RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
CTDSPL2-209ENST00000560620 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
CTDSPL2-209ENST00000560620 ASTN2O75129 1339 aaPredicted RBP16.12■□□□□ 0.17
CTDSPL2-209ENST00000560620 TRPM7Q96QT4 1865 aa16.12■□□□□ 0.17
CTDSPL2-209ENST00000560620 ADM5C9JUS6 153 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 MS4A1P11836 297 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 RLBP1P12271 317 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 BCAMP50895 628 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 GRM1Q13255 1194 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 ATP2B3Q16720 1220 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 DEFB115Q30KQ5 88 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 TDRD7Q8NHU6 1098 aaKnown RBP16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 LPIN2Q92539 896 aa16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
CTDSPL2-209ENST00000560620 MMP14P50281 582 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 NBPF9Q3BBW0 867 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 MFSD14BQ5SR56 506 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 CST9Q5W186 159 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 DLK2Q6UY11 383 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 CERS5Q8N5B7 392 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 PANK1Q8TE04 598 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 C1orf115Q9H7X2 142 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 COPRSQ9NQ92 184 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 CNTNAP1P78357 1384 aa16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 ZNF646O15015 1829 aaPredicted RBP16.1■□□□□ 0.17
CTDSPL2-209ENST00000560620 WNT10BO00744 389 aa16.09■□□□□ 0.17
CTDSPL2-209ENST00000560620 MTX1Q13505 466 aa16.09■□□□□ 0.17
CTDSPL2-209ENST00000560620 DLGAP5Q15398 846 aa16.09■□□□□ 0.17
CTDSPL2-209ENST00000560620 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
CTDSPL2-209ENST00000560620 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
CTDSPL2-209ENST00000560620 PNMA6EA0A0J9YXQ4 647 aa16.08■□□□□ 0.16
CTDSPL2-209ENST00000560620 FGFR2P21802 821 aa16.08■□□□□ 0.16
CTDSPL2-209ENST00000560620 FKBP1AP62942 108 aaKnown RBP16.08■□□□□ 0.16
CTDSPL2-209ENST00000560620 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.16
CTDSPL2-209ENST00000560620 FAM205AQ6ZU69 1335 aa16.08■□□□□ 0.16
CTDSPL2-209ENST00000560620 MYO1BO43795 1136 aa16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 VEGFBP49765 207 aa16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 OS9Q13438 667 aaPredicted RBP16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 C2orf69Q8N8R5 385 aa16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 JMYQ8N9B5 988 aa16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 TTF2Q9UNY4 1162 aaKnown RBP16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 TLL2Q9Y6L7 1015 aa16.07■□□□□ 0.16
CTDSPL2-209ENST00000560620 PITPNM2Q9BZ72 1349 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 RASSF10A6NK89 507 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 TFCP2Q12800 502 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 TBC1D22AQ8WUA7 517 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 CDCA5Q96FF9 252 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 GNL3LQ9NVN8 582 aaKnown RBP16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 AKAP2Q9Y2D5 859 aa16.06■□□□□ 0.16
CTDSPL2-209ENST00000560620 ECE1P42892 770 aa16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 TIMM10P62072 90 aa16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 CYP4F22Q6NT55 531 aa16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 NEUROD6Q96NK8 337 aa16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 COG6Q9Y2V7 657 aa16.05■□□□□ 0.16
CTDSPL2-209ENST00000560620 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 HUNKP57058 714 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 GORABQ5T7V8 394 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 PRAMEF18Q5VWM3 479 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 CAPNS2Q96L46 248 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 PCDHAC2Q9Y5I4 1007 aa16.04■□□□□ 0.16
CTDSPL2-209ENST00000560620 A0A1B0GUL7 405 aa16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 CLRN2A0PK11 232 aa16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 ADORA1P30542 326 aa16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 NF2P35240 595 aa16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 TTLL12Q14166 644 aaPredicted RBP16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 VEZTQ9HBM0 779 aa16.03■□□□□ 0.16
CTDSPL2-209ENST00000560620 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 HSPA1AP0DMV8 641 aaKnown RBP16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 HSPA1BP0DMV9 641 aaKnown RBP16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 PHKA1P46020 1223 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 MTMR14Q8NCE2 650 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 PRMT6Q96LA8 375 aaPredicted RBP16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 SERPINA10Q9UK55 444 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.16
CTDSPL2-209ENST00000560620 PCNTO95613 3336 aa16.02■□□□□ 0.15
CTDSPL2-209ENST00000560620 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.15
CTDSPL2-209ENST00000560620 MAST3O60307 1309 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 CRKP46108 304 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 POLA2Q14181 598 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 GRIK5Q16478 980 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 CCDC102BQ68D86 513 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 TEKT1Q969V4 418 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 XAGE2Q96GT9 111 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 CHMP4BQ9H444 224 aaKnown RBP16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 DENND2AQ9ULE3 1009 aa16.01■□□□□ 0.15
CTDSPL2-209ENST00000560620 CEP85Q6P2H3 762 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms