RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 TMC4Q7Z404 712 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 RNF34Q969K3 372 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 CITED4Q96RK1 184 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 PRKAG2Q9UGJ0 569 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 FAM135AQ9P2D6 1515 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 SIGLEC1Q9BZZ2 1709 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 YEATS2Q9ULM3 1422 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 EIF2AK4Q9P2K8 1649 aaKnown RBP8.36□□□□□ -1.07
USP8-210ENST00000560379 RAPGEF3O95398 923 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 ITGAEP38570 1179 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 DAB2P98082 770 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 EHHADHQ08426 723 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 C7orf43Q8WVR3 580 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 SCG3Q8WXD2 468 aaKnown RBP8.36□□□□□ -1.07
USP8-210ENST00000560379 LNPKQ9C0E8 428 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 CCSER2Q9H7U1 834 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 PRDM16Q9HAZ2 1276 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 CAPN10Q9HC96 672 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 METTL5Q9NRN9 209 aaKnown RBP8.36□□□□□ -1.07
USP8-210ENST00000560379 CABP1Q9NZU7 370 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 ATP10AO60312 1499 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 ADAMTSL3P82987 1691 aa8.36□□□□□ -1.07
USP8-210ENST00000560379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
USP8-210ENST00000560379 SPATA31C1P0DKV0 1188 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 TATP17735 454 aaPredicted RBP8.35□□□□□ -1.07
USP8-210ENST00000560379 PSMD2Q13200 908 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 DHX38Q92620 1227 aaKnown RBP8.35□□□□□ -1.07
USP8-210ENST00000560379 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
USP8-210ENST00000560379 SAP130Q9H0E3 1048 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 CCDC87Q9NVE4 849 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 MARK1Q9P0L2 795 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 VTI1BQ9UEU0 232 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 FER1L4A9Z1Z3 1794 aa8.35□□□□□ -1.07
USP8-210ENST00000560379 ELOA3CA0A087WX78 387 aaPredicted RBP8.34□□□□□ -1.07
USP8-210ENST00000560379 ELOA3DA6NLF2 546 aaPredicted RBP8.34□□□□□ -1.07
USP8-210ENST00000560379 ATP2B1P20020 1258 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 GATA4P43694 442 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 EPHA4P54764 986 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 AAMPQ13685 434 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 ELOA3BQ3SY89 546 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 NKAPLQ5M9Q1 402 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 SYT9Q86SS6 491 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 NOP9Q86U38 636 aaKnown RBP8.34□□□□□ -1.07
USP8-210ENST00000560379 ELOA3Q8NG57 546 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
USP8-210ENST00000560379 WWC3Q9ULE0 1092 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 STARD13Q9Y3M8 1113 aa8.34□□□□□ -1.07
USP8-210ENST00000560379 ADGRL2O95490 1459 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 RNF17Q9BXT8 1623 aaKnown RBP8.33□□□□□ -1.08
USP8-210ENST00000560379 FZD6O60353 706 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 IGHA2P01877 340 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 GTF2F1P35269 517 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP8-210ENST00000560379 ZNF76P36508 570 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
USP8-210ENST00000560379 DAPK1P53355 1430 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 LAMC2Q13753 1193 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 SH3PXD2AQ5TCZ1 1133 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 TNS4Q8IZW8 715 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 NLRP2Q9NX02 1062 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 RRBP1Q9P2E9 1410 aaKnown RBP8.33□□□□□ -1.08
USP8-210ENST00000560379 PRR12Q9ULL5 1215 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 MROH2AA6NES4 1674 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 ATAD2Q6PL18 1390 aa8.33□□□□□ -1.08
USP8-210ENST00000560379 MADDQ8WXG6 1647 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 A2MP01023 1474 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 SPAG9O60271 1321 aaKnown RBP8.32□□□□□ -1.08
USP8-210ENST00000560379 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 EML1O00423 815 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 GPR182O15218 404 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 ATP2B2Q01814 1243 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 C8orf86Q6ZUL3 223 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 SETDB2Q96T68 719 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 TPSG1Q9NRR2 321 aa8.32□□□□□ -1.08
USP8-210ENST00000560379 ZC3H13Q5T200 1668 aaKnown RBP8.32□□□□□ -1.08
USP8-210ENST00000560379 DUOX2Q9NRD8 1548 aa8.31□□□□□ -1.08
USP8-210ENST00000560379 IRX6P78412 446 aaPredicted RBP8.31□□□□□ -1.08
USP8-210ENST00000560379 LRRC69Q6ZNQ3 347 aa8.31□□□□□ -1.08
USP8-210ENST00000560379 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
USP8-210ENST00000560379 AFAP1Q8N556 730 aa8.31□□□□□ -1.08
USP8-210ENST00000560379 ZNF526Q8TF50 670 aaPredicted RBP8.31□□□□□ -1.08
USP8-210ENST00000560379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.31□□□□□ -1.08
USP8-210ENST00000560379 ZNF644Q9H582 1327 aaPredicted RBP8.3□□□□□ -1.08
USP8-210ENST00000560379 ABCC5O15440 1437 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 ERBINQ96RT1 1412 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 DEPDC5O75140 1603 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 BACH1O14867 736 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 ALBP02768 609 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 TNNI2P48788 182 aa8.3□□□□□ -1.08
USP8-210ENST00000560379 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms