RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PIBF1Q8WXW3 757 aa14.99□□□□□ -0.01
SCAF11-209ENST00000547018 APPBP2Q92624 585 aa14.99□□□□□ -0.01
SCAF11-209ENST00000547018 SLC5A1P13866 664 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 PDE6AP16499 860 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 PDCP20941 246 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 LINC00116Q8NCU8 138 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 TDO2P48775 406 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 CCDC152Q4G0S7 254 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 AIFM3Q96NN9 605 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 SENP2Q9HC62 589 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 USP21Q9UK80 565 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 ESPNB1AK53 854 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 CHRNDQ07001 517 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 PUM3Q15397 648 aaKnown RBP14.98□□□□□ -0.01
SCAF11-209ENST00000547018 ZNF34Q8IZ26 560 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 SPATA5Q8NB90 893 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 GPR108Q9NPR9 543 aa14.98□□□□□ -0.01
SCAF11-209ENST00000547018 EPB41L2O43491 1005 aaKnown RBP14.97□□□□□ -0.01
SCAF11-209ENST00000547018 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
SCAF11-209ENST00000547018 SDR42E1Q8WUS8 393 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 DACT1Q9NYF0 836 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 PRDM1O75626 825 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 CAMTA2O94983 1202 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 ADD1P35611 737 aaKnown RBP14.97□□□□□ -0.01
SCAF11-209ENST00000547018 ZNF445P59923 1031 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 UBE2HP62256 183 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
SCAF11-209ENST00000547018 PHKBQ93100 1093 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 GPR101Q96P66 508 aaPredicted RBP14.97□□□□□ -0.01
SCAF11-209ENST00000547018 NAPBQ9H115 298 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 UBE2Q2LH0YL09 131 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 ZPR1O75312 459 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 SPC24Q8NBT2 197 aa14.97□□□□□ -0.01
SCAF11-209ENST00000547018 BAZ2BQ9UIF8 2168 aaKnown RBP14.96□□□□□ -0.01
SCAF11-209ENST00000547018 GNL2Q13823 731 aaKnown RBP14.96□□□□□ -0.01
SCAF11-209ENST00000547018 NUP133Q8WUM0 1156 aa14.96□□□□□ -0.01
SCAF11-209ENST00000547018 LPIN2Q92539 896 aa14.96□□□□□ -0.01
SCAF11-209ENST00000547018 DSCC1Q9BVC3 393 aa14.96□□□□□ -0.01
SCAF11-209ENST00000547018 PDIA3P30101 505 aaKnown RBP14.96□□□□□ -0.02
SCAF11-209ENST00000547018 TBC1D9BQ66K14 1250 aa14.96□□□□□ -0.02
SCAF11-209ENST00000547018 CELF1Q92879 486 aaKnown RBP14.96□□□□□ -0.02
SCAF11-209ENST00000547018 CTNNA3Q9UI47 895 aa14.96□□□□□ -0.02
SCAF11-209ENST00000547018 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 CYP2D7A0A087X1C5 515 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 ME1P48163 572 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 KCNB2Q92953 911 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 CCNL1Q9UK58 526 aaPredicted RBP14.95□□□□□ -0.02
SCAF11-209ENST00000547018 CYP7A1P22680 504 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 MSNP26038 577 aaKnown RBP14.95□□□□□ -0.02
SCAF11-209ENST00000547018 MAP3K12Q12852 859 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 SF3A1Q15459 793 aaKnown RBP14.95□□□□□ -0.02
SCAF11-209ENST00000547018 AMIGO3Q86WK7 504 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 TBC1D10CQ8IV04 446 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 ORC3Q9UBD5 711 aaPredicted RBP14.95□□□□□ -0.02
SCAF11-209ENST00000547018 PKD1L3Q7Z443 1732 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 TNS2Q63HR2 1409 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 KLRK1P26718 216 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 NCOA7Q8NI08 942 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 SLC4A4Q9Y6R1 1079 aa14.95□□□□□ -0.02
SCAF11-209ENST00000547018 hCG_1642624A0A1W2PR95 340 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 FOXP2O15409 715 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 MCM5P33992 734 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 CCDC183Q5T5S1 534 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 ANKRD18AQ8IVF6 992 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 NSUN7Q8NE18 718 aaKnown RBP14.94□□□□□ -0.02
SCAF11-209ENST00000547018 SETDB2Q96T68 719 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 ROBO1Q9Y6N7 1651 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 PARP4Q9UKK3 1724 aaKnown RBP14.94□□□□□ -0.02
SCAF11-209ENST00000547018 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 ERVV-1B6SEH8 477 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 CTDNEP1O95476 244 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 ADD2P35612 726 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
SCAF11-209ENST00000547018 TUBGCP6Q96RT7 1819 aa14.93□□□□□ -0.02
SCAF11-209ENST00000547018 LCORLQ8N3X6 602 aa14.93□□□□□ -0.02
SCAF11-209ENST00000547018 LEO1Q8WVC0 666 aaPredicted RBP14.93□□□□□ -0.02
SCAF11-209ENST00000547018 ZFYP08048 801 aaPredicted RBP14.93□□□□□ -0.02
SCAF11-209ENST00000547018 HMGB1P09429 215 aaKnown RBP14.93□□□□□ -0.02
SCAF11-209ENST00000547018 CCDC173Q0VFZ6 552 aa14.93□□□□□ -0.02
SCAF11-209ENST00000547018 ISM2Q6H9L7 571 aa14.93□□□□□ -0.02
SCAF11-209ENST00000547018 TNMDQ9H2S6 317 aa14.93□□□□□ -0.02
SCAF11-209ENST00000547018 ADAMTS7Q9UKP4 1686 aa14.92□□□□□ -0.02
SCAF11-209ENST00000547018 IFIT3O14879 490 aaKnown RBP14.92□□□□□ -0.02
SCAF11-209ENST00000547018 CYB5R4Q7L1T6 521 aa14.92□□□□□ -0.02
SCAF11-209ENST00000547018 PLA2G12BQ9BX93 195 aa14.92□□□□□ -0.02
SCAF11-209ENST00000547018 NR1I2O75469 434 aa14.92□□□□□ -0.02
SCAF11-209ENST00000547018 C8orf76Q96K31 380 aa14.92□□□□□ -0.02
SCAF11-209ENST00000547018 BCL11BQ9C0K0 894 aaPredicted RBP14.92□□□□□ -0.02
SCAF11-209ENST00000547018 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
SCAF11-209ENST00000547018 NTSR2O95665 410 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 DYNLL1P63167 89 aaKnown RBP14.91□□□□□ -0.02
SCAF11-209ENST00000547018 CSPP1Q1MSJ5 1256 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 TMEM67Q5HYA8 995 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 VGLL2Q8N8G2 317 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 USP28Q96RU2 1077 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 NUP62CLQ9H1M0 184 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 RIC1Q4ADV7 1423 aa14.91□□□□□ -0.02
SCAF11-209ENST00000547018 TOGARAM1Q9Y4F4 1720 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms