RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 EXOC5O00471 708 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 MARCH6O60337 910 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 XBP1P17861 261 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 CTDSPL2Q05D32 466 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
CCDC7-210ENST00000545067 MFSD6Q6ZSS7 791 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 MYRIPQ8NFW9 859 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 PGBD1Q96JS3 809 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 M0R2C6 588 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 MBD4O95243 580 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 TOP1P11387 765 aaKnown RBP10.05□□□□□ -0.8
CCDC7-210ENST00000545067 PDIA3P30101 505 aaKnown RBP10.05□□□□□ -0.8
CCDC7-210ENST00000545067 DHX8Q14562 1220 aaKnown RBP10.05□□□□□ -0.8
CCDC7-210ENST00000545067 NSUN7Q8NE18 718 aaKnown RBP10.05□□□□□ -0.8
CCDC7-210ENST00000545067 ARMT1Q9H993 441 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 BTG4Q9NY30 223 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 MAST3O60307 1309 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 SMTNL1A8MU46 457 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 UBASH3AP57075 661 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
CCDC7-210ENST00000545067 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 INCENPQ9NQS7 918 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
CCDC7-210ENST00000545067 TPM1P09493 284 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 SLC5A1P13866 664 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 STX17P56962 302 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
CCDC7-210ENST00000545067 KCNG4Q8TDN1 519 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 IFT172Q9UG01 1749 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 ZFYP08048 801 aaPredicted RBP10.04□□□□□ -0.8
CCDC7-210ENST00000545067 STOX1Q6ZVD7 989 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 PCDHA7Q9UN72 937 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 KCNJ14Q9UNX9 436 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 SKIDA1Q1XH10 827 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
CCDC7-210ENST00000545067 APPBP2Q92624 585 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 PUS7LQ9H0K6 701 aaKnown RBP10.04□□□□□ -0.8
CCDC7-210ENST00000545067 GREM2Q9H772 168 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 DNAI1Q9UI46 699 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 CYP7A1P22680 504 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 NDUFA8P51970 172 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 SAMD1Q6SPF0 538 aaPredicted RBP10.04□□□□□ -0.8
CCDC7-210ENST00000545067 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
CCDC7-210ENST00000545067 NBPF26B4DH59 902 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 PFKFB2O60825 505 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 ZNF202O95125 648 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 PDIA6Q15084 440 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 NBPF10Q6P3W6 841 aaKnown RBP10.03□□□□□ -0.8
CCDC7-210ENST00000545067 SYT10Q6XYQ8 523 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 NBPF15Q8N660 670 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 CLIC6Q96NY7 704 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 KIF20BQ96Q89 1820 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 ZNF532Q9HCE3 1301 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 NAA30Q147X3 362 aaPredicted RBP10.03□□□□□ -0.8
CCDC7-210ENST00000545067 WTAPQ15007 396 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
CCDC7-210ENST00000545067 UBXN4Q92575 508 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 TMEM94Q12767 1356 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 TCIRG1Q13488 830 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 ANO1Q5XXA6 986 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 STAMQ92783 540 aa10.03□□□□□ -0.8
CCDC7-210ENST00000545067 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
CCDC7-210ENST00000545067 RESTQ13127 1097 aa10.02□□□□□ -0.8
CCDC7-210ENST00000545067 GNL3LQ9NVN8 582 aaKnown RBP10.02□□□□□ -0.8
CCDC7-210ENST00000545067 NIP7Q9Y221 180 aaKnown RBP eCLIP10.02□□□□□ -0.8
CCDC7-210ENST00000545067 PHKA1P46020 1223 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 GOLGA8FQ08AF8 430 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 GOLGA8DPQ0D2H9 430 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 SCARF1Q14162 830 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 ZMYM1Q5SVZ6 1142 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 KRT40Q6A162 431 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 PPFIBP1Q86W92 1011 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 KIAA1524Q8TCG1 905 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 DSCC1Q9BVC3 393 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 TTF1Q15361 905 aaPredicted RBP10.02□□□□□ -0.81
CCDC7-210ENST00000545067 RTN1Q16799 776 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 ZNF827Q17R98 1081 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 TEX35Q5T0J7 233 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 TMEM87AQ8NBN3 555 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 DHX58Q96C10 678 aa10.02□□□□□ -0.81
CCDC7-210ENST00000545067 XPO4Q9C0E2 1151 aaKnown RBP10.02□□□□□ -0.81
CCDC7-210ENST00000545067 ANGEL1Q9UNK9 670 aaKnown RBP10.02□□□□□ -0.81
CCDC7-210ENST00000545067 KCNQ4P56696 695 aa10.01□□□□□ -0.81
CCDC7-210ENST00000545067 ST3GAL1Q11201 340 aa10.01□□□□□ -0.81
CCDC7-210ENST00000545067 DPCR1Q3MIW9 517 aa10.01□□□□□ -0.81
CCDC7-210ENST00000545067 NAA16Q6N069 864 aaPredicted RBP10.01□□□□□ -0.81
CCDC7-210ENST00000545067 ANKRD20A12PQ8NF67 263 aa10.01□□□□□ -0.81
CCDC7-210ENST00000545067 LLPHQ9BRT6 129 aaKnown RBP10.01□□□□□ -0.81
CCDC7-210ENST00000545067 TECPR2O15040 1411 aa10.01□□□□□ -0.81
CCDC7-210ENST00000545067 CEMIPQ8WUJ3 1361 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms