RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 FOXN1O15353 648 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 MYO1BO43795 1136 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 PDE8BO95263 885 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 FKBP1BP68106 108 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 NOGQ13253 232 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 DLGAP5Q15398 846 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 DLK2Q6UY11 383 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 CDCA5Q96FF9 252 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
XRCC3-216ENST00000556682 F8W031 263 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 EYA2O00167 538 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 GNAI3P08754 354 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 NF2P35240 595 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 GYG1P46976 350 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 APOBEC3FQ8IUX4 373 aaKnown RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-216ENST00000556682 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
XRCC3-216ENST00000556682 FAM205AQ6ZU69 1335 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 TRPM7Q96QT4 1865 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 AOC2O75106 756 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
XRCC3-216ENST00000556682 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
XRCC3-216ENST00000556682 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
XRCC3-216ENST00000556682 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-216ENST00000556682 CA12O43570 354 aa13.46□□□□□ -0.25
XRCC3-216ENST00000556682 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-216ENST00000556682 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-216ENST00000556682 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
XRCC3-216ENST00000556682 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
XRCC3-216ENST00000556682 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
XRCC3-216ENST00000556682 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-216ENST00000556682 JAG2Q9Y219 1238 aa13.46□□□□□ -0.25
XRCC3-216ENST00000556682 LRRFIP2Q9Y608 721 aaKnown RBP13.46□□□□□ -0.25
XRCC3-216ENST00000556682 SLC5A1P13866 664 aa13.45□□□□□ -0.26
XRCC3-216ENST00000556682 TTLL12Q14166 644 aaPredicted RBP13.45□□□□□ -0.26
XRCC3-216ENST00000556682 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
XRCC3-216ENST00000556682 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
XRCC3-216ENST00000556682 LPIN2Q92539 896 aa13.45□□□□□ -0.26
XRCC3-216ENST00000556682 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
XRCC3-216ENST00000556682 PSME4Q14997 1843 aa13.45□□□□□ -0.26
XRCC3-216ENST00000556682 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 BCAR3O75815 825 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 CIAO1O76071 339 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 TRIM27P14373 513 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 IL15P40933 162 aaPredicted RBP13.44□□□□□ -0.26
XRCC3-216ENST00000556682 LBX1P52954 281 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 MEIS3Q99687 375 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
XRCC3-216ENST00000556682 TTF2Q9UNY4 1162 aaKnown RBP13.44□□□□□ -0.26
XRCC3-216ENST00000556682 SCAF8Q9UPN6 1271 aaKnown RBP13.44□□□□□ -0.26
XRCC3-216ENST00000556682 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
XRCC3-216ENST00000556682 FGFR2P21802 821 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 BCAMP50895 628 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
XRCC3-216ENST00000556682 PRAMEF18Q5VWM3 479 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 ARMC9Q7Z3E5 817 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
XRCC3-216ENST00000556682 SIL1Q9H173 461 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 COPRSQ9NQ92 184 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 GNL3LQ9NVN8 582 aaKnown RBP13.43□□□□□ -0.26
XRCC3-216ENST00000556682 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 PPP2R3BQ9Y5P8 575 aa13.43□□□□□ -0.26
XRCC3-216ENST00000556682 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 SUPT20HL1Q3ZLR7 823 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
XRCC3-216ENST00000556682 DEFB129Q9H1M3 183 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 VEZTQ9HBM0 779 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 IQSEC3Q9UPP2 1182 aaPredicted RBP13.42□□□□□ -0.26
XRCC3-216ENST00000556682 SUGT1Q9Y2Z0 365 aa13.42□□□□□ -0.26
XRCC3-216ENST00000556682 CLRN2A0PK11 232 aa13.41□□□□□ -0.26
XRCC3-216ENST00000556682 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
XRCC3-216ENST00000556682 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
XRCC3-216ENST00000556682 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
XRCC3-216ENST00000556682 GNAI2P04899 355 aa13.41□□□□□ -0.26
XRCC3-216ENST00000556682 SLC10A3P09131 477 aa13.41□□□□□ -0.26
XRCC3-216ENST00000556682 HDLBPQ00341 1268 aaKnown RBP13.41□□□□□ -0.26
XRCC3-216ENST00000556682 KIF23Q02241 960 aaPredicted RBP13.41□□□□□ -0.26
XRCC3-216ENST00000556682 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
XRCC3-216ENST00000556682 WDR66Q8TBY9 1149 aa13.41□□□□□ -0.26
XRCC3-216ENST00000556682 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
XRCC3-216ENST00000556682 MAST3O60307 1309 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.26
XRCC3-216ENST00000556682 PCNTO95613 3336 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms