RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 EIF3CQ99613 913 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 GOLPH3LQ9H4A5 285 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 VPS18Q9P253 973 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 HOOK1Q9UJC3 728 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 MNX1P50219 401 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 CFAP100Q494V2 611 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 MCTP2Q6DN12 878 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 JMYQ8N9B5 988 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 MSANTD4Q8NCY6 345 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 USP28Q96RU2 1077 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 NAA15Q9BXJ9 866 aaKnown RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 VIPAS39Q9H9C1 493 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 ZCCHC17Q9NP64 241 aaKnown RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 DACH1Q9UI36 760 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 NPHP4O75161 1426 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 CEP170BQ9Y4F5 1589 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 MYH15Q9Y2K3 1946 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 KIF1CO43896 1103 aaKnown RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 CPS1P31327 1500 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 CHMP4BP1P59074 171 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 PIP4K2BP78356 416 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 SETQ01105 290 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 MAP9Q49MG5 647 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 PAXIP1Q6ZW49 1069 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 AACSQ86V21 672 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 NFATC2IPQ8NCF5 419 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 LRRN4CLQ8ND94 238 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 BAG1Q99933 345 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 POLR3EQ9NVU0 708 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 MIS18AQ9NYP9 233 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 LRRC37A3O60309 1634 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 VWA3AA6NCI4 1184 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 JAK2O60674 1132 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 CEBPZQ03701 1054 aaKnown RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 Q6ZUG5 572 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 ANKRD24Q8TF21 1146 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 AKT1S1Q96B36 256 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 ZFP91Q96JP5 570 aaPredicted RBP5.74□□□□□ -1.49
LMO3-229ENST00000543721 ZRANB1Q9UGI0 708 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 CDC23Q9UJX2 597 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 PCDHA7Q9UN72 937 aa5.74□□□□□ -1.49
LMO3-229ENST00000543721 A2ML1A8K2U0 1454 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 OVOS2A0A0J9YW53 1432 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 OVOS2Q6IE36 1432 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 FLT4P35916 1363 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 KIF5CO60282 957 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 ECM2O94769 699 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 CCDC175P0C221 793 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 CMA1P23946 247 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 HDGFP51858 240 aaKnown RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 NCAPHQ15003 741 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 DPCR1Q3MIW9 517 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 BEND3Q5T5X7 828 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 SYNE3Q6ZMZ3 975 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.73□□□□□ -1.49
LMO3-229ENST00000543721 DHX32Q7L7V1 743 aaKnown RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 ELOA2Q8IYF1 753 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 NSUN7Q8NE18 718 aaKnown RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 ZNF274Q96GC6 653 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 LCMT1Q9UIC8 334 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 PTPDC1A2A3K4 754 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 SPTLC2O15270 562 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 TAF5LO75529 589 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 BEND6Q5SZJ8 279 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 LINC00301Q8NCQ3 95 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 CCDC12Q8WUD4 166 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 FAM227BQ96M60 508 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 C9orf78Q9NZ63 289 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 TUBE1Q9UJT0 475 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 MYO5BQ9ULV0 1848 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 NCAPD2Q15021 1401 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 MAP3K19Q56UN5 1328 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 IGSF1Q8N6C5 1336 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 ZNF202O95125 648 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 APPP05067 770 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 LMOD1P29536 600 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 NUBP1P53384 320 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 WHAMMP3Q1A5X7 153 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 CT47A1Q5JQC4 288 aaPredicted RBP5.73□□□□□ -1.49
LMO3-229ENST00000543721 TADA2BQ86TJ2 420 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 MYO1AQ9UBC5 1043 aa5.73□□□□□ -1.49
LMO3-229ENST00000543721 CUTAO60888 179 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 SCRN1Q12765 414 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 MCM6Q14566 821 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 DDX54Q8TDD1 881 aaKnown RBP5.72□□□□□ -1.49
LMO3-229ENST00000543721 FMNL2Q96PY5 1086 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 PDE11AQ9HCR9 933 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CREBZFQ9NS37 354 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 NEO1Q92859 1461 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 ABCC6O95255 1503 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 PLEKHG3A1L390 1219 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 H3BQF6 201 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 NBPF7P0C2Y1 421 aaPredicted RBP5.72□□□□□ -1.49
LMO3-229ENST00000543721 ATP6V1AP38606 617 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 NDUFA8P51970 172 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 TBX2Q13207 712 aaPredicted RBP5.72□□□□□ -1.49
LMO3-229ENST00000543721 HSP90AB2PQ58FF8 381 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms