RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 USP17L8P0C7I0 530 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 MAP2K1Q02750 393 aaPredicted RBP20.32■□□□□ 0.84
PKD1-226ENST00000562425 ATP2B3Q16720 1220 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 FBXO33Q7Z6M2 555 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 OGFOD1Q8N543 542 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
PKD1-226ENST00000562425 ZBTB40Q9NUA8 1239 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 AKAP2Q9Y2D5 859 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 FRAT2O75474 233 aaPredicted RBP20.31■□□□□ 0.84
PKD1-226ENST00000562425 CEP85Q6P2H3 762 aa20.31■□□□□ 0.84
PKD1-226ENST00000562425 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
PKD1-226ENST00000562425 GMLQ99445 158 aa20.31■□□□□ 0.84
PKD1-226ENST00000562425 SCN9AQ15858 1988 aa20.3■□□□□ 0.84
PKD1-226ENST00000562425 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
PKD1-226ENST00000562425 C20orf194Q5TEA3 1177 aa20.3■□□□□ 0.84
PKD1-226ENST00000562425 ZC3H15Q8WU90 426 aaKnown RBP20.3■□□□□ 0.84
PKD1-226ENST00000562425 ABT1Q9ULW3 272 aaKnown RBP20.3■□□□□ 0.84
PKD1-226ENST00000562425 TRPM7Q96QT4 1865 aa20.3■□□□□ 0.84
PKD1-226ENST00000562425 WDR33Q9C0J8 1336 aaKnown RBP20.29■□□□□ 0.84
PKD1-226ENST00000562425 SURF6O75683 361 aaKnown RBP20.29■□□□□ 0.84
PKD1-226ENST00000562425 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
PKD1-226ENST00000562425 ZNF280AP59817 542 aaPredicted RBP20.29■□□□□ 0.84
PKD1-226ENST00000562425 FKBP1AP62942 108 aaKnown RBP20.29■□□□□ 0.84
PKD1-226ENST00000562425 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
PKD1-226ENST00000562425 HDAC9Q9UKV0 1011 aa20.29■□□□□ 0.84
PKD1-226ENST00000562425 FAM205AQ6ZU69 1335 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 THSD7BQ9C0I4 1608 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 HMMRO75330 724 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 BCAMP50895 628 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 TFCP2Q12800 502 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 TBC1D10BQ4KMP7 808 aaPredicted RBP20.28■□□□□ 0.84
PKD1-226ENST00000562425 RBM26Q5T8P6 1007 aaKnown RBP20.28■□□□□ 0.84
PKD1-226ENST00000562425 SAMD7Q7Z3H4 446 aa20.28■□□□□ 0.84
PKD1-226ENST00000562425 NOP58Q9Y2X3 529 aaKnown RBP20.28■□□□□ 0.84
PKD1-226ENST00000562425 ECE1P42892 770 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 LBX1P52954 281 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 KIF4BQ2VIQ3 1234 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 TRPM4Q8TD43 1214 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 MXD3Q9BW11 206 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 PGAP2Q9UHJ9 254 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 PSME4Q14997 1843 aa20.27■□□□□ 0.84
PKD1-226ENST00000562425 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
PKD1-226ENST00000562425 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
PKD1-226ENST00000562425 KIAA0825Q8IV33 1275 aa20.26■□□□□ 0.83
PKD1-226ENST00000562425 TBC1D22AQ8WUA7 517 aa20.26■□□□□ 0.83
PKD1-226ENST00000562425 MYOZ2Q9NPC6 264 aa20.26■□□□□ 0.83
PKD1-226ENST00000562425 A0A1B0GUL7 405 aa20.25■□□□□ 0.83
PKD1-226ENST00000562425 HSPA8P11142 646 aaKnown RBP20.25■□□□□ 0.83
PKD1-226ENST00000562425 IQSEC3Q9UPP2 1182 aaPredicted RBP20.25■□□□□ 0.83
PKD1-226ENST00000562425 TIMM10P62072 90 aa20.24■□□□□ 0.83
PKD1-226ENST00000562425 MFSD14BQ5SR56 506 aa20.24■□□□□ 0.83
PKD1-226ENST00000562425 NEUROD6Q96NK8 337 aa20.24■□□□□ 0.83
PKD1-226ENST00000562425 GPR108Q9NPR9 543 aa20.24■□□□□ 0.83
PKD1-226ENST00000562425 JAG2Q9Y219 1238 aa20.24■□□□□ 0.83
PKD1-226ENST00000562425 SEMA3EO15041 775 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 CHAF1AQ13111 956 aaPredicted RBP20.23■□□□□ 0.83
PKD1-226ENST00000562425 GORABQ5T7V8 394 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 CDC37L1Q7L3B6 337 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 CERS5Q8N5B7 392 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
PKD1-226ENST00000562425 CAPNS2Q96L46 248 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 BEGAINQ9BUH8 593 aa20.23■□□□□ 0.83
PKD1-226ENST00000562425 EGFRP00533 1210 aa20.22■□□□□ 0.83
PKD1-226ENST00000562425 SCARF1Q14162 830 aa20.22■□□□□ 0.83
PKD1-226ENST00000562425 WDR66Q8TBY9 1149 aa20.22■□□□□ 0.83
PKD1-226ENST00000562425 XAGE2Q96GT9 111 aa20.22■□□□□ 0.83
PKD1-226ENST00000562425 ZBTB22O15209 634 aa20.21■□□□□ 0.83
PKD1-226ENST00000562425 CCDC102BQ68D86 513 aa20.21■□□□□ 0.83
PKD1-226ENST00000562425 DENND2AQ9ULE3 1009 aa20.21■□□□□ 0.83
PKD1-226ENST00000562425 TLL2Q9Y6L7 1015 aa20.21■□□□□ 0.83
PKD1-226ENST00000562425 F8W031 263 aaPredicted RBP20.2■□□□□ 0.82
PKD1-226ENST00000562425 ADORA1P30542 326 aa20.2■□□□□ 0.82
PKD1-226ENST00000562425 PHKA1P46020 1223 aa20.2■□□□□ 0.82
PKD1-226ENST00000562425 DLGAP5Q15398 846 aa20.2■□□□□ 0.82
PKD1-226ENST00000562425 TNNI3KQ59H18 835 aa20.2■□□□□ 0.82
PKD1-226ENST00000562425 SUGT1Q9Y2Z0 365 aa20.2■□□□□ 0.82
PKD1-226ENST00000562425 FPGT-TNNI3KV9GXZ4 949 aa20.2■□□□□ 0.82
PKD1-226ENST00000562425 MAP2K2P36507 400 aa20.19■□□□□ 0.82
PKD1-226ENST00000562425 CST9Q5W186 159 aa20.19■□□□□ 0.82
PKD1-226ENST00000562425 PAXIP1Q6ZW49 1069 aaPredicted RBP20.19■□□□□ 0.82
PKD1-226ENST00000562425 SULF1Q8IWU6 871 aa20.19■□□□□ 0.82
PKD1-226ENST00000562425 HHIPL1Q96JK4 782 aa20.19■□□□□ 0.82
PKD1-226ENST00000562425 TTF2Q9UNY4 1162 aaKnown RBP20.19■□□□□ 0.82
PKD1-226ENST00000562425 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
PKD1-226ENST00000562425 KRT26Q7Z3Y9 468 aa20.18■□□□□ 0.82
PKD1-226ENST00000562425 SIRT2Q8IXJ6 389 aa20.18■□□□□ 0.82
PKD1-226ENST00000562425 MTMR14Q8NCE2 650 aa20.18■□□□□ 0.82
PKD1-226ENST00000562425 ABHD8Q96I13 439 aa20.18■□□□□ 0.82
PKD1-226ENST00000562425 GLIS2Q9BZE0 524 aaPredicted RBP20.18■□□□□ 0.82
PKD1-226ENST00000562425 GGA3Q9NZ52 723 aa20.18■□□□□ 0.82
PKD1-226ENST00000562425 TRAF5O00463 557 aa20.17■□□□□ 0.82
PKD1-226ENST00000562425 WNT10BO00744 389 aa20.17■□□□□ 0.82
PKD1-226ENST00000562425 CA12O43570 354 aa20.17■□□□□ 0.82
PKD1-226ENST00000562425 MYO1BO43795 1136 aa20.17■□□□□ 0.82
PKD1-226ENST00000562425 RAB11FIP3O75154 756 aa20.17■□□□□ 0.82
PKD1-226ENST00000562425 RBM5P52756 815 aaKnown RBP eCLIP20.17■□□□□ 0.82
PKD1-226ENST00000562425 NBPF9Q3BBW0 867 aa20.17■□□□□ 0.82
PKD1-226ENST00000562425 CCDC158Q5M9N0 1113 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms