RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 MMP14P50281 582 aa18.37■□□□□ 0.53
LINC00661-203ENST00000549131 COL13A1Q5TAT6 717 aaPredicted RBP18.37■□□□□ 0.53
LINC00661-203ENST00000549131 VPS37DQ86XT2 251 aa18.37■□□□□ 0.53
LINC00661-203ENST00000549131 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
LINC00661-203ENST00000549131 C2orf69Q8N8R5 385 aa18.37■□□□□ 0.53
LINC00661-203ENST00000549131 MEIS3Q99687 375 aa18.37■□□□□ 0.53
LINC00661-203ENST00000549131 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
LINC00661-203ENST00000549131 AOC2O75106 756 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 PDE8BO95263 885 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 TRIM27P14373 513 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 RFX5P48382 616 aaPredicted RBP18.36■□□□□ 0.53
LINC00661-203ENST00000549131 MAP2K1Q02750 393 aaPredicted RBP18.36■□□□□ 0.53
LINC00661-203ENST00000549131 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 SIL1Q9H173 461 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 HDAC5Q9UQL6 1122 aa18.36■□□□□ 0.53
LINC00661-203ENST00000549131 EYA2O00167 538 aa18.35■□□□□ 0.53
LINC00661-203ENST00000549131 FKBP1AP62942 108 aaKnown RBP18.35■□□□□ 0.53
LINC00661-203ENST00000549131 PUM3Q15397 648 aaKnown RBP18.35■□□□□ 0.53
LINC00661-203ENST00000549131 INTS3Q68E01 1043 aaKnown RBP18.35■□□□□ 0.53
LINC00661-203ENST00000549131 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
LINC00661-203ENST00000549131 FAM84BQ96KN1 310 aaPredicted RBP18.35■□□□□ 0.53
LINC00661-203ENST00000549131 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
LINC00661-203ENST00000549131 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
LINC00661-203ENST00000549131 FAM205AQ6ZU69 1335 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 PTPN12Q05209 780 aaKnown RBP18.34■□□□□ 0.53
LINC00661-203ENST00000549131 DLGAP5Q15398 846 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 CAVIN4Q5BKX8 364 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 MFSD14BQ5SR56 506 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 APOBEC3FQ8IUX4 373 aaKnown RBP18.34■□□□□ 0.53
LINC00661-203ENST00000549131 TDRD7Q8NHU6 1098 aaKnown RBP18.34■□□□□ 0.53
LINC00661-203ENST00000549131 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 BEGAINQ9BUH8 593 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 TNNQ9UQP3 1299 aa18.34■□□□□ 0.53
LINC00661-203ENST00000549131 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.53
LINC00661-203ENST00000549131 FRAT2O75474 233 aaPredicted RBP18.33■□□□□ 0.52
LINC00661-203ENST00000549131 GNAI3P08754 354 aa18.33■□□□□ 0.52
LINC00661-203ENST00000549131 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
LINC00661-203ENST00000549131 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
LINC00661-203ENST00000549131 IFIT1P09914 478 aaKnown RBP18.32■□□□□ 0.52
LINC00661-203ENST00000549131 MAP2K2P36507 400 aa18.32■□□□□ 0.52
LINC00661-203ENST00000549131 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
LINC00661-203ENST00000549131 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
LINC00661-203ENST00000549131 CFAP100Q494V2 611 aa18.32■□□□□ 0.52
LINC00661-203ENST00000549131 PRAMEF18Q5VWM3 479 aa18.32■□□□□ 0.52
LINC00661-203ENST00000549131 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
LINC00661-203ENST00000549131 ATG9AQ7Z3C6 839 aa18.32■□□□□ 0.52
LINC00661-203ENST00000549131 ZBED3Q96IU2 234 aaPredicted RBP18.32■□□□□ 0.52
LINC00661-203ENST00000549131 MYO1BO43795 1136 aa18.31■□□□□ 0.52
LINC00661-203ENST00000549131 SLC5A1P13866 664 aa18.31■□□□□ 0.52
LINC00661-203ENST00000549131 ZNF157P51786 506 aaPredicted RBP18.31■□□□□ 0.52
LINC00661-203ENST00000549131 NOGQ13253 232 aa18.31■□□□□ 0.52
LINC00661-203ENST00000549131 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
LINC00661-203ENST00000549131 FBXO33Q7Z6M2 555 aa18.31■□□□□ 0.52
LINC00661-203ENST00000549131 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
LINC00661-203ENST00000549131 PCDHAC2Q9Y5I4 1007 aa18.31■□□□□ 0.52
LINC00661-203ENST00000549131 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 CIAO1O76071 339 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 FGFR2P21802 821 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 NF2P35240 595 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 BCAMP50895 628 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 FKBP1BP68106 108 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 TTLL12Q14166 644 aaPredicted RBP18.3■□□□□ 0.52
LINC00661-203ENST00000549131 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 MTMR14Q8NCE2 650 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 FBXO3Q9UK99 471 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
LINC00661-203ENST00000549131 OTOFQ9HC10 1997 aa18.3■□□□□ 0.52
LINC00661-203ENST00000549131 CLRN2A0PK11 232 aa18.29■□□□□ 0.52
LINC00661-203ENST00000549131 HSPA8P11142 646 aaKnown RBP18.29■□□□□ 0.52
LINC00661-203ENST00000549131 LBX1P52954 281 aa18.29■□□□□ 0.52
LINC00661-203ENST00000549131 LPIN2Q92539 896 aa18.29■□□□□ 0.52
LINC00661-203ENST00000549131 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
LINC00661-203ENST00000549131 FAM155AB1AL88 458 aaPredicted RBP18.28■□□□□ 0.52
LINC00661-203ENST00000549131 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
LINC00661-203ENST00000549131 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 MOB2Q70IA6 237 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 FTSJ3Q8IY81 847 aaKnown RBP18.28■□□□□ 0.52
LINC00661-203ENST00000549131 TMEM57Q8N5G2 664 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 CCDC102AQ96A19 550 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
LINC00661-203ENST00000549131 AOX1Q06278 1338 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 SLC10A3P09131 477 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 PRMT6Q96LA8 375 aaPredicted RBP18.27■□□□□ 0.52
LINC00661-203ENST00000549131 ZIC5Q96T25 663 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 COPRSQ9NQ92 184 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 TSKSQ9UJT2 592 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 SERPINA10Q9UK55 444 aa18.27■□□□□ 0.52
LINC00661-203ENST00000549131 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
LINC00661-203ENST00000549131 GNAI2P04899 355 aa18.26■□□□□ 0.51
LINC00661-203ENST00000549131 PRKG1Q13976 671 aa18.26■□□□□ 0.51
LINC00661-203ENST00000549131 RASAL3Q86YV0 1011 aa18.26■□□□□ 0.51
LINC00661-203ENST00000549131 DEFB129Q9H1M3 183 aa18.26■□□□□ 0.51
LINC00661-203ENST00000549131 CASP8AP2Q9UKL3 1982 aa18.26■□□□□ 0.51
LINC00661-203ENST00000549131 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
LINC00661-203ENST00000549131 CRKP46108 304 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms