RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 NMIQ13287 307 aaPredicted RBP8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 NLGN2Q8NFZ4 835 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 TDRD7Q8NHU6 1098 aaKnown RBP8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 CD2APQ9Y5K6 639 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 TCRBV5S4A2TA0A5A2 114 aa8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 IL1R1P14778 569 aa8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 NFKBIBQ15653 356 aa8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 GORABQ5T7V8 394 aa8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 ZNF589Q86UQ0 364 aaPredicted RBP8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 MYH13Q9UKX3 1938 aa8.46□□□□□ -1.05
HMGCS2-204ENST00000544913 HIBADHP31937 336 aaKnown RBP8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 GRIK5Q16478 980 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 ZMYM1Q5SVZ6 1142 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 TICAM2Q86XR7 235 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 TTLL6Q8N841 843 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 IL27Q8NEV9 243 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 SNX21Q969T3 373 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 SEC62Q99442 399 aaKnown RBP8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 KIF2CQ99661 725 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 FSD1Q9BTV5 496 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 LSG1Q9H089 658 aaKnown RBP8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
HMGCS2-204ENST00000544913 FER1L6Q2WGJ9 1857 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 SEMA3EO15041 775 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 C21orf2O43822 256 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 KCNJ4P48050 445 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 CWC27Q6UX04 472 aaKnown RBP8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 MPNDQ8N594 471 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 OSBP2Q969R2 916 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 USP26Q9BXU7 913 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 CD209Q9NNX6 404 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 MAST3O60307 1309 aa8.45□□□□□ -1.06
HMGCS2-204ENST00000544913 PDE6AP16499 860 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 ADD2P35612 726 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 MAST2Q6P0Q8 1798 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 POTEHQ6S545 545 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 DPP8Q6V1X1 898 aaPredicted RBP8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 ADGRA1Q86SQ6 560 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 HSCBQ8IWL3 235 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 RAD50Q92878 1312 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 SPON1Q9HCB6 807 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 ZNF219Q9P2Y4 722 aaPredicted RBP8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 ARFGEF1Q9Y6D6 1849 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 SALL1Q9NSC2 1324 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 M0R2C6 588 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 RNF113AO15541 343 aaKnown RBP8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 PRELPP51888 382 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 PTH1RQ03431 593 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 CAVIN4Q5BKX8 364 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 CCDC129Q6ZRS4 1044 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 IL17RAQ96F46 866 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 JAG2Q9Y219 1238 aa8.44□□□□□ -1.06
HMGCS2-204ENST00000544913 FAM205AQ6ZU69 1335 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 C6orf229H3BNL8 230 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 NFKBIEO00221 500 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 KIAA2012Q0VF49 1180 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 CERS5Q8N5B7 392 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 PSMD1Q99460 953 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 DIAPH3Q9NSV4 1193 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 RNF216Q9NWF9 866 aaPredicted RBP8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 PIM2Q9P1W9 311 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 DENND2AQ9ULE3 1009 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 PSME4Q14997 1843 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 CCDC171Q6TFL3 1326 aa8.43□□□□□ -1.06
HMGCS2-204ENST00000544913 YDJCA8MPS7 323 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 PRDX5P30044 214 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 COL9A3Q14050 684 aaPredicted RBP8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 UBE3CQ15386 1083 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 CCDC93Q567U6 631 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 VPS53Q5VIR6 699 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 ZNF804AQ7Z570 1209 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 COA1Q9GZY4 146 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 KCNQ5Q9NR82 932 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 GNL3LQ9NVN8 582 aaKnown RBP8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 PALD1Q9ULE6 856 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 TAF6LQ9Y6J9 622 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 ZNF532Q9HCE3 1301 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 HIP1O00291 1037 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 RIMBP2O15034 1052 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 IDH1O75874 414 aaKnown RBP8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 TTF1Q15361 905 aaPredicted RBP8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 WASHC4Q2M389 1173 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 SLC9C2Q5TAH2 1124 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 APPBP2Q92624 585 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 MAP4K1Q92918 833 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 KCNB2Q92953 911 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 NSUN4Q96CB9 384 aaKnown RBP8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 HELLSQ9NRZ9 838 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 CHMP5Q9NZZ3 219 aa8.42□□□□□ -1.06
HMGCS2-204ENST00000544913 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms