RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TDRD7Q8NHU6 1098 aaKnown RBP29.38■■■□□ 2.29
TDP1-205ENST00000553527 SCAF8Q9UPN6 1271 aaKnown RBP29.38■■■□□ 2.29
TDP1-205ENST00000553527 FRAT2O75474 233 aaPredicted RBP29.37■■■□□ 2.29
TDP1-205ENST00000553527 SASH1O94885 1247 aa29.37■■■□□ 2.29
TDP1-205ENST00000553527 RLBP1P12271 317 aa29.37■■■□□ 2.29
TDP1-205ENST00000553527 PUM3Q15397 648 aaKnown RBP29.37■■■□□ 2.29
TDP1-205ENST00000553527 PAXIP1Q6ZW49 1069 aaPredicted RBP29.37■■■□□ 2.29
TDP1-205ENST00000553527 ITPRIPQ8IWB1 547 aa29.37■■■□□ 2.29
TDP1-205ENST00000553527 SULF1Q8IWU6 871 aa29.37■■■□□ 2.29
TDP1-205ENST00000553527 IFIT1P09914 478 aaKnown RBP29.36■■■□□ 2.29
TDP1-205ENST00000553527 JMYQ8N9B5 988 aa29.36■■■□□ 2.29
TDP1-205ENST00000553527 CEP126Q9P2H0 1117 aa29.36■■■□□ 2.29
TDP1-205ENST00000553527 CNTNAP1P78357 1384 aa29.36■■■□□ 2.29
TDP1-205ENST00000553527 CIAO1O76071 339 aa29.35■■■□□ 2.29
TDP1-205ENST00000553527 BCAMP50895 628 aa29.35■■■□□ 2.29
TDP1-205ENST00000553527 FBXO33Q7Z6M2 555 aa29.35■■■□□ 2.29
TDP1-205ENST00000553527 VEGFBP49765 207 aa29.34■■■□□ 2.29
TDP1-205ENST00000553527 CHAF1AQ13111 956 aaPredicted RBP29.34■■■□□ 2.29
TDP1-205ENST00000553527 GRM1Q13255 1194 aa29.34■■■□□ 2.29
TDP1-205ENST00000553527 COPRSQ9NQ92 184 aa29.34■■■□□ 2.29
TDP1-205ENST00000553527 FBXO3Q9UK99 471 aa29.34■■■□□ 2.29
TDP1-205ENST00000553527 WNT10BO00744 389 aa29.33■■■□□ 2.29
TDP1-205ENST00000553527 SLC5A1P13866 664 aa29.33■■■□□ 2.29
TDP1-205ENST00000553527 FGFR2P21802 821 aa29.33■■■□□ 2.29
TDP1-205ENST00000553527 IL15P40933 162 aaPredicted RBP29.32■■■□□ 2.28
TDP1-205ENST00000553527 MFSD14BQ5SR56 506 aa29.32■■■□□ 2.28
TDP1-205ENST00000553527 PANK1Q8TE04 598 aa29.32■■■□□ 2.28
TDP1-205ENST00000553527 LPIN2Q92539 896 aa29.32■■■□□ 2.28
TDP1-205ENST00000553527 C1orf115Q9H7X2 142 aa29.32■■■□□ 2.28
TDP1-205ENST00000553527 FAM205AQ6ZU69 1335 aa29.31■■■□□ 2.28
TDP1-205ENST00000553527 RASSF10A6NK89 507 aa29.31■■■□□ 2.28
TDP1-205ENST00000553527 TLL2Q9Y6L7 1015 aa29.31■■■□□ 2.28
TDP1-205ENST00000553527 PNMA6EA0A0J9YXQ4 647 aa29.3■■■□□ 2.28
TDP1-205ENST00000553527 RBM5P52756 815 aaKnown RBP eCLIP29.3■■■□□ 2.28
TDP1-205ENST00000553527 FKBP1AP62942 108 aaKnown RBP29.3■■■□□ 2.28
TDP1-205ENST00000553527 MTX1Q13505 466 aa29.3■■■□□ 2.28
TDP1-205ENST00000553527 DLGAP5Q15398 846 aa29.3■■■□□ 2.28
TDP1-205ENST00000553527 ATP2B3Q16720 1220 aa29.3■■■□□ 2.28
TDP1-205ENST00000553527 MMP14P50281 582 aa29.29■■■□□ 2.28
TDP1-205ENST00000553527 PCDHAC2Q9Y5I4 1007 aa29.29■■■□□ 2.28
TDP1-205ENST00000553527 MYH13Q9UKX3 1938 aa29.29■■■□□ 2.28
TDP1-205ENST00000553527 ZBTB7BO15156 539 aaPredicted RBP29.28■■■□□ 2.28
TDP1-205ENST00000553527 CYP4F22Q6NT55 531 aa29.28■■■□□ 2.28
TDP1-205ENST00000553527 SAPCD2Q86UD0 394 aa29.28■■■□□ 2.28
TDP1-205ENST00000553527 CDCA5Q96FF9 252 aa29.28■■■□□ 2.28
TDP1-205ENST00000553527 CFAP100Q494V2 611 aa29.27■■■□□ 2.28
TDP1-205ENST00000553527 PRAMEF18Q5VWM3 479 aa29.27■■■□□ 2.28
TDP1-205ENST00000553527 TTF2Q9UNY4 1162 aaKnown RBP29.27■■■□□ 2.28
TDP1-205ENST00000553527 PITPNM2Q9BZ72 1349 aa29.26■■■□□ 2.27
TDP1-205ENST00000553527 WDR33Q9C0J8 1336 aaKnown RBP29.26■■■□□ 2.27
TDP1-205ENST00000553527 TIMM10P62072 90 aa29.25■■■□□ 2.27
TDP1-205ENST00000553527 TFCP2Q12800 502 aa29.25■■■□□ 2.27
TDP1-205ENST00000553527 C2orf69Q8N8R5 385 aa29.25■■■□□ 2.27
TDP1-205ENST00000553527 GBA2Q9HCG7 927 aaPredicted RBP29.25■■■□□ 2.27
TDP1-205ENST00000553527 G3BP1Q13283 466 aaKnown RBP eCLIP29.24■■■□□ 2.27
TDP1-205ENST00000553527 GRIK5Q16478 980 aa29.24■■■□□ 2.27
TDP1-205ENST00000553527 CAPNS2Q96L46 248 aa29.24■■■□□ 2.27
TDP1-205ENST00000553527 PRMT6Q96LA8 375 aaPredicted RBP29.24■■■□□ 2.27
TDP1-205ENST00000553527 HSPA1AP0DMV8 641 aaKnown RBP29.23■■■□□ 2.27
TDP1-205ENST00000553527 HSPA1BP0DMV9 641 aaKnown RBP29.23■■■□□ 2.27
TDP1-205ENST00000553527 MS4A1P11836 297 aa29.23■■■□□ 2.27
TDP1-205ENST00000553527 ADORA1P30542 326 aa29.23■■■□□ 2.27
TDP1-205ENST00000553527 HUNKP57058 714 aa29.23■■■□□ 2.27
TDP1-205ENST00000553527 ATP8B2P98198 1209 aa29.23■■■□□ 2.27
TDP1-205ENST00000553527 ZBED3Q96IU2 234 aaPredicted RBP29.23■■■□□ 2.27
TDP1-205ENST00000553527 CLRN2A0PK11 232 aa29.22■■■□□ 2.27
TDP1-205ENST00000553527 ECE1P42892 770 aa29.22■■■□□ 2.27
TDP1-205ENST00000553527 ECM29Q5VYK3 1845 aa29.22■■■□□ 2.27
TDP1-205ENST00000553527 ARAP2Q8WZ64 1704 aa29.21■■■□□ 2.27
TDP1-205ENST00000553527 MYO1BO43795 1136 aa29.21■■■□□ 2.27
TDP1-205ENST00000553527 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.21■■■□□ 2.27
TDP1-205ENST00000553527 MTMR14Q8NCE2 650 aa29.21■■■□□ 2.27
TDP1-205ENST00000553527 TBC1D22AQ8WUA7 517 aa29.21■■■□□ 2.27
TDP1-205ENST00000553527 NEUROD6Q96NK8 337 aa29.21■■■□□ 2.27
TDP1-205ENST00000553527 GNL3LQ9NVN8 582 aaKnown RBP29.21■■■□□ 2.27
TDP1-205ENST00000553527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.21■■■□□ 2.27
TDP1-205ENST00000553527 SPDYE2BA6NHP3 402 aa29.2■■■□□ 2.26
TDP1-205ENST00000553527 SPDYE6P0CI01 402 aa29.2■■■□□ 2.26
TDP1-205ENST00000553527 APOBEC3FQ8IUX4 373 aaKnown RBP29.2■■■□□ 2.26
TDP1-205ENST00000553527 AKAP2Q9Y2D5 859 aa29.2■■■□□ 2.26
TDP1-205ENST00000553527 COG6Q9Y2V7 657 aa29.2■■■□□ 2.26
TDP1-205ENST00000553527 A0A1B0GUL7 405 aa29.19■■■□□ 2.26
TDP1-205ENST00000553527 PHKA1P46020 1223 aa29.19■■■□□ 2.26
TDP1-205ENST00000553527 VEZTQ9HBM0 779 aa29.19■■■□□ 2.26
TDP1-205ENST00000553527 AOX1Q06278 1338 aa29.19■■■□□ 2.26
TDP1-205ENST00000553527 AOC2O75106 756 aa29.18■■■□□ 2.26
TDP1-205ENST00000553527 CRKP46108 304 aa29.18■■■□□ 2.26
TDP1-205ENST00000553527 OS9Q13438 667 aaPredicted RBP29.18■■■□□ 2.26
TDP1-205ENST00000553527 SERPINA10Q9UK55 444 aa29.18■■■□□ 2.26
TDP1-205ENST00000553527 SURF6O75683 361 aaKnown RBP29.17■■■□□ 2.26
TDP1-205ENST00000553527 TTLL12Q14166 644 aaPredicted RBP29.17■■■□□ 2.26
TDP1-205ENST00000553527 POLA2Q14181 598 aa29.17■■■□□ 2.26
TDP1-205ENST00000553527 SSH3Q8TE77 659 aa29.17■■■□□ 2.26
TDP1-205ENST00000553527 XAGE2Q96GT9 111 aa29.17■■■□□ 2.26
TDP1-205ENST00000553527 CCDC102BQ68D86 513 aa29.16■■■□□ 2.26
TDP1-205ENST00000553527 MOB2Q70IA6 237 aa29.16■■■□□ 2.26
TDP1-205ENST00000553527 WDR66Q8TBY9 1149 aa29.16■■■□□ 2.26
TDP1-205ENST00000553527 HHIPL1Q96JK4 782 aa29.16■■■□□ 2.26
TDP1-205ENST00000553527 TDRD3Q9H7E2 651 aaKnown RBP29.16■■■□□ 2.26
TDP1-205ENST00000553527 MVPQ14764 893 aaKnown RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms