8 364 aa19.6■□□□□ 0.73
CDH3-204ENST00000565453 LDLRAD1Q5T700 205 aa19.6■□□□□ 0.73
CDH3-204ENST00000565453 REM2Q8IYK8 340 aaPredicted RBP19.6■□□□□ 0.73
CDH3-204ENST00000565453 SERPINA10Q9UK55 444 aa19.6■□□□□ 0.73
CDH3-204ENST00000565453 MYO1BO43795 1136 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 PRKG1Q13976 671 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
CDH3-204ENST00000565453 ARMC9Q7Z3E5 817 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 VPS37DQ86XT2 251 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 MIER1Q8N108 512 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 ABHD8Q96I13 439 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 MEIS3Q99687 375 aa19.59■□□□□ 0.73
CDH3-204ENST00000565453 LRRFIP2Q9Y608 721 aaKnown RBP19.59■□□□□ 0.73
CDH3-204ENST00000565453 CASP8AP2Q9UKL3 1982 aa19.58■□□□□ 0.73
CDH3-204ENST00000565453 TRPA1O75762 1119 aa19.58■□□□□ 0.72
CDH3-204ENST00000565453 IFIT1P09914 478 aaKnown RBP19.58■□□□□ 0.72
CDH3-204ENST00000565453 RBM5P52756 815 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDH3-204ENST00000565453 CHAF1AQ13111 956 aaPredicted RBP19.58■□□□□ 0.72
CDH3-204ENST00000565453 MAP3K11Q16584 847 aa19.58■□□□□ 0.72
CDH3-204ENST00000565453 SPDYE2Q495Y8 402 aa19.58■□□□□ 0.72
CDH3-204ENST00000565453 VEZTQ9HBM0 779 aa19.58■□□□□ 0.72
CDH3-204ENST00000565453 FBXO3Q9UK99 471 aa19.58■□□□□ 0.72
CDH3-204ENST00000565453 FZD1Q9UP38 647 aa19.58■□□□□ 0.72
CDH3-204ENST00000565453 AKAP11Q9UKA4 1901 aa19.57■□□□□ 0.72
CDH3-204ENST00000565453 CIAO1O76071 339 aa19.57■□□□□ 0.72
CDH3-204ENST00000565453 CRKP46108 304 aa19.57■□□□□ 0.72
CDH3-204ENST00000565453 TBC1D22AQ8WUA7 517 aa19.57■□□□□ 0.72
CDH3-204ENST00000565453 LPIN2Q92539 896 aa19.57■□□□□ 0.72
CDH3-204ENST00000565453 ZNF70Q9UC06 446 aaPredicted RBP19.57■□□□□ 0.72
CDH3-204ENST00000565453 ANGEL1Q9UNK9 670 aaKnown RBP19.57■□□□□ 0.72
CDH3-204ENST00000565453 HDLBPQ00341 1268 aaKnown RBP19.56■□□□□ 0.72
CDH3-204ENST00000565453 RASA3Q14644 834 aa19.56■□□□□ 0.72
CDH3-204ENST00000565453 NBPF12Q5TAG4 269 aaPredicted RBP19.56■□□□□ 0.72
CDH3-204ENST00000565453 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
CDH3-204ENST00000565453 TDRD3Q9H7E2 651 aaKnown RBP19.56■□□□□ 0.72
CDH3-204ENST00000565453 HDAC5Q9UQL6 1122 aa19.56■□□□□ 0.72
CDH3-204ENST00000565453 BCAR3O75815 825 aa19.55■□□□□ 0.72
CDH3-204ENST00000565453 SLC5A1P13866 664 aa19.55■□□□□ 0.72
CDH3-204ENST00000565453 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms