RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, human

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN1-209	ENST00000551424	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.99	■■■□□ 2.23
CNTN1-209	ENST00000551424	TBC1D8	O95759	1140 aa		28.99	■■■□□ 2.23
CNTN1-209	ENST00000551424	CTU1	Q7Z7A3	348 aa	Known RBP	28.99	■■■□□ 2.23
CNTN1-209	ENST00000551424	CNNM1	Q9NRU3	951 aa		28.99	■■■□□ 2.23
CNTN1-209	ENST00000551424	PTPN12	Q05209	780 aa	Known RBP	28.98	■■■□□ 2.23
CNTN1-209	ENST00000551424	LDHAL6A	Q6ZMR3	332 aa		28.98	■■■□□ 2.23
CNTN1-209	ENST00000551424	C15orf52	Q6ZUT6	534 aa	Known RBP	28.98	■■■□□ 2.23
CNTN1-209	ENST00000551424	ANGEL1	Q9UNK9	670 aa	Known RBP	28.98	■■■□□ 2.23
CNTN1-209	ENST00000551424	PCDHAC2	Q9Y5I4	1007 aa		28.98	■■■□□ 2.23
CNTN1-209	ENST00000551424	FZD1	Q9UP38	647 aa		28.97	■■■□□ 2.23
CNTN1-209	ENST00000551424	SOX10	P56693	466 aa		28.96	■■■□□ 2.23
CNTN1-209	ENST00000551424	ECM29	Q5VYK3	1845 aa		28.96	■■■□□ 2.23
CNTN1-209	ENST00000551424	IL1R1	P14778	569 aa		28.95	■■■□□ 2.22
CNTN1-209	ENST00000551424	ZEB1	P37275	1124 aa	Predicted RBP	28.95	■■■□□ 2.22
CNTN1-209	ENST00000551424	DEFB129	Q9H1M3	183 aa		28.95	■■■□□ 2.22
CNTN1-209	ENST00000551424	COL1A1	P02452	1464 aa	Predicted RBP	28.94	■■■□□ 2.22
CNTN1-209	ENST00000551424	CLRN2	A0PK11	232 aa		28.94	■■■□□ 2.22
CNTN1-209	ENST00000551424	CFAP100	Q494V2	611 aa		28.94	■■■□□ 2.22
CNTN1-209	ENST00000551424	SRCIN1	Q9C0H9	1055 aa		28.94	■■■□□ 2.22
CNTN1-209	ENST00000551424	ALDH1L1	O75891	902 aa		28.93	■■■□□ 2.22
CNTN1-209	ENST00000551424	ZNF296	Q8WUU4	475 aa	Predicted RBP	28.93	■■■□□ 2.22
CNTN1-209	ENST00000551424	VEZT	Q9HBM0	779 aa		28.93	■■■□□ 2.22
CNTN1-209	ENST00000551424	MYO1B	O43795	1136 aa		28.92	■■■□□ 2.22
CNTN1-209	ENST00000551424	TM4SF4	P48230	202 aa		28.92	■■■□□ 2.22
CNTN1-209	ENST00000551424	RBM5	P52756	815 aa	Known RBP eCLIP	28.92	■■■□□ 2.22
CNTN1-209	ENST00000551424	SREBF2	Q12772	1141 aa		28.92	■■■□□ 2.22
CNTN1-209	ENST00000551424	MTMR14	Q8NCE2	650 aa		28.92	■■■□□ 2.22
CNTN1-209	ENST00000551424	SUCLG2	Q96I99	432 aa		28.92	■■■□□ 2.22
CNTN1-209	ENST00000551424	LDLRAD1	Q5T700	205 aa		28.91	■■■□□ 2.22
CNTN1-209	ENST00000551424	SSC5D	A1L4H1	1573 aa		28.9	■■■□□ 2.22
CNTN1-209	ENST00000551424	SPRYD7	Q5W111	196 aa		28.9	■■■□□ 2.22
CNTN1-209	ENST00000551424	PRMT6	Q96LA8	375 aa	Predicted RBP	28.9	■■■□□ 2.22
CNTN1-209	ENST00000551424	AOX1	Q06278	1338 aa		28.9	■■■□□ 2.22
CNTN1-209	ENST00000551424	SPDYE2B	A6NHP3	402 aa		28.89	■■■□□ 2.22
CNTN1-209	ENST00000551424	SPDYE6	P0CI01	402 aa		28.89	■■■□□ 2.22
CNTN1-209	ENST00000551424	FKBP1A	P62942	108 aa	Known RBP	28.89	■■■□□ 2.22
CNTN1-209	ENST00000551424	PUS3	Q9BZE2	481 aa	Known RBP	28.89	■■■□□ 2.22
CNTN1-209	ENST00000551424	GPR25	O00155	361 aa		28.88	■■■□□ 2.21
CNTN1-209	ENST00000551424	GYG1	P46976	350 aa		28.88	■■■□□ 2.21
CNTN1-209	ENST00000551424	SLC10A4	Q96EP9	437 aa		28.88	■■■□□ 2.21
CNTN1-209	ENST00000551424	PPP2R3B	Q9Y5P8	575 aa		28.88	■■■□□ 2.21
CNTN1-209	ENST00000551424	PPP1R12B	O60237	982 aa	Predicted RBP	28.87	■■■□□ 2.21
CNTN1-209	ENST00000551424	CLMN	Q96JQ2	1002 aa		28.87	■■■□□ 2.21
CNTN1-209	ENST00000551424	HPS5	Q9UPZ3	1129 aa		28.87	■■■□□ 2.21
CNTN1-209	ENST00000551424	UBE4A	Q14139	1066 aa		28.86	■■■□□ 2.21
CNTN1-209	ENST00000551424	KAZALD1	Q96I82	304 aa		28.86	■■■□□ 2.21
CNTN1-209	ENST00000551424	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	HIBADH	P31937	336 aa	Known RBP	28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	SUPT20HL1	Q3ZLR7	823 aa		28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	MFSD14B	Q5SR56	506 aa		28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	NBPF12	Q5TAG4	269 aa	Predicted RBP	28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	R3HDML	Q9H3Y0	253 aa		28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	FAM205A	Q6ZU69	1335 aa		28.85	■■■□□ 2.21
CNTN1-209	ENST00000551424	TDRD7	Q8NHU6	1098 aa	Known RBP	28.84	■■■□□ 2.21
CNTN1-209	ENST00000551424	TTF2	Q9UNY4	1162 aa	Known RBP	28.84	■■■□□ 2.21
CNTN1-209	ENST00000551424	PKN2	Q16513	984 aa	Known RBP	28.83	■■■□□ 2.21
CNTN1-209	ENST00000551424	MAP3K11	Q16584	847 aa		28.83	■■■□□ 2.21
CNTN1-209	ENST00000551424	WNK4	Q96J92	1243 aa		28.83	■■■□□ 2.21
CNTN1-209	ENST00000551424	BICC1	Q9H694	974 aa	Known RBP	28.83	■■■□□ 2.21
CNTN1-209	ENST00000551424	ARAP2	Q8WZ64	1704 aa		28.83	■■■□□ 2.21
CNTN1-209	ENST00000551424	MANSC4	A6NHS7	340 aa	Predicted RBP	28.82	■■■□□ 2.2
CNTN1-209	ENST00000551424	FKTN	O75072	461 aa		28.82	■■■□□ 2.2
CNTN1-209	ENST00000551424	RASA3	Q14644	834 aa		28.82	■■■□□ 2.2
CNTN1-209	ENST00000551424	FAM84B	Q96KN1	310 aa	Predicted RBP	28.82	■■■□□ 2.2
CNTN1-209	ENST00000551424	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.81	■■■□□ 2.2
CNTN1-209	ENST00000551424	MROH5	Q6ZUA9	1318 aa		28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	ZNF521	Q96K83	1311 aa		28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	IREB2	P48200	963 aa	Known RBP	28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	NOM1	Q5C9Z4	860 aa	Known RBP	28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	MRPL50	Q8N5N7	158 aa	Known RBP	28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	TDRD3	Q9H7E2	651 aa	Known RBP	28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	ZNF70	Q9UC06	446 aa	Predicted RBP	28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	RIPOR2	Q9Y4F9	1068 aa		28.8	■■■□□ 2.2
CNTN1-209	ENST00000551424	UTY	O14607	1347 aa		28.79	■■■□□ 2.2
CNTN1-209	ENST00000551424	ALDH1A1	P00352	501 aa		28.79	■■■□□ 2.2
CNTN1-209	ENST00000551424	ZBTB48	P10074	688 aa	Predicted RBP	28.79	■■■□□ 2.2
CNTN1-209	ENST00000551424	CHAF1A	Q13111	956 aa	Predicted RBP	28.79	■■■□□ 2.2
CNTN1-209	ENST00000551424	VPS37D	Q86XT2	251 aa		28.79	■■■□□ 2.2
CNTN1-209	ENST00000551424	IFNL1	Q8IU54	200 aa		28.79	■■■□□ 2.2
CNTN1-209	ENST00000551424	SPDYE2	Q495Y8	402 aa		28.78	■■■□□ 2.2
CNTN1-209	ENST00000551424	LRRC24	Q50LG9	513 aa		28.78	■■■□□ 2.2
CNTN1-209	ENST00000551424	METTL24	Q5JXM2	366 aa		28.78	■■■□□ 2.2
CNTN1-209	ENST00000551424	CFHR5	Q9BXR6	569 aa		28.78	■■■□□ 2.2
CNTN1-209	ENST00000551424	SERPINA10	Q9UK55	444 aa		28.78	■■■□□ 2.2
CNTN1-209	ENST00000551424	USP2	O75604	605 aa	Predicted RBP	28.77	■■■□□ 2.2
CNTN1-209	ENST00000551424	TNFAIP1	Q13829	316 aa		28.77	■■■□□ 2.2
CNTN1-209	ENST00000551424	ANKRD44	Q8N8A2	993 aa		28.77	■■■□□ 2.2
CNTN1-209	ENST00000551424	OTOF	Q9HC10	1997 aa		28.77	■■■□□ 2.2
CNTN1-209	ENST00000551424	IGF2BP3	O00425	579 aa	Known RBP eCLIP	28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	FRAT2	O75474	233 aa	Predicted RBP	28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	CRK	P46108	304 aa		28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	INHBE	P58166	350 aa		28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	RABL6	Q3YEC7	729 aa	Predicted RBP	28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	FBXO46	Q6PJ61	603 aa	Predicted RBP	28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	DZIP1L	Q8IYY4	767 aa	Known RBP	28.76	■■■□□ 2.19
CNTN1-209	ENST00000551424	PDE4DIP	Q5VU43	2346 aa		28.75	■■■□□ 2.19
CNTN1-209	ENST00000551424	TCP10L2	B9ZVM9	353 aa		28.75	■■■□□ 2.19
CNTN1-209	ENST00000551424	GRIK5	Q16478	980 aa		28.75	■■■□□ 2.19
CNTN1-209	ENST00000551424	ANKRD13A	Q8IZ07	590 aa		28.75	■■■□□ 2.19
CNTN1-209	ENST00000551424	GJA5	P36382	358 aa		28.74	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms