RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
ACTN1-213ENST00000554508 CDCA5Q96FF9 252 aa10.91□□□□□ -0.66
ACTN1-213ENST00000554508 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
ACTN1-213ENST00000554508 MYH13Q9UKX3 1938 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 EYA2O00167 538 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 FOXN1O15353 648 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 RFX5P48382 616 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-213ENST00000554508 FKBP1BP68106 108 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 PTPN12Q05209 780 aaKnown RBP10.9□□□□□ -0.66
ACTN1-213ENST00000554508 GRM1Q13255 1194 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 CAVIN4Q5BKX8 364 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-213ENST00000554508 RGMBQ6NW40 437 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 FBXO33Q7Z6M2 555 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 APOBEC3FQ8IUX4 373 aaKnown RBP10.9□□□□□ -0.66
ACTN1-213ENST00000554508 CERS5Q8N5B7 392 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 VGLL2Q8N8G2 317 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 KLHDC4Q8TBB5 520 aa10.9□□□□□ -0.66
ACTN1-213ENST00000554508 ZBED3Q96IU2 234 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-213ENST00000554508 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.67
ACTN1-213ENST00000554508 GNAI3P08754 354 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 GYG1P46976 350 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 NOGQ13253 232 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 CCDC102AQ96A19 550 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
ACTN1-213ENST00000554508 PAPPA2Q9BXP8 1791 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 MYO1BO43795 1136 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 BCAR3O75815 825 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 CIAO1O76071 339 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 IFIT1P09914 478 aaKnown RBP10.88□□□□□ -0.67
ACTN1-213ENST00000554508 FGFR2P21802 821 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 NF2P35240 595 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 PUM3Q15397 648 aaKnown RBP10.88□□□□□ -0.67
ACTN1-213ENST00000554508 CFAP100Q494V2 611 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 MFSD14BQ5SR56 506 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 FRAT1Q92837 279 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-213ENST00000554508 MEIS3Q99687 375 aa10.88□□□□□ -0.67
ACTN1-213ENST00000554508 LRRFIP2Q9Y608 721 aaKnown RBP10.88□□□□□ -0.67
ACTN1-213ENST00000554508 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 F8W031 263 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-213ENST00000554508 CA12O43570 354 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 AOC2O75106 756 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 FRAT2O75474 233 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-213ENST00000554508 SLC5A1P13866 664 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 TRIM27P14373 513 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-213ENST00000554508 ZNF157P51786 506 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-213ENST00000554508 ZKSCAN2Q63HK3 967 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 ATG9AQ7Z3C6 839 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 LPIN2Q92539 896 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
ACTN1-213ENST00000554508 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 CEP126Q9P2H0 1117 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 SERPINA10Q9UK55 444 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
ACTN1-213ENST00000554508 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-213ENST00000554508 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
ACTN1-213ENST00000554508 FAM155AB1AL88 458 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-213ENST00000554508 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
ACTN1-213ENST00000554508 BCAMP50895 628 aa10.86□□□□□ -0.67
ACTN1-213ENST00000554508 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
ACTN1-213ENST00000554508 TNS4Q8IZW8 715 aa10.86□□□□□ -0.67
ACTN1-213ENST00000554508 PRMT6Q96LA8 375 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-213ENST00000554508 TTF2Q9UNY4 1162 aaKnown RBP10.86□□□□□ -0.67
ACTN1-213ENST00000554508 PPP2R3BQ9Y5P8 575 aa10.86□□□□□ -0.67
ACTN1-213ENST00000554508 GNAI2P04899 355 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 SLC10A3P09131 477 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 HSPA8P11142 646 aaKnown RBP10.85□□□□□ -0.67
ACTN1-213ENST00000554508 LBX1P52954 281 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 HDLBPQ00341 1268 aaKnown RBP10.85□□□□□ -0.67
ACTN1-213ENST00000554508 MTX1Q13505 466 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-213ENST00000554508 MRIQ9BWK5 157 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 SIL1Q9H173 461 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 SCAF8Q9UPN6 1271 aaKnown RBP10.85□□□□□ -0.67
ACTN1-213ENST00000554508 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-213ENST00000554508 SUGT1Q9Y2Z0 365 aa10.85□□□□□ -0.67
ACTN1-213ENST00000554508 ZBTB22O15209 634 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 SRGAP3O43295 1099 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 CHAF1AQ13111 956 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-213ENST00000554508 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-213ENST00000554508 ATP2B3Q16720 1220 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 ARMC9Q7Z3E5 817 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 WDR66Q8TBY9 1149 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 GNL3LQ9NVN8 582 aaKnown RBP10.84□□□□□ -0.67
ACTN1-213ENST00000554508 PA2G4Q9UQ80 394 aaKnown RBP10.84□□□□□ -0.67
ACTN1-213ENST00000554508 PCDHAC2Q9Y5I4 1007 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 CASP8AP2Q9UKL3 1982 aa10.84□□□□□ -0.67
ACTN1-213ENST00000554508 UBE2Q2LH0YL09 131 aa10.83□□□□□ -0.68
ACTN1-213ENST00000554508 CRKP46108 304 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms