RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 MMP14P50281 582 aa23.62■■□□□ 1.37
CHERP-204ENST00000546538 ECM29Q5VYK3 1845 aa23.62■■□□□ 1.37
CHERP-204ENST00000546538 CCDC85CA6NKD9 419 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 DGKZQ13574 1117 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 ZNF804AQ7Z570 1209 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 ANKRD44Q8N8A2 993 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 MTMR14Q8NCE2 650 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 HDAC9Q9UKV0 1011 aa23.61■■□□□ 1.37
CHERP-204ENST00000546538 F8W031 263 aaPredicted RBP23.6■■□□□ 1.37
CHERP-204ENST00000546538 RABL6Q3YEC7 729 aaPredicted RBP23.6■■□□□ 1.37
CHERP-204ENST00000546538 APOBEC3FQ8IUX4 373 aaKnown RBP23.6■■□□□ 1.37
CHERP-204ENST00000546538 SSH1Q8WYL5 1049 aa23.6■■□□□ 1.37
CHERP-204ENST00000546538 BICC1Q9H694 974 aaKnown RBP23.6■■□□□ 1.37
CHERP-204ENST00000546538 RIPOR2Q9Y4F9 1068 aa23.6■■□□□ 1.37
CHERP-204ENST00000546538 PTPN12Q05209 780 aaKnown RBP23.59■■□□□ 1.37
CHERP-204ENST00000546538 TAF7LQ5H9L4 462 aa23.59■■□□□ 1.37
CHERP-204ENST00000546538 GYG1P46976 350 aa23.59■■□□□ 1.37
CHERP-204ENST00000546538 FKBP1AP62942 108 aaKnown RBP23.59■■□□□ 1.37
CHERP-204ENST00000546538 PRKG1Q13976 671 aa23.59■■□□□ 1.37
CHERP-204ENST00000546538 CDCA7LQ96GN5 454 aa23.59■■□□□ 1.37
CHERP-204ENST00000546538 FAM84BQ96KN1 310 aaPredicted RBP23.59■■□□□ 1.37
CHERP-204ENST00000546538 PRMT6Q96LA8 375 aaPredicted RBP23.59■■□□□ 1.37
CHERP-204ENST00000546538 SPDYE2BA6NHP3 402 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 SPDYE6P0CI01 402 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 SLFN5Q08AF3 891 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 TTLL12Q14166 644 aaPredicted RBP23.58■■□□□ 1.36
CHERP-204ENST00000546538 DLGAP5Q15398 846 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 CFAP100Q494V2 611 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 LDLRAD1Q5T700 205 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 TDRD7Q8NHU6 1098 aaKnown RBP23.58■■□□□ 1.36
CHERP-204ENST00000546538 DEFB129Q9H1M3 183 aa23.58■■□□□ 1.36
CHERP-204ENST00000546538 FAM205AQ6ZU69 1335 aa23.57■■□□□ 1.36
CHERP-204ENST00000546538 MKRN3Q13064 507 aaKnown RBP23.57■■□□□ 1.36
CHERP-204ENST00000546538 LRRC24Q50LG9 513 aa23.57■■□□□ 1.36
CHERP-204ENST00000546538 COL1A1P02452 1464 aaPredicted RBP23.57■■□□□ 1.36
CHERP-204ENST00000546538 ARAP2Q8WZ64 1704 aa23.56■■□□□ 1.36
CHERP-204ENST00000546538 TNRC18O15417 2968 aaPredicted RBP23.56■■□□□ 1.36
CHERP-204ENST00000546538 CLRN2A0PK11 232 aa23.56■■□□□ 1.36
CHERP-204ENST00000546538 E9PSI1 815 aa23.56■■□□□ 1.36
CHERP-204ENST00000546538 UBE4AQ14139 1066 aa23.56■■□□□ 1.36
CHERP-204ENST00000546538 RGS19P49795 217 aa23.55■■□□□ 1.36
CHERP-204ENST00000546538 GRIK5Q16478 980 aa23.55■■□□□ 1.36
CHERP-204ENST00000546538 VGLL2Q8N8G2 317 aa23.55■■□□□ 1.36
CHERP-204ENST00000546538 KLHDC4Q8TBB5 520 aa23.55■■□□□ 1.36
CHERP-204ENST00000546538 USP44Q9H0E7 712 aa23.55■■□□□ 1.36
CHERP-204ENST00000546538 PTPRCP08575 1304 aa23.55■■□□□ 1.36
CHERP-204ENST00000546538 NF2P35240 595 aa23.54■■□□□ 1.36
CHERP-204ENST00000546538 REM2Q8IYK8 340 aaPredicted RBP23.54■■□□□ 1.36
CHERP-204ENST00000546538 HIBADHP31937 336 aaKnown RBP23.53■■□□□ 1.36
CHERP-204ENST00000546538 TM4SF4P48230 202 aa23.53■■□□□ 1.36
CHERP-204ENST00000546538 ANGEL1Q9UNK9 670 aaKnown RBP23.53■■□□□ 1.36
CHERP-204ENST00000546538 HTTP42858 3142 aa23.53■■□□□ 1.36
CHERP-204ENST00000546538 MFSD14BQ5SR56 506 aa23.52■■□□□ 1.36
CHERP-204ENST00000546538 FBXO33Q7Z6M2 555 aa23.52■■□□□ 1.36
CHERP-204ENST00000546538 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
CHERP-204ENST00000546538 TBC1D8O95759 1140 aa23.51■■□□□ 1.35
CHERP-204ENST00000546538 MAP3K11Q16584 847 aa23.51■■□□□ 1.35
CHERP-204ENST00000546538 ARMC9Q7Z3E5 817 aa23.51■■□□□ 1.35
CHERP-204ENST00000546538 CLMNQ96JQ2 1002 aa23.51■■□□□ 1.35
CHERP-204ENST00000546538 R3HDMLQ9H3Y0 253 aa23.51■■□□□ 1.35
CHERP-204ENST00000546538 MROH5Q6ZUA9 1318 aa23.51■■□□□ 1.35
CHERP-204ENST00000546538 NBPF12Q5TAG4 269 aaPredicted RBP23.5■■□□□ 1.35
CHERP-204ENST00000546538 SPRYD7Q5W111 196 aa23.5■■□□□ 1.35
CHERP-204ENST00000546538 CDAN1Q8IWY9 1227 aa23.5■■□□□ 1.35
CHERP-204ENST00000546538 IQSEC3Q9UPP2 1182 aaPredicted RBP23.5■■□□□ 1.35
CHERP-204ENST00000546538 LAMB1P07942 1786 aa23.5■■□□□ 1.35
CHERP-204ENST00000546538 VEZTQ9HBM0 779 aa23.5■■□□□ 1.35
CHERP-204ENST00000546538 TTF2Q9UNY4 1162 aaKnown RBP23.5■■□□□ 1.35
CHERP-204ENST00000546538 RFX5P48382 616 aaPredicted RBP23.49■■□□□ 1.35
CHERP-204ENST00000546538 RASA3Q14644 834 aa23.49■■□□□ 1.35
CHERP-204ENST00000546538 SPDYE2Q495Y8 402 aa23.49■■□□□ 1.35
CHERP-204ENST00000546538 ZNF296Q8WUU4 475 aaPredicted RBP23.49■■□□□ 1.35
CHERP-204ENST00000546538 PPP2R3BQ9Y5P8 575 aa23.49■■□□□ 1.35
CHERP-204ENST00000546538 OTOFQ9HC10 1997 aa23.48■■□□□ 1.35
CHERP-204ENST00000546538 PDE8BO95263 885 aa23.47■■□□□ 1.35
CHERP-204ENST00000546538 RBM5P52756 815 aaKnown RBP eCLIP23.47■■□□□ 1.35
CHERP-204ENST00000546538 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
CHERP-204ENST00000546538 METTL24Q5JXM2 366 aa23.47■■□□□ 1.35
CHERP-204ENST00000546538 CTU1Q7Z7A3 348 aaKnown RBP23.47■■□□□ 1.35
CHERP-204ENST00000546538 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
CHERP-204ENST00000546538 ZNF70Q9UC06 446 aaPredicted RBP23.47■■□□□ 1.35
CHERP-204ENST00000546538 SERPINA10Q9UK55 444 aa23.47■■□□□ 1.35
CHERP-204ENST00000546538 MYO1BO43795 1136 aa23.46■■□□□ 1.35
CHERP-204ENST00000546538 USP2O75604 605 aaPredicted RBP23.46■■□□□ 1.35
CHERP-204ENST00000546538 FGFR2P21802 821 aa23.46■■□□□ 1.35
CHERP-204ENST00000546538 GJA5P36382 358 aa23.46■■□□□ 1.35
CHERP-204ENST00000546538 DZIP1LQ8IYY4 767 aaKnown RBP23.46■■□□□ 1.35
CHERP-204ENST00000546538 TEPSINQ96N21 525 aa23.46■■□□□ 1.35
CHERP-204ENST00000546538 BCAMP50895 628 aa23.45■■□□□ 1.34
CHERP-204ENST00000546538 CENPFP49454 3210 aa23.45■■□□□ 1.34
CHERP-204ENST00000546538 CRKP46108 304 aa23.44■■□□□ 1.34
CHERP-204ENST00000546538 MLLT1Q03111 559 aaPredicted RBP23.44■■□□□ 1.34
CHERP-204ENST00000546538 WNK4Q96J92 1243 aa23.44■■□□□ 1.34
CHERP-204ENST00000546538 CFHR5Q9BXR6 569 aa23.44■■□□□ 1.34
CHERP-204ENST00000546538 SMC4Q9NTJ3 1288 aa23.44■■□□□ 1.34
CHERP-204ENST00000546538 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.44■■□□□ 1.34
CHERP-204ENST00000546538 GPR25O00155 361 aa23.43■■□□□ 1.34
CHERP-204ENST00000546538 SREBF2Q12772 1141 aa23.43■■□□□ 1.34
CHERP-204ENST00000546538 CHAF1AQ13111 956 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms