RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 ZNF521Q96K83 1311 aa22.42■■□□□ 1.18
NPC2-208ENST00000556009 TM4SF4P48230 202 aa22.42■■□□□ 1.18
NPC2-208ENST00000556009 MLLT1Q03111 559 aaPredicted RBP22.42■■□□□ 1.18
NPC2-208ENST00000556009 ARMC9Q7Z3E5 817 aa22.42■■□□□ 1.18
NPC2-208ENST00000556009 TNRC18O15417 2968 aaPredicted RBP22.41■■□□□ 1.18
NPC2-208ENST00000556009 ARAP2Q8WZ64 1704 aa22.41■■□□□ 1.18
NPC2-208ENST00000556009 TAF7LQ5H9L4 462 aa22.41■■□□□ 1.18
NPC2-208ENST00000556009 LDLRAD1Q5T700 205 aa22.41■■□□□ 1.18
NPC2-208ENST00000556009 ZNF594Q96JF6 807 aaPredicted RBP22.41■■□□□ 1.18
NPC2-208ENST00000556009 CNNM1Q9NRU3 951 aa22.41■■□□□ 1.18
NPC2-208ENST00000556009 SLC4A10Q6U841 1118 aa22.4■■□□□ 1.18
NPC2-208ENST00000556009 DEFB129Q9H1M3 183 aa22.4■■□□□ 1.18
NPC2-208ENST00000556009 COL1A1P02452 1464 aaPredicted RBP22.4■■□□□ 1.18
NPC2-208ENST00000556009 UTYO14607 1347 aa22.39■■□□□ 1.18
NPC2-208ENST00000556009 PTPN12Q05209 780 aaKnown RBP22.39■■□□□ 1.17
NPC2-208ENST00000556009 UBE4AQ14139 1066 aa22.39■■□□□ 1.17
NPC2-208ENST00000556009 KAZALD1Q96I82 304 aa22.39■■□□□ 1.17
NPC2-208ENST00000556009 PPP2R3BQ9Y5P8 575 aa22.39■■□□□ 1.17
NPC2-208ENST00000556009 FAM205AQ6ZU69 1335 aa22.38■■□□□ 1.17
NPC2-208ENST00000556009 CTU1Q7Z7A3 348 aaKnown RBP22.38■■□□□ 1.17
NPC2-208ENST00000556009 SPDYE2BA6NHP3 402 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 PLIN1O60240 522 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 SPDYE6P0CI01 402 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 MAP3K11Q16584 847 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 CFAP100Q494V2 611 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 NOM1Q5C9Z4 860 aaKnown RBP22.37■■□□□ 1.17
NPC2-208ENST00000556009 SUCLG2Q96I99 432 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 OTOFQ9HC10 1997 aa22.37■■□□□ 1.17
NPC2-208ENST00000556009 UNCXA6NJT0 531 aa22.36■■□□□ 1.17
NPC2-208ENST00000556009 MYO1BO43795 1136 aa22.36■■□□□ 1.17
NPC2-208ENST00000556009 SREBF2Q12772 1141 aa22.36■■□□□ 1.17
NPC2-208ENST00000556009 TDRD7Q8NHU6 1098 aaKnown RBP22.36■■□□□ 1.17
NPC2-208ENST00000556009 PRMT6Q96LA8 375 aaPredicted RBP22.36■■□□□ 1.17
NPC2-208ENST00000556009 PCDHAC2Q9Y5I4 1007 aa22.36■■□□□ 1.17
NPC2-208ENST00000556009 SSC5DA1L4H1 1573 aa22.36■■□□□ 1.17
NPC2-208ENST00000556009 NBPF7P0C2Y1 421 aaPredicted RBP22.35■■□□□ 1.17
NPC2-208ENST00000556009 PRKG1Q13976 671 aa22.35■■□□□ 1.17
NPC2-208ENST00000556009 RABL6Q3YEC7 729 aaPredicted RBP22.35■■□□□ 1.17
NPC2-208ENST00000556009 MRPL50Q8N5N7 158 aaKnown RBP22.35■■□□□ 1.17
NPC2-208ENST00000556009 CFHR5Q9BXR6 569 aa22.35■■□□□ 1.17
NPC2-208ENST00000556009 ANGEL1Q9UNK9 670 aaKnown RBP22.35■■□□□ 1.17
NPC2-208ENST00000556009 FZD1Q9UP38 647 aa22.35■■□□□ 1.17
NPC2-208ENST00000556009 RIPOR2Q9Y4F9 1068 aa22.35■■□□□ 1.17
NPC2-208ENST00000556009 F8W031 263 aaPredicted RBP22.34■■□□□ 1.17
NPC2-208ENST00000556009 TBC1D8O95759 1140 aa22.34■■□□□ 1.17
NPC2-208ENST00000556009 HIBADHP31937 336 aaKnown RBP22.34■■□□□ 1.17
NPC2-208ENST00000556009 MKRN3Q13064 507 aaKnown RBP22.34■■□□□ 1.17
NPC2-208ENST00000556009 SUPT20HL1Q3ZLR7 823 aa22.34■■□□□ 1.17
NPC2-208ENST00000556009 SPRYD7Q5W111 196 aa22.34■■□□□ 1.17
NPC2-208ENST00000556009 FAM84BQ96KN1 310 aaPredicted RBP22.34■■□□□ 1.17
NPC2-208ENST00000556009 PUS3Q9BZE2 481 aaKnown RBP22.34■■□□□ 1.17
NPC2-208ENST00000556009 MROH5Q6ZUA9 1318 aa22.33■■□□□ 1.17
NPC2-208ENST00000556009 PPP1R12BO60237 982 aaPredicted RBP22.33■■□□□ 1.17
NPC2-208ENST00000556009 INHBEP58166 350 aa22.33■■□□□ 1.17
NPC2-208ENST00000556009 PKN2Q16513 984 aaKnown RBP22.33■■□□□ 1.17
NPC2-208ENST00000556009 PTPRCP08575 1304 aa22.32■■□□□ 1.16
NPC2-208ENST00000556009 AOX1Q06278 1338 aa22.32■■□□□ 1.16
NPC2-208ENST00000556009 ZNF296Q8WUU4 475 aaPredicted RBP22.32■■□□□ 1.16
NPC2-208ENST00000556009 SLC10A4Q96EP9 437 aa22.32■■□□□ 1.16
NPC2-208ENST00000556009 SERPINA10Q9UK55 444 aa22.32■■□□□ 1.16
NPC2-208ENST00000556009 JAG2Q9Y219 1238 aa22.32■■□□□ 1.16
NPC2-208ENST00000556009 GYG1P46976 350 aa22.31■■□□□ 1.16
NPC2-208ENST00000556009 BICC1Q9H694 974 aaKnown RBP22.31■■□□□ 1.16
NPC2-208ENST00000556009 PDE4DIPQ5VU43 2346 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 CLRN2A0PK11 232 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 MANSC4A6NHS7 340 aaPredicted RBP22.3■■□□□ 1.16
NPC2-208ENST00000556009 E9PSI1 815 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 GPR25O00155 361 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 ALDH1A1P00352 501 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 ZBTB48P10074 688 aaPredicted RBP22.3■■□□□ 1.16
NPC2-208ENST00000556009 MFSD14BQ5SR56 506 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 FBXO33Q7Z6M2 555 aa22.3■■□□□ 1.16
NPC2-208ENST00000556009 RBM5P52756 815 aaKnown RBP eCLIP22.29■■□□□ 1.16
NPC2-208ENST00000556009 SOX10P56693 466 aa22.29■■□□□ 1.16
NPC2-208ENST00000556009 RASA3Q14644 834 aa22.29■■□□□ 1.16
NPC2-208ENST00000556009 NBPF12Q5TAG4 269 aaPredicted RBP22.29■■□□□ 1.16
NPC2-208ENST00000556009 ANKRD44Q8N8A2 993 aa22.29■■□□□ 1.16
NPC2-208ENST00000556009 TTF2Q9UNY4 1162 aaKnown RBP22.29■■□□□ 1.16
NPC2-208ENST00000556009 USP2O75604 605 aaPredicted RBP22.28■■□□□ 1.16
NPC2-208ENST00000556009 SPDYE2Q495Y8 402 aa22.28■■□□□ 1.16
NPC2-208ENST00000556009 VEZTQ9HBM0 779 aa22.28■■□□□ 1.16
NPC2-208ENST00000556009 MYH13Q9UKX3 1938 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 SLFN5Q08AF3 891 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 TNFAIP1Q13829 316 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 SSH1Q8WYL5 1049 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 CLMNQ96JQ2 1002 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 USP44Q9H0E7 712 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 R3HDMLQ9H3Y0 253 aa22.27■■□□□ 1.16
NPC2-208ENST00000556009 ZNF70Q9UC06 446 aaPredicted RBP22.27■■□□□ 1.16
NPC2-208ENST00000556009 FKTNO75072 461 aa22.26■■□□□ 1.15
NPC2-208ENST00000556009 PDE8BO95263 885 aa22.26■■□□□ 1.15
NPC2-208ENST00000556009 IREB2P48200 963 aaKnown RBP22.26■■□□□ 1.15
NPC2-208ENST00000556009 LRRC24Q50LG9 513 aa22.26■■□□□ 1.15
NPC2-208ENST00000556009 DZIP1LQ8IYY4 767 aaKnown RBP22.26■■□□□ 1.15
NPC2-208ENST00000556009 VGLL2Q8N8G2 317 aa22.26■■□□□ 1.15
NPC2-208ENST00000556009 WNK4Q96J92 1243 aa22.26■■□□□ 1.15
NPC2-208ENST00000556009 HPS5Q9UPZ3 1129 aa22.26■■□□□ 1.15
NPC2-208ENST00000556009 HDLBPQ00341 1268 aaKnown RBP22.25■■□□□ 1.15
NPC2-208ENST00000556009 ALDH1L2Q3SY69 923 aa22.25■■□□□ 1.15
NPC2-208ENST00000556009 CAVIN4Q5BKX8 364 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms