RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
TMEM260-206ENST00000555046 H7C1D1 291 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
TMEM260-206ENST00000555046 SASH1O94885 1247 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 HACL1Q9UJ83 578 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
TMEM260-206ENST00000555046 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
TMEM260-206ENST00000555046 TRPM7Q96QT4 1865 aa13.08□□□□□ -0.32
TMEM260-206ENST00000555046 YDJCA8MPS7 323 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 IL1R1P14778 569 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 ATP2B3Q16720 1220 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 FBXO33Q7Z6M2 555 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 CAPNS2Q96L46 248 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 GPR101Q96P66 508 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-206ENST00000555046 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
TMEM260-206ENST00000555046 MYO3BQ8WXR4 1341 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 LAMB2P55268 1798 aa13.07□□□□□ -0.32
TMEM260-206ENST00000555046 PSMD14O00487 310 aa13.06□□□□□ -0.32
TMEM260-206ENST00000555046 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
TMEM260-206ENST00000555046 FGFR2P21802 821 aa13.06□□□□□ -0.32
TMEM260-206ENST00000555046 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
TMEM260-206ENST00000555046 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
TMEM260-206ENST00000555046 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
TMEM260-206ENST00000555046 GPR108Q9NPR9 543 aa13.06□□□□□ -0.32
TMEM260-206ENST00000555046 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 SNAP23O00161 211 aa13.05□□□□□ -0.32
TMEM260-206ENST00000555046 GMPSP49915 693 aaPredicted RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 TFCP2Q12800 502 aa13.05□□□□□ -0.32
TMEM260-206ENST00000555046 GORABQ5T7V8 394 aa13.05□□□□□ -0.32
TMEM260-206ENST00000555046 RSBN1LQ6PCB5 846 aaPredicted RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
TMEM260-206ENST00000555046 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
TMEM260-206ENST00000555046 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
TMEM260-206ENST00000555046 HDAC9Q9UKV0 1011 aa13.05□□□□□ -0.32
TMEM260-206ENST00000555046 SEMA3EO15041 775 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 ZBTB22O15209 634 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 EPHX2P34913 555 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 GYG1P46976 350 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 GTF2IP78347 998 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 CYP4F22Q6NT55 531 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 NEUROD6Q96NK8 337 aa13.04□□□□□ -0.32
TMEM260-206ENST00000555046 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
TMEM260-206ENST00000555046 ADARB2Q9NS39 739 aaKnown RBP13.04□□□□□ -0.32
TMEM260-206ENST00000555046 CEP290O15078 2479 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 A0A1B0GUL7 405 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 USP17L8P0C7I0 530 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 KLRK1P26718 216 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 DSG3P32926 999 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 BCAMP50895 628 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 TIMM10P62072 90 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 GRM1Q13255 1194 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
TMEM260-206ENST00000555046 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 KIF1BPQ96EK5 621 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
TMEM260-206ENST00000555046 MYH3P11055 1940 aa13.02□□□□□ -0.32
TMEM260-206ENST00000555046 CA12O43570 354 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-206ENST00000555046 EPS15P42566 896 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 ECE1P42892 770 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 SCNN1DP51172 638 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 DACT2Q5SW24 774 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-206ENST00000555046 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
TMEM260-206ENST00000555046 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-206ENST00000555046 DENND2AQ9ULE3 1009 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-206ENST00000555046 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
TMEM260-206ENST00000555046 AOC2O75106 756 aa13.01□□□□□ -0.33
TMEM260-206ENST00000555046 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
TMEM260-206ENST00000555046 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-206ENST00000555046 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
TMEM260-206ENST00000555046 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
TMEM260-206ENST00000555046 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
TMEM260-206ENST00000555046 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
TMEM260-206ENST00000555046 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-206ENST00000555046 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
TMEM260-206ENST00000555046 LRRC37AA6NMS7 1700 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 IGSF3O75054 1194 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 ZNF280AP59817 542 aaPredicted RBP13□□□□□ -0.33
TMEM260-206ENST00000555046 TNNI3KQ59H18 835 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 MFSD14BQ5SR56 506 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 CCDC102BQ68D86 513 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 RHPN1Q8TCX5 695 aa13□□□□□ -0.33
TMEM260-206ENST00000555046 GMLQ99445 158 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms