RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GPR25O00155 361 aa17.97■□□□□ 0.47
SLIRP-210ENST00000557431 PLIN1O60240 522 aa17.97■□□□□ 0.47
SLIRP-210ENST00000557431 VAMP4O75379 141 aa17.97■□□□□ 0.47
SLIRP-210ENST00000557431 TM4SF4P48230 202 aa17.97■□□□□ 0.47
SLIRP-210ENST00000557431 REM2Q8IYK8 340 aaPredicted RBP17.97■□□□□ 0.47
SLIRP-210ENST00000557431 CLMNQ96JQ2 1002 aa17.97■□□□□ 0.47
SLIRP-210ENST00000557431 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
SLIRP-210ENST00000557431 ZSWIM8A7E2V4 1837 aa17.97■□□□□ 0.47
SLIRP-210ENST00000557431 DLGAP5Q15398 846 aa17.96■□□□□ 0.47
SLIRP-210ENST00000557431 IL16Q14005 1332 aa17.96■□□□□ 0.46
SLIRP-210ENST00000557431 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
SLIRP-210ENST00000557431 LDLRAD1Q5T700 205 aa17.95■□□□□ 0.46
SLIRP-210ENST00000557431 SPRYD7Q5W111 196 aa17.95■□□□□ 0.46
SLIRP-210ENST00000557431 DEFB129Q9H1M3 183 aa17.95■□□□□ 0.46
SLIRP-210ENST00000557431 VEZTQ9HBM0 779 aa17.95■□□□□ 0.46
SLIRP-210ENST00000557431 IFIT5Q13325 482 aaKnown RBP17.94■□□□□ 0.46
SLIRP-210ENST00000557431 BEND3Q5T5X7 828 aa17.94■□□□□ 0.46
SLIRP-210ENST00000557431 LMBR1LQ6UX01 489 aa17.94■□□□□ 0.46
SLIRP-210ENST00000557431 PRMT6Q96LA8 375 aaPredicted RBP17.94■□□□□ 0.46
SLIRP-210ENST00000557431 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
SLIRP-210ENST00000557431 COL1A1P02452 1464 aaPredicted RBP17.94■□□□□ 0.46
SLIRP-210ENST00000557431 AK9Q5TCS8 1911 aa17.94■□□□□ 0.46
SLIRP-210ENST00000557431 KIAA0100Q14667 2235 aaKnown RBP17.93■□□□□ 0.46
SLIRP-210ENST00000557431 SREBF2Q12772 1141 aa17.93■□□□□ 0.46
SLIRP-210ENST00000557431 NBPF12Q5TAG4 269 aaPredicted RBP17.93■□□□□ 0.46
SLIRP-210ENST00000557431 RBBP6Q7Z6E9 1792 aaKnown RBP17.92■□□□□ 0.46
SLIRP-210ENST00000557431 FKTNO75072 461 aa17.92■□□□□ 0.46
SLIRP-210ENST00000557431 WNK4Q96J92 1243 aa17.92■□□□□ 0.46
SLIRP-210ENST00000557431 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 IGF2BP3O00425 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLIRP-210ENST00000557431 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 GJA5P36382 358 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 RBM5P52756 815 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLIRP-210ENST00000557431 ZNF804AQ7Z570 1209 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 CDAN1Q8IWY9 1227 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 SLC10A4Q96EP9 437 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
SLIRP-210ENST00000557431 IL1R1P14778 569 aa17.9■□□□□ 0.46
SLIRP-210ENST00000557431 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
SLIRP-210ENST00000557431 FBXO46Q6PJ61 603 aaPredicted RBP17.9■□□□□ 0.46
SLIRP-210ENST00000557431 C15orf52Q6ZUT6 534 aaKnown RBP17.9■□□□□ 0.46
SLIRP-210ENST00000557431 MTMR14Q8NCE2 650 aa17.9■□□□□ 0.46
SLIRP-210ENST00000557431 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
SLIRP-210ENST00000557431 GRM8O00222 908 aa17.89■□□□□ 0.45
SLIRP-210ENST00000557431 GYG1P46976 350 aa17.89■□□□□ 0.45
SLIRP-210ENST00000557431 PKN2Q16513 984 aaKnown RBP17.89■□□□□ 0.45
SLIRP-210ENST00000557431 SLC4A10Q6U841 1118 aa17.89■□□□□ 0.45
SLIRP-210ENST00000557431 LDHAL6AQ6ZMR3 332 aa17.89■□□□□ 0.45
SLIRP-210ENST00000557431 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
SLIRP-210ENST00000557431 USP2O75604 605 aaPredicted RBP17.88■□□□□ 0.45
SLIRP-210ENST00000557431 RASA3Q14644 834 aa17.88■□□□□ 0.45
SLIRP-210ENST00000557431 GRIK5Q16478 980 aa17.88■□□□□ 0.45
SLIRP-210ENST00000557431 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
SLIRP-210ENST00000557431 CCDC57Q2TAC2 916 aa17.88■□□□□ 0.45
SLIRP-210ENST00000557431 SUCLG2Q96I99 432 aa17.88■□□□□ 0.45
SLIRP-210ENST00000557431 IQSEC3Q9UPP2 1182 aaPredicted RBP17.88■□□□□ 0.45
SLIRP-210ENST00000557431 TRIM17Q9Y577 477 aa17.88■□□□□ 0.45
SLIRP-210ENST00000557431 MANSC4A6NHS7 340 aaPredicted RBP17.87■□□□□ 0.45
SLIRP-210ENST00000557431 PPP1R12BO60237 982 aaPredicted RBP17.87■□□□□ 0.45
SLIRP-210ENST00000557431 MMP14P50281 582 aa17.87■□□□□ 0.45
SLIRP-210ENST00000557431 CAP1Q01518 475 aa17.87■□□□□ 0.45
SLIRP-210ENST00000557431 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
SLIRP-210ENST00000557431 CFHR5Q9BXR6 569 aa17.87■□□□□ 0.45
SLIRP-210ENST00000557431 TDRD3Q9H7E2 651 aaKnown RBP17.87■□□□□ 0.45
SLIRP-210ENST00000557431 C9orf78Q9NZ63 289 aaPredicted RBP17.87■□□□□ 0.45
SLIRP-210ENST00000557431 MYO1BO43795 1136 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 NOM1Q5C9Z4 860 aaKnown RBP17.86■□□□□ 0.45
SLIRP-210ENST00000557431 MFSD14BQ5SR56 506 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 OTOP1Q7RTM1 612 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 CD99L2Q8TCZ2 262 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
SLIRP-210ENST00000557431 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
SLIRP-210ENST00000557431 CRHR2Q13324 411 aa17.85■□□□□ 0.45
SLIRP-210ENST00000557431 PRPF38BQ5VTL8 546 aaKnown RBP17.85■□□□□ 0.45
SLIRP-210ENST00000557431 FAM84BQ96KN1 310 aaPredicted RBP17.85■□□□□ 0.45
SLIRP-210ENST00000557431 ZNF70Q9UC06 446 aaPredicted RBP17.85■□□□□ 0.45
SLIRP-210ENST00000557431 PPP2R3BQ9Y5P8 575 aa17.85■□□□□ 0.45
SLIRP-210ENST00000557431 FAM205AQ6ZU69 1335 aa17.84■□□□□ 0.45
SLIRP-210ENST00000557431 POTEFA5A3E0 1075 aa17.84■□□□□ 0.45
SLIRP-210ENST00000557431 TCP10L2B9ZVM9 353 aa17.84■□□□□ 0.45
SLIRP-210ENST00000557431 ZBTB48P10074 688 aaPredicted RBP17.84■□□□□ 0.45
SLIRP-210ENST00000557431 FKBP1AP62942 108 aaKnown RBP17.84■□□□□ 0.45
SLIRP-210ENST00000557431 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
SLIRP-210ENST00000557431 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
SLIRP-210ENST00000557431 TDRD7Q8NHU6 1098 aaKnown RBP17.84■□□□□ 0.45
SLIRP-210ENST00000557431 PTPN18Q99952 460 aa17.84■□□□□ 0.45
SLIRP-210ENST00000557431 ALDH1A1P00352 501 aa17.83■□□□□ 0.44
SLIRP-210ENST00000557431 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
SLIRP-210ENST00000557431 IREB2P48200 963 aaKnown RBP17.83■□□□□ 0.44
SLIRP-210ENST00000557431 CACNB3P54284 484 aa17.83■□□□□ 0.44
SLIRP-210ENST00000557431 CHAF1AQ13111 956 aaPredicted RBP17.83■□□□□ 0.44
SLIRP-210ENST00000557431 SUPT20HL1Q3ZLR7 823 aa17.83■□□□□ 0.44
SLIRP-210ENST00000557431 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
SLIRP-210ENST00000557431 TMEM39BQ9GZU3 492 aa17.83■□□□□ 0.44
SLIRP-210ENST00000557431 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
SLIRP-210ENST00000557431 LRRC24Q50LG9 513 aa17.82■□□□□ 0.44
SLIRP-210ENST00000557431 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
SLIRP-210ENST00000557431 KLHDC4Q8TBB5 520 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms