RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 TTLL12Q14166 644 aaPredicted RBP26.53■■□□□ 1.84
CHD9-208ENST00000563410 TAF7LQ5H9L4 462 aa26.53■■□□□ 1.84
CHD9-208ENST00000563410 MTMR14Q8NCE2 650 aa26.53■■□□□ 1.84
CHD9-208ENST00000563410 CNNM1Q9NRU3 951 aa26.53■■□□□ 1.84
CHD9-208ENST00000563410 PCDHAC2Q9Y5I4 1007 aa26.53■■□□□ 1.84
CHD9-208ENST00000563410 RGS19P49795 217 aa26.52■■□□□ 1.84
CHD9-208ENST00000563410 COL1A1P02452 1464 aaPredicted RBP26.51■■□□□ 1.83
CHD9-208ENST00000563410 UTYO14607 1347 aa26.51■■□□□ 1.83
CHD9-208ENST00000563410 NBPF7P0C2Y1 421 aaPredicted RBP26.51■■□□□ 1.83
CHD9-208ENST00000563410 FKBP1AP62942 108 aaKnown RBP26.51■■□□□ 1.83
CHD9-208ENST00000563410 DLGAP5Q15398 846 aa26.51■■□□□ 1.83
CHD9-208ENST00000563410 MRPL50Q8N5N7 158 aaKnown RBP26.5■■□□□ 1.83
CHD9-208ENST00000563410 PUS3Q9BZE2 481 aaKnown RBP26.5■■□□□ 1.83
CHD9-208ENST00000563410 JAG2Q9Y219 1238 aa26.5■■□□□ 1.83
CHD9-208ENST00000563410 ARAP2Q8WZ64 1704 aa26.5■■□□□ 1.83
CHD9-208ENST00000563410 F8W031 263 aaPredicted RBP26.49■■□□□ 1.83
CHD9-208ENST00000563410 PTPN12Q05209 780 aaKnown RBP26.49■■□□□ 1.83
CHD9-208ENST00000563410 PRKG1Q13976 671 aa26.49■■□□□ 1.83
CHD9-208ENST00000563410 CFAP100Q494V2 611 aa26.48■■□□□ 1.83
CHD9-208ENST00000563410 ARMC9Q7Z3E5 817 aa26.48■■□□□ 1.83
CHD9-208ENST00000563410 DEFB129Q9H1M3 183 aa26.48■■□□□ 1.83
CHD9-208ENST00000563410 FAM205AQ6ZU69 1335 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 SSC5DA1L4H1 1573 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 SPDYE2BA6NHP3 402 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 SPDYE6P0CI01 402 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 TM4SF4P48230 202 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 UBE4AQ14139 1066 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 LDLRAD1Q5T700 205 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 FZD1Q9UP38 647 aa26.47■■□□□ 1.83
CHD9-208ENST00000563410 LAMB1P07942 1786 aa26.46■■□□□ 1.83
CHD9-208ENST00000563410 AOX1Q06278 1338 aa26.46■■□□□ 1.83
CHD9-208ENST00000563410 RABL6Q3YEC7 729 aaPredicted RBP26.46■■□□□ 1.83
CHD9-208ENST00000563410 TDRD7Q8NHU6 1098 aaKnown RBP26.46■■□□□ 1.83
CHD9-208ENST00000563410 PRMT6Q96LA8 375 aaPredicted RBP26.46■■□□□ 1.83
CHD9-208ENST00000563410 BICC1Q9H694 974 aaKnown RBP26.46■■□□□ 1.83
CHD9-208ENST00000563410 RIPOR2Q9Y4F9 1068 aa26.46■■□□□ 1.83
CHD9-208ENST00000563410 GYG1P46976 350 aa26.45■■□□□ 1.82
CHD9-208ENST00000563410 MKRN3Q13064 507 aaKnown RBP26.45■■□□□ 1.82
CHD9-208ENST00000563410 FAM84BQ96KN1 310 aaPredicted RBP26.45■■□□□ 1.82
CHD9-208ENST00000563410 ANGEL1Q9UNK9 670 aaKnown RBP26.45■■□□□ 1.82
CHD9-208ENST00000563410 CLRN2A0PK11 232 aa26.44■■□□□ 1.82
CHD9-208ENST00000563410 MLLT1Q03111 559 aaPredicted RBP26.44■■□□□ 1.82
CHD9-208ENST00000563410 ANKRD44Q8N8A2 993 aa26.44■■□□□ 1.82
CHD9-208ENST00000563410 PPP2R3BQ9Y5P8 575 aa26.44■■□□□ 1.82
CHD9-208ENST00000563410 TBC1D8O95759 1140 aa26.43■■□□□ 1.82
CHD9-208ENST00000563410 HIBADHP31937 336 aaKnown RBP26.43■■□□□ 1.82
CHD9-208ENST00000563410 MAP3K11Q16584 847 aa26.43■■□□□ 1.82
CHD9-208ENST00000563410 CTU1Q7Z7A3 348 aaKnown RBP26.43■■□□□ 1.82
CHD9-208ENST00000563410 PTPRCP08575 1304 aa26.42■■□□□ 1.82
CHD9-208ENST00000563410 E9PSI1 815 aa26.42■■□□□ 1.82
CHD9-208ENST00000563410 SSH1Q8WYL5 1049 aa26.42■■□□□ 1.82
CHD9-208ENST00000563410 MROH5Q6ZUA9 1318 aa26.41■■□□□ 1.82
CHD9-208ENST00000563410 MYO1BO43795 1136 aa26.41■■□□□ 1.82
CHD9-208ENST00000563410 LRRC24Q50LG9 513 aa26.41■■□□□ 1.82
CHD9-208ENST00000563410 MFSD14BQ5SR56 506 aa26.41■■□□□ 1.82
CHD9-208ENST00000563410 SPRYD7Q5W111 196 aa26.41■■□□□ 1.82
CHD9-208ENST00000563410 SLFN5Q08AF3 891 aa26.4■■□□□ 1.82
CHD9-208ENST00000563410 ZNF296Q8WUU4 475 aaPredicted RBP26.4■■□□□ 1.82
CHD9-208ENST00000563410 VEZTQ9HBM0 779 aa26.4■■□□□ 1.82
CHD9-208ENST00000563410 OTOFQ9HC10 1997 aa26.4■■□□□ 1.82
CHD9-208ENST00000563410 RBM5P52756 815 aaKnown RBP eCLIP26.39■■□□□ 1.82
CHD9-208ENST00000563410 SREBF2Q12772 1141 aa26.39■■□□□ 1.82
CHD9-208ENST00000563410 NBPF12Q5TAG4 269 aaPredicted RBP26.39■■□□□ 1.82
CHD9-208ENST00000563410 FBXO33Q7Z6M2 555 aa26.38■■□□□ 1.81
CHD9-208ENST00000563410 VGLL2Q8N8G2 317 aa26.38■■□□□ 1.81
CHD9-208ENST00000563410 CLMNQ96JQ2 1002 aa26.38■■□□□ 1.81
CHD9-208ENST00000563410 USP44Q9H0E7 712 aa26.38■■□□□ 1.81
CHD9-208ENST00000563410 TTF2Q9UNY4 1162 aaKnown RBP26.38■■□□□ 1.81
CHD9-208ENST00000563410 TNRC18O15417 2968 aaPredicted RBP26.38■■□□□ 1.81
CHD9-208ENST00000563410 PPP1R12BO60237 982 aaPredicted RBP26.37■■□□□ 1.81
CHD9-208ENST00000563410 RASA3Q14644 834 aa26.37■■□□□ 1.81
CHD9-208ENST00000563410 KLHDC4Q8TBB5 520 aa26.37■■□□□ 1.81
CHD9-208ENST00000563410 SLC10A4Q96EP9 437 aa26.37■■□□□ 1.81
CHD9-208ENST00000563410 CFHR5Q9BXR6 569 aa26.37■■□□□ 1.81
CHD9-208ENST00000563410 SERPINA10Q9UK55 444 aa26.37■■□□□ 1.81
CHD9-208ENST00000563410 GPR25O00155 361 aa26.36■■□□□ 1.81
CHD9-208ENST00000563410 GRIK5Q16478 980 aa26.36■■□□□ 1.81
CHD9-208ENST00000563410 SUPT20HL1Q3ZLR7 823 aa26.36■■□□□ 1.81
CHD9-208ENST00000563410 SPDYE2Q495Y8 402 aa26.36■■□□□ 1.81
CHD9-208ENST00000563410 NOM1Q5C9Z4 860 aaKnown RBP26.36■■□□□ 1.81
CHD9-208ENST00000563410 R3HDMLQ9H3Y0 253 aa26.36■■□□□ 1.81
CHD9-208ENST00000563410 ZNF70Q9UC06 446 aaPredicted RBP26.36■■□□□ 1.81
CHD9-208ENST00000563410 USP2O75604 605 aaPredicted RBP26.35■■□□□ 1.81
CHD9-208ENST00000563410 METTL24Q5JXM2 366 aa26.35■■□□□ 1.81
CHD9-208ENST00000563410 CDCA7LQ96GN5 454 aa26.35■■□□□ 1.81
CHD9-208ENST00000563410 TDRD3Q9H7E2 651 aaKnown RBP26.35■■□□□ 1.81
CHD9-208ENST00000563410 IQSEC3Q9UPP2 1182 aaPredicted RBP26.35■■□□□ 1.81
CHD9-208ENST00000563410 MYH13Q9UKX3 1938 aa26.35■■□□□ 1.81
CHD9-208ENST00000563410 PDE4DIPQ5VU43 2346 aa26.34■■□□□ 1.81
CHD9-208ENST00000563410 UNCXA6NJT0 531 aa26.34■■□□□ 1.81
CHD9-208ENST00000563410 PDE8BO95263 885 aa26.34■■□□□ 1.81
CHD9-208ENST00000563410 ZBTB48P10074 688 aaPredicted RBP26.34■■□□□ 1.81
CHD9-208ENST00000563410 DZIP1LQ8IYY4 767 aaKnown RBP26.34■■□□□ 1.81
CHD9-208ENST00000563410 WNK4Q96J92 1243 aa26.34■■□□□ 1.81
CHD9-208ENST00000563410 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.34■■□□□ 1.81
CHD9-208ENST00000563410 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.81
CHD9-208ENST00000563410 MANSC4A6NHS7 340 aaPredicted RBP26.32■■□□□ 1.8
CHD9-208ENST00000563410 CRKP46108 304 aa26.32■■□□□ 1.8
CHD9-208ENST00000563410 VPS37DQ86XT2 251 aa26.32■■□□□ 1.8
CHD9-208ENST00000563410 TRMT2AQ8IZ69 625 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms