RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 DEFB129Q9H1M3 183 aa11.36□□□□□ -0.59
LINC00520-204ENST00000556417 HPS5Q9UPZ3 1129 aa11.36□□□□□ -0.59
LINC00520-204ENST00000556417 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
LINC00520-204ENST00000556417 PCDHAC2Q9Y5I4 1007 aa11.36□□□□□ -0.59
LINC00520-204ENST00000556417 ZNF646O15015 1829 aaPredicted RBP11.36□□□□□ -0.59
LINC00520-204ENST00000556417 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
LINC00520-204ENST00000556417 IL1R1P14778 569 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 SREBF2Q12772 1141 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 IFIT5Q13325 482 aaKnown RBP11.35□□□□□ -0.59
LINC00520-204ENST00000556417 DLGAP5Q15398 846 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 PKN2Q16513 984 aaKnown RBP11.35□□□□□ -0.59
LINC00520-204ENST00000556417 NOM1Q5C9Z4 860 aaKnown RBP11.35□□□□□ -0.59
LINC00520-204ENST00000556417 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 ARMC9Q7Z3E5 817 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 CFHR5Q9BXR6 569 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
LINC00520-204ENST00000556417 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
LINC00520-204ENST00000556417 MAP3K11Q16584 847 aa11.34□□□□□ -0.59
LINC00520-204ENST00000556417 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
LINC00520-204ENST00000556417 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
LINC00520-204ENST00000556417 PRMT6Q96LA8 375 aaPredicted RBP11.34□□□□□ -0.59
LINC00520-204ENST00000556417 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
LINC00520-204ENST00000556417 AOX1Q06278 1338 aa11.34□□□□□ -0.59
LINC00520-204ENST00000556417 F8W031 263 aaPredicted RBP11.33□□□□□ -0.6
LINC00520-204ENST00000556417 FKBP1AP62942 108 aaKnown RBP11.33□□□□□ -0.6
LINC00520-204ENST00000556417 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
LINC00520-204ENST00000556417 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
LINC00520-204ENST00000556417 CHMP3Q9Y3E7 222 aa11.33□□□□□ -0.6
LINC00520-204ENST00000556417 SPEF2Q9C093 1822 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 CLRN2A0PK11 232 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 GRM8O00222 908 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 ANP32CO43423 234 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 PLIN1O60240 522 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 INHBEP58166 350 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 CCDC57Q2TAC2 916 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 CFAP100Q494V2 611 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 SLC10A4Q96EP9 437 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 CLMNQ96JQ2 1002 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 PPP2R3BQ9Y5P8 575 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 MYH3P11055 1940 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 AKAP11Q9UKA4 1901 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 SSC5DA1L4H1 1573 aa11.32□□□□□ -0.6
LINC00520-204ENST00000556417 COL1A1P02452 1464 aaPredicted RBP11.32□□□□□ -0.6
LINC00520-204ENST00000556417 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
LINC00520-204ENST00000556417 PPP1R12BO60237 982 aaPredicted RBP11.31□□□□□ -0.6
LINC00520-204ENST00000556417 FKTNO75072 461 aa11.31□□□□□ -0.6
LINC00520-204ENST00000556417 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
LINC00520-204ENST00000556417 ALDH1A1P00352 501 aa11.31□□□□□ -0.6
LINC00520-204ENST00000556417 NBPF12Q5TAG4 269 aaPredicted RBP11.31□□□□□ -0.6
LINC00520-204ENST00000556417 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
LINC00520-204ENST00000556417 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
LINC00520-204ENST00000556417 CNNM1Q9NRU3 951 aa11.31□□□□□ -0.6
LINC00520-204ENST00000556417 UNCXA6NJT0 531 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 MYO1BO43795 1136 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
LINC00520-204ENST00000556417 RASA3Q14644 834 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
LINC00520-204ENST00000556417 KAZALD1Q96I82 304 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 WNK4Q96J92 1243 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 C9orf78Q9NZ63 289 aaPredicted RBP11.3□□□□□ -0.6
LINC00520-204ENST00000556417 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
LINC00520-204ENST00000556417 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
LINC00520-204ENST00000556417 IGF2BP3O00425 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00520-204ENST00000556417 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
LINC00520-204ENST00000556417 GJA5P36382 358 aa11.29□□□□□ -0.6
LINC00520-204ENST00000556417 GYG1P46976 350 aa11.29□□□□□ -0.6
LINC00520-204ENST00000556417 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00520-204ENST00000556417 UBE4AQ14139 1066 aa11.29□□□□□ -0.6
LINC00520-204ENST00000556417 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
LINC00520-204ENST00000556417 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
LINC00520-204ENST00000556417 PUS3Q9BZE2 481 aaKnown RBP11.29□□□□□ -0.6
LINC00520-204ENST00000556417 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
LINC00520-204ENST00000556417 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
LINC00520-204ENST00000556417 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
LINC00520-204ENST00000556417 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 MFSD14BQ5SR56 506 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 PTPN18Q99952 460 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
LINC00520-204ENST00000556417 RIPOR2Q9Y4F9 1068 aa11.28□□□□□ -0.6
LINC00520-204ENST00000556417 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
LINC00520-204ENST00000556417 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.61
LINC00520-204ENST00000556417 PRPF38BQ5VTL8 546 aaKnown RBP11.27□□□□□ -0.61
LINC00520-204ENST00000556417 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
LINC00520-204ENST00000556417 DZIP1LQ8IYY4 767 aaKnown RBP11.27□□□□□ -0.61
LINC00520-204ENST00000556417 ANKRD13AQ8IZ07 590 aa11.27□□□□□ -0.61
LINC00520-204ENST00000556417 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
LINC00520-204ENST00000556417 TEPSINQ96N21 525 aa11.27□□□□□ -0.61
LINC00520-204ENST00000556417 TDRD3Q9H7E2 651 aaKnown RBP11.27□□□□□ -0.61
LINC00520-204ENST00000556417 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms