RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 GNAQP50148 359 aa17.25■□□□□ 0.35
HMGA2-210ENST00000541363 AOPEPQ8N6M6 819 aa17.25■□□□□ 0.35
HMGA2-210ENST00000541363 SPDYE3A6NKU9 549 aa17.25■□□□□ 0.35
HMGA2-210ENST00000541363 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
HMGA2-210ENST00000541363 HCLS1P14317 486 aaPredicted RBP17.24■□□□□ 0.35
HMGA2-210ENST00000541363 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 PDCD7Q8N8D1 485 aaKnown RBP17.24■□□□□ 0.35
HMGA2-210ENST00000541363 PLS1Q14651 629 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 DIXDC1Q155Q3 683 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 MAP3K21Q5TCX8 1036 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
HMGA2-210ENST00000541363 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 PPP2R5CQ13362 524 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 RTN1Q16799 776 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 ALG1Q9BT22 464 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
HMGA2-210ENST00000541363 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
HMGA2-210ENST00000541363 KRT3P12035 628 aa17.24■□□□□ 0.35
HMGA2-210ENST00000541363 WHAMMP3Q1A5X7 153 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
HMGA2-210ENST00000541363 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
HMGA2-210ENST00000541363 RBM28Q9NW13 759 aaKnown RBP17.23■□□□□ 0.35
HMGA2-210ENST00000541363 INPP5BP32019 993 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 AKNAD1Q5T1N1 836 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 ZNF830Q96NB3 372 aaPredicted RBP17.23■□□□□ 0.35
HMGA2-210ENST00000541363 ZBTB43O43298 467 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 NAPAP54920 295 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 CCDC125Q86Z20 511 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 PLCB1Q9NQ66 1216 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 UBL4BQ8N7F7 174 aa17.23■□□□□ 0.35
HMGA2-210ENST00000541363 DNAJC8O75937 253 aaPredicted RBP17.22■□□□□ 0.35
HMGA2-210ENST00000541363 RASSF2P50749 326 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
HMGA2-210ENST00000541363 LGSNQ5TDP6 509 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 NSMCE1Q8WV22 266 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 LZTFL1Q9NQ48 299 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
HMGA2-210ENST00000541363 HAND2P61296 217 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 CROCCP2Q86T23 111 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 PPME1Q9Y570 386 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
HMGA2-210ENST00000541363 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 XAB2Q9HCS7 855 aaKnown RBP17.22■□□□□ 0.35
HMGA2-210ENST00000541363 CXorf38Q8TB03 319 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 KRT9P35527 623 aa17.22■□□□□ 0.35
HMGA2-210ENST00000541363 ST5P78524 1137 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 CCT6AP40227 531 aaKnown RBP17.21■□□□□ 0.35
HMGA2-210ENST00000541363 HHATQ5VTY9 493 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
HMGA2-210ENST00000541363 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 ARHGAP25P42331 645 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 OGFRQ9NZT2 677 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 SPOPO43791 374 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
HMGA2-210ENST00000541363 RFX1P22670 979 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 VSIG1Q86XK7 387 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
HMGA2-210ENST00000541363 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.34
HMGA2-210ENST00000541363 DCAF17Q5H9S7 520 aaPredicted RBP17.21■□□□□ 0.34
HMGA2-210ENST00000541363 LRRC43Q8N309 656 aa17.21■□□□□ 0.34
HMGA2-210ENST00000541363 MRRFQ96E11 262 aaKnown RBP17.21■□□□□ 0.34
HMGA2-210ENST00000541363 RPL13P26373 211 aaKnown RBP17.2■□□□□ 0.34
HMGA2-210ENST00000541363 RPS6KA2Q15349 733 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 LIN9Q5TKA1 542 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 NDUFAB1O14561 156 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
HMGA2-210ENST00000541363 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 ESR2Q92731 530 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 Q9H521 79 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 CDR2Q01850 454 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
HMGA2-210ENST00000541363 UBE2Q2Q8WVN8 375 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 SPECC1L-ADORA2AF8WAN1 911 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 PDCD2Q16342 344 aaPredicted RBP17.2■□□□□ 0.34
HMGA2-210ENST00000541363 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
HMGA2-210ENST00000541363 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
HMGA2-210ENST00000541363 COG7P83436 770 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 RILPQ96NA2 401 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 KRT2P35908 639 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 DHX58Q96C10 678 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
HMGA2-210ENST00000541363 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 BAG1Q99933 345 aaPredicted RBP17.19■□□□□ 0.34
HMGA2-210ENST00000541363 MUM1Q2TAK8 710 aa17.19■□□□□ 0.34
HMGA2-210ENST00000541363 IFT20Q8IY31 132 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms