RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 CIAPIN1Q6FI81 312 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 PNMA8AQ86V59 439 aaPredicted RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 DPF2Q92785 391 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 GPR101Q96P66 508 aaPredicted RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 ZC3H12CQ9C0D7 883 aaKnown RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 ECM29Q5VYK3 1845 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 TRPM7Q96QT4 1865 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 ECE2O60344 883 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 PDE8BO95263 885 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 IL1R1P14778 569 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 FGFR2P21802 821 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 GMPSP49915 693 aaPredicted RBP9.69□□□□□ -0.86
RTF1-205ENST00000558298 TNIP1Q15025 636 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 KIAA1211Q6ZU35 1233 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 ATG9AQ7Z3C6 839 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 MYO3BQ8WXR4 1341 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 SNX21Q969T3 373 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 GTPBP4Q9BZE4 634 aaKnown RBP9.69□□□□□ -0.86
RTF1-205ENST00000558298 RWDD1Q9H446 243 aaPredicted RBP9.69□□□□□ -0.86
RTF1-205ENST00000558298 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 KCNQ5Q9NR82 932 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 CNNM1Q9NRU3 951 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 PGAP2Q9UHJ9 254 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
RTF1-205ENST00000558298 PDS5AQ29RF7 1337 aaKnown RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 C6orf229H3BNL8 230 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 PSMD14O00487 310 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 SRGAP3O43295 1099 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 ZNF500O60304 480 aaPredicted RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 RAD17O75943 681 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 VIL1P09327 827 aaKnown RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 HIRAP54198 1017 aaPredicted RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 HTRA3P83110 453 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 ATP8B2P98198 1209 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 PUM3Q15397 648 aaKnown RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 CEP85Q6P2H3 762 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 USP50Q70EL3 339 aaPredicted RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 TXNRD3Q86VQ6 643 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 RPAP2Q8IXW5 612 aaPredicted RBP9.68□□□□□ -0.86
RTF1-205ENST00000558298 JMYQ8N9B5 988 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 PANK1Q8TE04 598 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 GMLQ99445 158 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 GJA3Q9Y6H8 435 aa9.68□□□□□ -0.86
RTF1-205ENST00000558298 PCNTO95613 3336 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 FAM205AQ6ZU69 1335 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 IGSF3O75054 1194 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 KLRK1P26718 216 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 RGS3P49796 1198 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 LRRC24Q50LG9 513 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 STRIP1Q5VSL9 837 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 CLEC17AQ6ZS10 378 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 AGBL3Q8NEM8 1001 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 LPIN2Q92539 896 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
RTF1-205ENST00000558298 PUS3Q9BZE2 481 aaKnown RBP9.67□□□□□ -0.86
RTF1-205ENST00000558298 GPR108Q9NPR9 543 aa9.67□□□□□ -0.86
RTF1-205ENST00000558298 ADARB2Q9NS39 739 aaKnown RBP9.67□□□□□ -0.86
RTF1-205ENST00000558298 PNMA6EA0A0J9YXQ4 647 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 LETM1O95202 739 aaPredicted RBP9.66□□□□□ -0.86
RTF1-205ENST00000558298 EGFRP00533 1210 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
RTF1-205ENST00000558298 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
RTF1-205ENST00000558298 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 METTL24Q5JXM2 366 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 ZNF804AQ7Z570 1209 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 KLRG1Q96E93 195 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 TBC1D2Q9BYX2 928 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 SLKQ9H2G2 1235 aaPredicted RBP9.66□□□□□ -0.86
RTF1-205ENST00000558298 CD209Q9NNX6 404 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
RTF1-205ENST00000558298 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
RTF1-205ENST00000558298 AKAP11Q9UKA4 1901 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 SEMA3EO15041 775 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 HMMRO75330 724 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 KCNJ4P48050 445 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 ZNF280AP59817 542 aaPredicted RBP9.65□□□□□ -0.86
RTF1-205ENST00000558298 EAPPQ56P03 285 aaPredicted RBP9.65□□□□□ -0.86
RTF1-205ENST00000558298 HSP90AB4PQ58FF6 505 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 DACT2Q5SW24 774 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
RTF1-205ENST00000558298 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 MICALL2Q8IY33 904 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 TDRD7Q8NHU6 1098 aaKnown RBP9.65□□□□□ -0.86
RTF1-205ENST00000558298 KLHDC4Q8TBB5 520 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 ZC3H15Q8WU90 426 aaKnown RBP9.65□□□□□ -0.86
RTF1-205ENST00000558298 SUGT1Q9Y2Z0 365 aa9.65□□□□□ -0.86
RTF1-205ENST00000558298 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.87
RTF1-205ENST00000558298 CNTNAP1P78357 1384 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 USP17L3A6NCW0 530 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 USP17L4A6NCW7 530 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 SNAP23O00161 211 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 PLIN1O60240 522 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 TAF5LO75529 589 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 SASH1O94885 1247 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms