RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 PRAMEF18Q5VWM3 479 aa11.57□□□□□ -0.56
PTPN9-203ENST00000563835 GBA2Q9HCG7 927 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-203ENST00000563835 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-203ENST00000563835 PITPNM2Q9BZ72 1349 aa11.57□□□□□ -0.56
PTPN9-203ENST00000563835 OTOFQ9HC10 1997 aa11.56□□□□□ -0.56
PTPN9-203ENST00000563835 ECE1P42892 770 aa11.56□□□□□ -0.56
PTPN9-203ENST00000563835 PTPN12Q05209 780 aaKnown RBP11.56□□□□□ -0.56
PTPN9-203ENST00000563835 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
PTPN9-203ENST00000563835 FRAT1Q92837 279 aaPredicted RBP11.56□□□□□ -0.56
PTPN9-203ENST00000563835 ZBED3Q96IU2 234 aaPredicted RBP11.56□□□□□ -0.56
PTPN9-203ENST00000563835 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
PTPN9-203ENST00000563835 ZIC5Q96T25 663 aa11.56□□□□□ -0.56
PTPN9-203ENST00000563835 SIL1Q9H173 461 aa11.56□□□□□ -0.56
PTPN9-203ENST00000563835 WBP1LQ9NX94 342 aa11.56□□□□□ -0.56
PTPN9-203ENST00000563835 SSC5DA1L4H1 1573 aa11.55□□□□□ -0.56
PTPN9-203ENST00000563835 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
PTPN9-203ENST00000563835 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
PTPN9-203ENST00000563835 INTS3Q68E01 1043 aaKnown RBP11.55□□□□□ -0.56
PTPN9-203ENST00000563835 MOB2Q70IA6 237 aa11.55□□□□□ -0.56
PTPN9-203ENST00000563835 ATG9AQ7Z3C6 839 aa11.55□□□□□ -0.56
PTPN9-203ENST00000563835 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
PTPN9-203ENST00000563835 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
PTPN9-203ENST00000563835 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
PTPN9-203ENST00000563835 FAM155AB1AL88 458 aaPredicted RBP11.54□□□□□ -0.56
PTPN9-203ENST00000563835 EYA2O00167 538 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 PDE8BO95263 885 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 HSPA8P11142 646 aaKnown RBP11.54□□□□□ -0.56
PTPN9-203ENST00000563835 CHAF1AQ13111 956 aaPredicted RBP11.54□□□□□ -0.56
PTPN9-203ENST00000563835 GRIK5Q16478 980 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 ARHGAP45Q92619 1136 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 AIDAQ96BJ3 306 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 HHIPL1Q96JK4 782 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 FAM205AQ6ZU69 1335 aa11.54□□□□□ -0.56
PTPN9-203ENST00000563835 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 FGFR2P21802 821 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 BCAMP50895 628 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 LBX1P52954 281 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 FKBP1AP62942 108 aaKnown RBP11.53□□□□□ -0.56
PTPN9-203ENST00000563835 PUM3Q15397 648 aaKnown RBP11.53□□□□□ -0.56
PTPN9-203ENST00000563835 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 MFSD14BQ5SR56 506 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 FBXO33Q7Z6M2 555 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 FZD1Q9UP38 647 aa11.53□□□□□ -0.56
PTPN9-203ENST00000563835 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
PTPN9-203ENST00000563835 LAMB1P07942 1786 aa11.52□□□□□ -0.57
PTPN9-203ENST00000563835 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
PTPN9-203ENST00000563835 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
PTPN9-203ENST00000563835 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.57
PTPN9-203ENST00000563835 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.57
PTPN9-203ENST00000563835 DLGAP5Q15398 846 aa11.52□□□□□ -0.57
PTPN9-203ENST00000563835 RGMBQ6NW40 437 aa11.52□□□□□ -0.57
PTPN9-203ENST00000563835 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
PTPN9-203ENST00000563835 SLC10A3P09131 477 aa11.51□□□□□ -0.57
PTPN9-203ENST00000563835 ZNF157P51786 506 aaPredicted RBP11.51□□□□□ -0.57
PTPN9-203ENST00000563835 PRKG1Q13976 671 aa11.51□□□□□ -0.57
PTPN9-203ENST00000563835 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
PTPN9-203ENST00000563835 RASAL3Q86YV0 1011 aa11.51□□□□□ -0.57
PTPN9-203ENST00000563835 APOBEC3FQ8IUX4 373 aaKnown RBP11.51□□□□□ -0.57
PTPN9-203ENST00000563835 TNS4Q8IZW8 715 aa11.51□□□□□ -0.57
PTPN9-203ENST00000563835 MTMR14Q8NCE2 650 aa11.51□□□□□ -0.57
PTPN9-203ENST00000563835 PRMT6Q96LA8 375 aaPredicted RBP11.51□□□□□ -0.57
PTPN9-203ENST00000563835 TTF2Q9UNY4 1162 aaKnown RBP11.51□□□□□ -0.57
PTPN9-203ENST00000563835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.51□□□□□ -0.57
PTPN9-203ENST00000563835 UBE2Q2LH0YL09 131 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 CIAO1O76071 339 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 GNAI3P08754 354 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 IFIT1P09914 478 aaKnown RBP11.5□□□□□ -0.57
PTPN9-203ENST00000563835 RLBP1P12271 317 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 SLC5A1P13866 664 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 MAP2K2P36507 400 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPN9-203ENST00000563835 NOGQ13253 232 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 CAVIN4Q5BKX8 364 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 CASP8AP2Q9UKL3 1982 aa11.5□□□□□ -0.57
PTPN9-203ENST00000563835 PNMA6EA0A0J9YXQ4 647 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
PTPN9-203ENST00000563835 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 FRAT2O75474 233 aaPredicted RBP11.49□□□□□ -0.57
PTPN9-203ENST00000563835 ADORA1P30542 326 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 CRKP46108 304 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 MMP14P50281 582 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 KIF23Q02241 960 aaPredicted RBP11.49□□□□□ -0.57
PTPN9-203ENST00000563835 TTLL12Q14166 644 aaPredicted RBP11.49□□□□□ -0.57
PTPN9-203ENST00000563835 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 LPIN2Q92539 896 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 DEFB129Q9H1M3 183 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 TDRD3Q9H7E2 651 aaKnown RBP11.49□□□□□ -0.57
PTPN9-203ENST00000563835 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 COPRSQ9NQ92 184 aa11.49□□□□□ -0.57
PTPN9-203ENST00000563835 CAPN15O75808 1086 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 IL15P40933 162 aaPredicted RBP11.48□□□□□ -0.57
PTPN9-203ENST00000563835 PHKA1P46020 1223 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms