RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 DSCC1Q9BVC3 393 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 EYA2O00167 538 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 TEX35Q5T0J7 233 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 NAA16Q6N069 864 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 PAG1Q9NWQ8 432 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 RCOR1Q9UKL0 485 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 CCDC73Q6ZRK6 1079 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 TFIP11Q9UBB9 837 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-210ENST00000555252 TPM4P67936 248 aa12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 TRIM28Q13263 835 aaKnown RBP12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 FAM173BQ6P4H8 233 aa12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 DHX40Q8IX18 779 aaKnown RBP12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 NEUROD6Q96NK8 337 aa12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 PHLPP2Q6ZVD8 1323 aa12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 TJP1Q07157 1748 aa12.43□□□□□ -0.42
MTHFD1-210ENST00000555252 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 ZMYM1Q5SVZ6 1142 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 DDX46Q7L014 1031 aaKnown RBP12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 ISCA1Q9BUE6 129 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 H3BQV1 296 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 A1BGP04217 495 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 CYP21A2P08686 494 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 Q6ZUG5 572 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 ZNF446Q9NWS9 450 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 AKAP2Q9Y2D5 859 aa12.42□□□□□ -0.42
MTHFD1-210ENST00000555252 GOLIM4O00461 696 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 MUM1L1Q5H9M0 696 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 TXLNBQ8N3L3 684 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 BRF1Q92994 677 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 FHOD1Q9Y613 1164 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 TAF6LQ9Y6J9 622 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 XIRP1Q702N8 1843 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 PFKFB2O60825 505 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 ZRANB2O95218 330 aaKnown RBP eCLIP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 CCAR1Q8IX12 1150 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 CEP126Q9P2H0 1117 aa12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 V9GYY5 206 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-210ENST00000555252 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 CCDC129Q6ZRS4 1044 aa12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 IPO4Q8TEX9 1081 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 PPP1R13BQ96KQ4 1090 aa12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 ZBTB3Q9H5J0 574 aa12.4□□□□□ -0.42
MTHFD1-210ENST00000555252 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 PCCAP05165 728 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 ADD1P35611 737 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 CLCN6P51797 869 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 EVA1CP58658 441 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 STK3Q13188 491 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 TMCO3Q6UWJ1 677 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 FCHSD1Q86WN1 690 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 AGXT2Q9BYV1 514 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 SLAIN2Q9P270 581 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 A0A1W2PQ27 194 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 A0A1W2PQ64 194 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 A0A1W2PQD8 194 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 SFPQP23246 707 aaKnown RBP eCLIP12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 TIMM10P62072 90 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
MTHFD1-210ENST00000555252 MYO1BO43795 1136 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 ETF1P62495 437 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 EXOSC10Q01780 885 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 GPS2Q13227 327 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms