RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 ZC3H12CQ9C0D7 883 aaKnown RBP11.93□□□□□ -0.5
TMEM260-204ENST00000553335 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
TMEM260-204ENST00000553335 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
TMEM260-204ENST00000553335 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM260-204ENST00000553335 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
TMEM260-204ENST00000553335 C15orf52Q6ZUT6 534 aaKnown RBP11.92□□□□□ -0.5
TMEM260-204ENST00000553335 VPS33BQ9H267 617 aa11.92□□□□□ -0.5
TMEM260-204ENST00000553335 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
TMEM260-204ENST00000553335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-204ENST00000553335 SNED1Q8TER0 1413 aa11.92□□□□□ -0.5
TMEM260-204ENST00000553335 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
TMEM260-204ENST00000553335 G3V3G9 751 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 SNAP23O00161 211 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 SLC51AQ86UW1 340 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 VPS37DQ86XT2 251 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-204ENST00000553335 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 GNL3LQ9NVN8 582 aaKnown RBP11.91□□□□□ -0.5
TMEM260-204ENST00000553335 SBF1O95248 1867 aa11.91□□□□□ -0.5
TMEM260-204ENST00000553335 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 LTBP3Q9NS15 1303 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 ERC2O15083 957 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 MX1P20591 662 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
TMEM260-204ENST00000553335 ARHGAP27Q6ZUM4 889 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
TMEM260-204ENST00000553335 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
TMEM260-204ENST00000553335 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-204ENST00000553335 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 ADORA1P30542 326 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 GYG1P46976 350 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-204ENST00000553335 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-204ENST00000553335 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
TMEM260-204ENST00000553335 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
TMEM260-204ENST00000553335 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 PSME4Q14997 1843 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 NFKBIEO00221 500 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 FRAT2O75474 233 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-204ENST00000553335 YBX3P16989 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM260-204ENST00000553335 PDE4AP27815 886 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
TMEM260-204ENST00000553335 BCAMP50895 628 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 PDE1AP54750 535 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 TXNRD3Q86VQ6 643 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 LARGE2Q8N3Y3 721 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM260-204ENST00000553335 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 ZNF512BQ96KM6 892 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-204ENST00000553335 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
TMEM260-204ENST00000553335 AOX1Q06278 1338 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 SEMA3EO15041 775 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 ATP5JP18859 108 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 KLRK1P26718 216 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-204ENST00000553335 PHKA1P46020 1223 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 RGS3P49796 1198 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 AOC3Q16853 763 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-204ENST00000553335 ZNF277Q9NRM2 450 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-204ENST00000553335 DENND2AQ9ULE3 1009 aa11.87□□□□□ -0.51
TMEM260-204ENST00000553335 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
TMEM260-204ENST00000553335 IL1R1P14778 569 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 RASSF7Q02833 373 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 E2F4Q16254 413 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 UTRNP46939 3433 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 MYH7P12883 1935 aa11.86□□□□□ -0.51
TMEM260-204ENST00000553335 ECE2O60344 883 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 LMNB1P20700 586 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 DOK7Q18PE1 504 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
TMEM260-204ENST00000553335 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 BOLA2Q9H3K6 86 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
TMEM260-204ENST00000553335 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
TMEM260-204ENST00000553335 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
TMEM260-204ENST00000553335 MCAMP43121 646 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms