RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 INHBCP55103 352 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 RNF20Q5VTR2 975 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 CWF19L1Q69YN2 538 aaKnown RBP10.73□□□□□ -0.69
CDH1-205ENST00000562836 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 OR8K1Q8NGG5 319 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 THUMPD2Q9BTF0 503 aaKnown RBP10.73□□□□□ -0.69
CDH1-205ENST00000562836 CFAP45Q9UL16 551 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 ZNF510Q9Y2H8 683 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 CARMIL1Q5VZK9 1371 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
CDH1-205ENST00000562836 TMEM110-MUSTN1A8MSY1 372 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 GNAT2P19087 354 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 MYBPC3Q14896 1274 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 RAB3GAP1Q15042 981 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 ALKBH2Q6NS38 261 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 ERP27Q96DN0 273 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 C16orf45Q96MC5 204 aaPredicted RBP10.73□□□□□ -0.69
CDH1-205ENST00000562836 UIMC1Q96RL1 719 aa10.73□□□□□ -0.69
CDH1-205ENST00000562836 CHUKO15111 745 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 RNF8O76064 485 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 AMPD3Q01432 767 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 BTG3Q14201 252 aaPredicted RBP10.72□□□□□ -0.69
CDH1-205ENST00000562836 FILIP1Q7Z7B0 1213 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 LRRCC1Q9C099 1032 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 FYCO1Q9BQS8 1478 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 CEP104O60308 925 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 PRKAR2BP31323 418 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 EIF2B5Q13144 721 aaKnown RBP10.72□□□□□ -0.69
CDH1-205ENST00000562836 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
CDH1-205ENST00000562836 CLPPQ16740 277 aaPredicted RBP10.72□□□□□ -0.69
CDH1-205ENST00000562836 PARP10Q53GL7 1025 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 ATF7IPQ6VMQ6 1270 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 LCA5Q86VQ0 697 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 MFN1Q8IWA4 741 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 SMYD1Q8NB12 490 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 ERMNQ8TAM6 284 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
CDH1-205ENST00000562836 C2orf49Q9BVC5 232 aaPredicted RBP10.72□□□□□ -0.69
CDH1-205ENST00000562836 WDR37Q9Y2I8 494 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 PCDHGC5Q9Y5F6 944 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDH1-205ENST00000562836 NLRP1Q9C000 1473 aa10.72□□□□□ -0.69
CDH1-205ENST00000562836 MCM2P49736 904 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 DDR1Q08345 913 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 EIF4A2Q14240 407 aaKnown RBP10.71□□□□□ -0.69
CDH1-205ENST00000562836 GPR162Q16538 588 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 LRSAM1Q6UWE0 723 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 RNF168Q8IYW5 571 aaPredicted RBP10.71□□□□□ -0.69
CDH1-205ENST00000562836 FNBP4Q8N3X1 1017 aaPredicted RBP10.71□□□□□ -0.69
CDH1-205ENST00000562836 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.69
CDH1-205ENST00000562836 FAM160A1Q05DH4 1040 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 PDGFDQ9GZP0 370 aaPredicted RBP10.71□□□□□ -0.69
CDH1-205ENST00000562836 PLEKHA4Q9H4M7 779 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 IFT122Q9HBG6 1241 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 MRGBPQ9NV56 204 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 PRR12Q9ULL5 1215 aa10.71□□□□□ -0.69
CDH1-205ENST00000562836 SYCE3A1L190 88 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 DDIT3P35638 169 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 CLCN6P51797 869 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 ZNF131P52739 623 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 SMARCC2Q8TAQ2 1214 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 CABS1Q96KC9 395 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 SPATA17Q96L03 361 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 YIPF3Q9GZM5 350 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 TUBGCP4Q9UGJ1 667 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 TIMM22Q9Y584 194 aa10.71□□□□□ -0.7
CDH1-205ENST00000562836 HFM1A2PYH4 1435 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 FOXD2O60548 495 aaPredicted RBP10.7□□□□□ -0.7
CDH1-205ENST00000562836 CUL4BQ13620 913 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 CCBE1Q6UXH8 406 aaPredicted RBP10.7□□□□□ -0.7
CDH1-205ENST00000562836 SENP7Q9BQF6 1050 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
CDH1-205ENST00000562836 ZNF304Q9HCX3 659 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 CCDC18Q5T9S5 1454 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 AHCYL1O43865 530 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
CDH1-205ENST00000562836 USP11P51784 963 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 WLSQ5T9L3 541 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 SLC5A4Q9NY91 659 aa10.7□□□□□ -0.7
CDH1-205ENST00000562836 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 MYCP01106 439 aaPredicted RBP10.69□□□□□ -0.7
CDH1-205ENST00000562836 FESP07332 822 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 H2AFXP16104 143 aaPredicted RBP10.69□□□□□ -0.7
CDH1-205ENST00000562836 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
CDH1-205ENST00000562836 PAPOLAP51003 745 aaKnown RBP10.69□□□□□ -0.7
CDH1-205ENST00000562836 PABPC4Q13310 644 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH1-205ENST00000562836 ARHGEF6Q15052 776 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 SHROOM1Q2M3G4 852 aaPredicted RBP10.69□□□□□ -0.7
CDH1-205ENST00000562836 MAP7D1Q3KQU3 841 aa10.69□□□□□ -0.7
CDH1-205ENST00000562836 FAM76AQ8TAV0 307 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms