RNA–Protein interactions for RNA: ENST00000552211.5

NCKAP1L-208, Transcript of NCK associated protein 1 like, humanhuman

TSL 5

Gene NCKAP1L, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-208ENST00000552211 SZT2Q5T011 3432 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 DDX58O95786 925 aaKnown RBP13□□□□□ -0.33
NCKAP1L-208ENST00000552211 CRHR2Q13324 411 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
NCKAP1L-208ENST00000552211 CFAP100Q494V2 611 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 OGFOD1Q8N543 542 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
NCKAP1L-208ENST00000552211 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 CEP290O15078 2479 aa13□□□□□ -0.33
NCKAP1L-208ENST00000552211 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 IGHMBP2P38935 993 aaKnown RBP12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 FLIIQ13045 1269 aa12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 APOBEC3FQ8IUX4 373 aaKnown RBP12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 CFHR5Q9BXR6 569 aa12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
NCKAP1L-208ENST00000552211 MYO3BQ8WXR4 1341 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 PLIN1O60240 522 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 PKN2Q16513 984 aaKnown RBP12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 PUS3Q9BZE2 481 aaKnown RBP12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 MYH13Q9UKX3 1938 aa12.98□□□□□ -0.33
NCKAP1L-208ENST00000552211 FANCIQ9NVI1 1328 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 TRIOBPQ9H2D6 2365 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 NF2P35240 595 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 SREBF2Q12772 1141 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 NOM1Q5C9Z4 860 aaKnown RBP12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 DNAAF4Q8WXU2 420 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
NCKAP1L-208ENST00000552211 HSP90B1P14625 803 aaKnown RBP12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 IL1R1P14778 569 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 GYG1P46976 350 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 KCNJ4P48050 445 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 CACNB3P54284 484 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 RASA3Q14644 834 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 HABP4Q5JVS0 413 aaKnown RBP12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 TEPSINQ96N21 525 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
NCKAP1L-208ENST00000552211 VAMP4O75379 141 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 FKBP5Q13451 457 aaPredicted RBP12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 ANKRD2Q9GZV1 360 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 TDRD3Q9H7E2 651 aaKnown RBP12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 PTPN22Q9Y2R2 807 aa12.95□□□□□ -0.34
NCKAP1L-208ENST00000552211 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 MANSC4A6NHS7 340 aaPredicted RBP12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 EXOSC9Q06265 439 aaKnown RBP12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 C15orf52Q6ZUT6 534 aaKnown RBP12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 OPTNQ96CV9 577 aa12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 ZNF70Q9UC06 446 aaPredicted RBP12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
NCKAP1L-208ENST00000552211 MGAMO43451 1857 aa12.93□□□□□ -0.34
NCKAP1L-208ENST00000552211 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
NCKAP1L-208ENST00000552211 CTGFP29279 349 aa12.93□□□□□ -0.34
NCKAP1L-208ENST00000552211 RBM5P52756 815 aaKnown RBP eCLIP12.93□□□□□ -0.34
NCKAP1L-208ENST00000552211 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
NCKAP1L-208ENST00000552211 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
NCKAP1L-208ENST00000552211 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 VGLL4Q14135 290 aa12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 DOCK3Q8IZD9 2030 aa12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
NCKAP1L-208ENST00000552211 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 ARMC5Q96C12 935 aa12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
NCKAP1L-208ENST00000552211 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
NCKAP1L-208ENST00000552211 PTPRFP10586 1907 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms