RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 BCAR3O75815 825 aa17.58■□□□□ 0.41
TNFAIP2-207ENST00000560562 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.41
TNFAIP2-207ENST00000560562 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.41
TNFAIP2-207ENST00000560562 OGFOD1Q8N543 542 aa17.58■□□□□ 0.41
TNFAIP2-207ENST00000560562 TDRD7Q8NHU6 1098 aaKnown RBP17.58■□□□□ 0.41
TNFAIP2-207ENST00000560562 MEIS3Q99687 375 aa17.58■□□□□ 0.41
TNFAIP2-207ENST00000560562 CASP8AP2Q9UKL3 1982 aa17.58■□□□□ 0.4
TNFAIP2-207ENST00000560562 FAM155AB1AL88 458 aaPredicted RBP17.57■□□□□ 0.4
TNFAIP2-207ENST00000560562 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
TNFAIP2-207ENST00000560562 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
TNFAIP2-207ENST00000560562 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
TNFAIP2-207ENST00000560562 AKAP11Q9UKA4 1901 aa17.57■□□□□ 0.4
TNFAIP2-207ENST00000560562 F8W031 263 aaPredicted RBP17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 UBTFL1P0CB47 393 aaPredicted RBP17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 MAP2K1Q02750 393 aaPredicted RBP17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 MOB2Q70IA6 237 aa17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
TNFAIP2-207ENST00000560562 PDE8BO95263 885 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 TRIM27P14373 513 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 FGFR2P21802 821 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 HIBADHP31937 336 aaKnown RBP17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 CTCFP49711 727 aaPredicted RBP17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 LBX1P52954 281 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 GRIK5Q16478 980 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 INTS3Q68E01 1043 aaKnown RBP17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 FBXO33Q7Z6M2 555 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 IQSEC3Q9UPP2 1182 aaPredicted RBP17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 EYA2O00167 538 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 MAP2K2P36507 400 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 FKBP1AP62942 108 aaKnown RBP17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 RGMBQ6NW40 437 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 C2orf69Q8N8R5 385 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 HDAC9Q9UKV0 1011 aa17.55■□□□□ 0.4
TNFAIP2-207ENST00000560562 SSC5DA1L4H1 1573 aa17.54■□□□□ 0.4
TNFAIP2-207ENST00000560562 MTMR14Q8NCE2 650 aa17.54■□□□□ 0.4
TNFAIP2-207ENST00000560562 TSKSQ9UJT2 592 aa17.54■□□□□ 0.4
TNFAIP2-207ENST00000560562 OTOFQ9HC10 1997 aa17.54■□□□□ 0.4
TNFAIP2-207ENST00000560562 COL1A1P02452 1464 aaPredicted RBP17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 MMP14P50281 582 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 BCAMP50895 628 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 CFAP100Q494V2 611 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 TNS4Q8IZW8 715 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 PRMT6Q96LA8 375 aaPredicted RBP17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 SIL1Q9H173 461 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 PRDM10Q9NQV6 1147 aa17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
TNFAIP2-207ENST00000560562 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
TNFAIP2-207ENST00000560562 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
TNFAIP2-207ENST00000560562 DLGAP5Q15398 846 aa17.52■□□□□ 0.4
TNFAIP2-207ENST00000560562 SLC10A3P09131 477 aa17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 ZNF157P51786 506 aaPredicted RBP17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 NOGQ13253 232 aa17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 PUM3Q15397 648 aaKnown RBP17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 LAMB1P07942 1786 aa17.51■□□□□ 0.39
TNFAIP2-207ENST00000560562 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
TNFAIP2-207ENST00000560562 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
TNFAIP2-207ENST00000560562 RASAL3Q86YV0 1011 aa17.5■□□□□ 0.39
TNFAIP2-207ENST00000560562 APOBEC3FQ8IUX4 373 aaKnown RBP17.5■□□□□ 0.39
TNFAIP2-207ENST00000560562 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
TNFAIP2-207ENST00000560562 FKBP1BP68106 108 aa17.49■□□□□ 0.39
TNFAIP2-207ENST00000560562 CHAF1AQ13111 956 aaPredicted RBP17.49■□□□□ 0.39
TNFAIP2-207ENST00000560562 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
TNFAIP2-207ENST00000560562 CIAO1O76071 339 aa17.48■□□□□ 0.39
TNFAIP2-207ENST00000560562 KIF23Q02241 960 aaPredicted RBP17.48■□□□□ 0.39
TNFAIP2-207ENST00000560562 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
TNFAIP2-207ENST00000560562 DEFB129Q9H1M3 183 aa17.48■□□□□ 0.39
TNFAIP2-207ENST00000560562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.48■□□□□ 0.39
TNFAIP2-207ENST00000560562 PRKG1Q13976 671 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 LPIN2Q92539 896 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 CCDC102AQ96A19 550 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 IPO8O15397 1037 aaKnown RBP17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 RBM5P52756 815 aaKnown RBP eCLIP17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 MTX1Q13505 466 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 VEZTQ9HBM0 779 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 SERPINA10Q9UK55 444 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
TNFAIP2-207ENST00000560562 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 GNAI3P08754 354 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 SLC5A1P13866 664 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 CRKP46108 304 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 ATP2B3Q16720 1220 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 CDAN1Q8IWY9 1227 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 BEGAINQ9BUH8 593 aa17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 TDRD3Q9H7E2 651 aaKnown RBP17.46■□□□□ 0.39
TNFAIP2-207ENST00000560562 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms