RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 NBPF7P0C2Y1 421 aaPredicted RBP20.73■□□□□ 0.91
RPL28-205ENST00000558131 RGS19P49795 217 aa20.73■□□□□ 0.91
RPL28-205ENST00000558131 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
RPL28-205ENST00000558131 LDHAL6AQ6ZMR3 332 aa20.72■□□□□ 0.91
RPL28-205ENST00000558131 APOBEC3FQ8IUX4 373 aaKnown RBP20.72■□□□□ 0.91
RPL28-205ENST00000558131 HDAC9Q9UKV0 1011 aa20.72■□□□□ 0.91
RPL28-205ENST00000558131 MYH13Q9UKX3 1938 aa20.71■□□□□ 0.91
RPL28-205ENST00000558131 FKBP1AP62942 108 aaKnown RBP20.71■□□□□ 0.91
RPL28-205ENST00000558131 CCDC57Q2TAC2 916 aa20.71■□□□□ 0.91
RPL28-205ENST00000558131 SLC4A10Q6U841 1118 aa20.71■□□□□ 0.91
RPL28-205ENST00000558131 ZNF804AQ7Z570 1209 aa20.71■□□□□ 0.91
RPL28-205ENST00000558131 MRPL50Q8N5N7 158 aaKnown RBP20.71■□□□□ 0.91
RPL28-205ENST00000558131 PUS3Q9BZE2 481 aaKnown RBP20.71■□□□□ 0.91
RPL28-205ENST00000558131 C9orf78Q9NZ63 289 aaPredicted RBP20.71■□□□□ 0.91
RPL28-205ENST00000558131 FZD1Q9UP38 647 aa20.71■□□□□ 0.91
RPL28-205ENST00000558131 RABL6Q3YEC7 729 aaPredicted RBP20.7■□□□□ 0.9
RPL28-205ENST00000558131 REM2Q8IYK8 340 aaPredicted RBP20.7■□□□□ 0.9
RPL28-205ENST00000558131 JAG2Q9Y219 1238 aa20.7■□□□□ 0.9
RPL28-205ENST00000558131 CENPFP49454 3210 aa20.7■□□□□ 0.9
RPL28-205ENST00000558131 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
RPL28-205ENST00000558131 LDLRAD1Q5T700 205 aa20.69■□□□□ 0.9
RPL28-205ENST00000558131 ANKRD44Q8N8A2 993 aa20.69■□□□□ 0.9
RPL28-205ENST00000558131 CNNM1Q9NRU3 951 aa20.69■□□□□ 0.9
RPL28-205ENST00000558131 FAM205AQ6ZU69 1335 aa20.69■□□□□ 0.9
RPL28-205ENST00000558131 SPDYE2BA6NHP3 402 aa20.68■□□□□ 0.9
RPL28-205ENST00000558131 SPDYE6P0CI01 402 aa20.68■□□□□ 0.9
RPL28-205ENST00000558131 PRMT6Q96LA8 375 aaPredicted RBP20.68■□□□□ 0.9
RPL28-205ENST00000558131 DEFB129Q9H1M3 183 aa20.68■□□□□ 0.9
RPL28-205ENST00000558131 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
RPL28-205ENST00000558131 RIPOR2Q9Y4F9 1068 aa20.68■□□□□ 0.9
RPL28-205ENST00000558131 BRCA2P51587 3418 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 F8W031 263 aaPredicted RBP20.67■□□□□ 0.9
RPL28-205ENST00000558131 PLIN1O60240 522 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 TM4SF4P48230 202 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 UBE4AQ14139 1066 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 DLGAP5Q15398 846 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 CFAP100Q494V2 611 aa20.67■□□□□ 0.9
RPL28-205ENST00000558131 TDRD7Q8NHU6 1098 aaKnown RBP20.67■□□□□ 0.9
RPL28-205ENST00000558131 NF2P35240 595 aa20.66■□□□□ 0.9
RPL28-205ENST00000558131 GYG1P46976 350 aa20.66■□□□□ 0.9
RPL28-205ENST00000558131 PRKG1Q13976 671 aa20.66■□□□□ 0.9
RPL28-205ENST00000558131 TTLL12Q14166 644 aaPredicted RBP20.66■□□□□ 0.9
RPL28-205ENST00000558131 TAF7LQ5H9L4 462 aa20.66■□□□□ 0.9
RPL28-205ENST00000558131 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
RPL28-205ENST00000558131 FAM84BQ96KN1 310 aaPredicted RBP20.66■□□□□ 0.9
RPL28-205ENST00000558131 PTPRCP08575 1304 aa20.65■□□□□ 0.9
RPL28-205ENST00000558131 CLRN2A0PK11 232 aa20.65■□□□□ 0.9
RPL28-205ENST00000558131 MKRN3Q13064 507 aaKnown RBP20.65■□□□□ 0.9
RPL28-205ENST00000558131 SSH1Q8WYL5 1049 aa20.65■□□□□ 0.9
RPL28-205ENST00000558131 LRRC24Q50LG9 513 aa20.64■□□□□ 0.89
RPL28-205ENST00000558131 ANGEL1Q9UNK9 670 aaKnown RBP20.64■□□□□ 0.89
RPL28-205ENST00000558131 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.89
RPL28-205ENST00000558131 E9PSI1 815 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 TBC1D8O95759 1140 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 GRIK5Q16478 980 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 SPRYD7Q5W111 196 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 ARMC9Q7Z3E5 817 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 CFHR5Q9BXR6 569 aa20.63■□□□□ 0.89
RPL28-205ENST00000558131 MROH5Q6ZUA9 1318 aa20.62■□□□□ 0.89
RPL28-205ENST00000558131 MLLT1Q03111 559 aaPredicted RBP20.62■□□□□ 0.89
RPL28-205ENST00000558131 MFSD14BQ5SR56 506 aa20.62■□□□□ 0.89
RPL28-205ENST00000558131 CTU1Q7Z7A3 348 aaKnown RBP20.62■□□□□ 0.89
RPL28-205ENST00000558131 ZNF296Q8WUU4 475 aaPredicted RBP20.62■□□□□ 0.89
RPL28-205ENST00000558131 CLMNQ96JQ2 1002 aa20.62■□□□□ 0.89
RPL28-205ENST00000558131 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
RPL28-205ENST00000558131 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
RPL28-205ENST00000558131 HIBADHP31937 336 aaKnown RBP20.61■□□□□ 0.89
RPL28-205ENST00000558131 SPDYE2Q495Y8 402 aa20.61■□□□□ 0.89
RPL28-205ENST00000558131 NOM1Q5C9Z4 860 aaKnown RBP20.61■□□□□ 0.89
RPL28-205ENST00000558131 NBPF12Q5TAG4 269 aaPredicted RBP20.61■□□□□ 0.89
RPL28-205ENST00000558131 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
RPL28-205ENST00000558131 CDAN1Q8IWY9 1227 aa20.61■□□□□ 0.89
RPL28-205ENST00000558131 KLHDC4Q8TBB5 520 aa20.61■□□□□ 0.89
RPL28-205ENST00000558131 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
RPL28-205ENST00000558131 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
RPL28-205ENST00000558131 SERPINA10Q9UK55 444 aa20.6■□□□□ 0.89
RPL28-205ENST00000558131 GJA5P36382 358 aa20.59■□□□□ 0.89
RPL28-205ENST00000558131 RFX5P48382 616 aaPredicted RBP20.59■□□□□ 0.89
RPL28-205ENST00000558131 RASA3Q14644 834 aa20.59■□□□□ 0.89
RPL28-205ENST00000558131 WNK4Q96J92 1243 aa20.59■□□□□ 0.89
RPL28-205ENST00000558131 TEPSINQ96N21 525 aa20.59■□□□□ 0.89
RPL28-205ENST00000558131 VEZTQ9HBM0 779 aa20.59■□□□□ 0.89
RPL28-205ENST00000558131 TTF2Q9UNY4 1162 aaKnown RBP20.59■□□□□ 0.89
RPL28-205ENST00000558131 MKI67P46013 3256 aaKnown RBP20.58■□□□□ 0.89
RPL28-205ENST00000558131 GPR25O00155 361 aa20.58■□□□□ 0.89
RPL28-205ENST00000558131 MYO1BO43795 1136 aa20.58■□□□□ 0.89
RPL28-205ENST00000558131 SREBF2Q12772 1141 aa20.58■□□□□ 0.89
RPL28-205ENST00000558131 ZNF70Q9UC06 446 aaPredicted RBP20.58■□□□□ 0.89
RPL28-205ENST00000558131 IQSEC3Q9UPP2 1182 aaPredicted RBP20.58■□□□□ 0.89
RPL28-205ENST00000558131 USP2O75604 605 aaPredicted RBP20.57■□□□□ 0.88
RPL28-205ENST00000558131 PDE8BO95263 885 aa20.57■□□□□ 0.88
RPL28-205ENST00000558131 ZBTB48P10074 688 aaPredicted RBP20.57■□□□□ 0.88
RPL28-205ENST00000558131 FGFR2P21802 821 aa20.57■□□□□ 0.88
RPL28-205ENST00000558131 ALDH1L2Q3SY69 923 aa20.57■□□□□ 0.88
RPL28-205ENST00000558131 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
RPL28-205ENST00000558131 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
RPL28-205ENST00000558131 IGF2BP3O00425 579 aaKnown RBP eCLIP20.56■□□□□ 0.88
RPL28-205ENST00000558131 CRKP46108 304 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms