RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 USP44Q9H0E7 712 aa27.91■■■□□ 2.06
SCARB1-206ENST00000539320 RIPOR2Q9Y4F9 1068 aa27.91■■■□□ 2.06
SCARB1-206ENST00000539320 SLC10A3P09131 477 aa27.9■■■□□ 2.06
SCARB1-206ENST00000539320 FKBP1AP62942 108 aaKnown RBP27.9■■■□□ 2.06
SCARB1-206ENST00000539320 APOBEC3FQ8IUX4 373 aaKnown RBP27.9■■■□□ 2.06
SCARB1-206ENST00000539320 TSKSQ9UJT2 592 aa27.9■■■□□ 2.06
SCARB1-206ENST00000539320 JAG2Q9Y219 1238 aa27.89■■■□□ 2.06
SCARB1-206ENST00000539320 F8W031 263 aaPredicted RBP27.87■■■□□ 2.05
SCARB1-206ENST00000539320 DLGAP5Q15398 846 aa27.87■■■□□ 2.05
SCARB1-206ENST00000539320 LRRC24Q50LG9 513 aa27.87■■■□□ 2.05
SCARB1-206ENST00000539320 METTL24Q5JXM2 366 aa27.87■■■□□ 2.05
SCARB1-206ENST00000539320 PRAMEF18Q5VWM3 479 aa27.87■■■□□ 2.05
SCARB1-206ENST00000539320 COL1A1P02452 1464 aaPredicted RBP27.87■■■□□ 2.05
SCARB1-206ENST00000539320 FAM205AQ6ZU69 1335 aa27.87■■■□□ 2.05
SCARB1-206ENST00000539320 HIBADHP31937 336 aaKnown RBP27.86■■■□□ 2.05
SCARB1-206ENST00000539320 GYG1P46976 350 aa27.86■■■□□ 2.05
SCARB1-206ENST00000539320 RASAL3Q86YV0 1011 aa27.86■■■□□ 2.05
SCARB1-206ENST00000539320 MTMR14Q8NCE2 650 aa27.86■■■□□ 2.05
SCARB1-206ENST00000539320 TDRD7Q8NHU6 1098 aaKnown RBP27.86■■■□□ 2.05
SCARB1-206ENST00000539320 ARAP2Q8WZ64 1704 aa27.85■■■□□ 2.05
SCARB1-206ENST00000539320 NF2P35240 595 aa27.85■■■□□ 2.05
SCARB1-206ENST00000539320 FAM84BQ96KN1 310 aaPredicted RBP27.85■■■□□ 2.05
SCARB1-206ENST00000539320 API5Q9BZZ5 524 aaKnown RBP27.85■■■□□ 2.05
SCARB1-206ENST00000539320 NOB1Q9ULX3 412 aaKnown RBP27.85■■■□□ 2.05
SCARB1-206ENST00000539320 ECM29Q5VYK3 1845 aa27.84■■■□□ 2.05
SCARB1-206ENST00000539320 KIF23Q02241 960 aaPredicted RBP27.84■■■□□ 2.05
SCARB1-206ENST00000539320 CFAP100Q494V2 611 aa27.84■■■□□ 2.05
SCARB1-206ENST00000539320 MOB2Q70IA6 237 aa27.84■■■□□ 2.05
SCARB1-206ENST00000539320 VGLL2Q8N8G2 317 aa27.84■■■□□ 2.05
SCARB1-206ENST00000539320 KLHDC4Q8TBB5 520 aa27.84■■■□□ 2.05
SCARB1-206ENST00000539320 TTLL12Q14166 644 aaPredicted RBP27.83■■■□□ 2.05
SCARB1-206ENST00000539320 SPDYE2BA6NHP3 402 aa27.82■■■□□ 2.04
SCARB1-206ENST00000539320 UBTFL1P0CB47 393 aaPredicted RBP27.82■■■□□ 2.04
SCARB1-206ENST00000539320 SPDYE6P0CI01 402 aa27.82■■■□□ 2.04
SCARB1-206ENST00000539320 MFSD14BQ5SR56 506 aa27.82■■■□□ 2.04
SCARB1-206ENST00000539320 PCDHAC2Q9Y5I4 1007 aa27.82■■■□□ 2.04
SCARB1-206ENST00000539320 KIF16BQ96L93 1317 aa27.82■■■□□ 2.04
SCARB1-206ENST00000539320 PDE8BO95263 885 aa27.81■■■□□ 2.04
SCARB1-206ENST00000539320 RARSP54136 660 aaKnown RBP27.81■■■□□ 2.04
SCARB1-206ENST00000539320 VPS37DQ86XT2 251 aa27.81■■■□□ 2.04
SCARB1-206ENST00000539320 UBE2Q2LH0YL09 131 aa27.8■■■□□ 2.04
SCARB1-206ENST00000539320 MYO1BO43795 1136 aa27.8■■■□□ 2.04
SCARB1-206ENST00000539320 RFX5P48382 616 aaPredicted RBP27.8■■■□□ 2.04
SCARB1-206ENST00000539320 FBXO33Q7Z6M2 555 aa27.8■■■□□ 2.04
SCARB1-206ENST00000539320 SAGE1Q9NXZ1 904 aa27.79■■■□□ 2.04
SCARB1-206ENST00000539320 CLRN2A0PK11 232 aa27.78■■■□□ 2.04
SCARB1-206ENST00000539320 EYA2O00167 538 aa27.78■■■□□ 2.04
SCARB1-206ENST00000539320 PUM3Q15397 648 aaKnown RBP27.78■■■□□ 2.04
SCARB1-206ENST00000539320 CAVIN4Q5BKX8 364 aa27.78■■■□□ 2.04
SCARB1-206ENST00000539320 ARMC9Q7Z3E5 817 aa27.78■■■□□ 2.04
SCARB1-206ENST00000539320 DEFB129Q9H1M3 183 aa27.78■■■□□ 2.04
SCARB1-206ENST00000539320 TTF2Q9UNY4 1162 aaKnown RBP27.78■■■□□ 2.04
SCARB1-206ENST00000539320 PPP2R3BQ9Y5P8 575 aa27.78■■■□□ 2.04
SCARB1-206ENST00000539320 CASP8AP2Q9UKL3 1982 aa27.77■■■□□ 2.04
SCARB1-206ENST00000539320 RBM5P52756 815 aaKnown RBP eCLIP27.77■■■□□ 2.04
SCARB1-206ENST00000539320 PTPN12Q05209 780 aaKnown RBP27.77■■■□□ 2.04
SCARB1-206ENST00000539320 PRMT6Q96LA8 375 aaPredicted RBP27.77■■■□□ 2.04
SCARB1-206ENST00000539320 VEZTQ9HBM0 779 aa27.77■■■□□ 2.04
SCARB1-206ENST00000539320 IQSEC3Q9UPP2 1182 aaPredicted RBP27.77■■■□□ 2.04
SCARB1-206ENST00000539320 AKAP11Q9UKA4 1901 aa27.77■■■□□ 2.04
SCARB1-206ENST00000539320 AOX1Q06278 1338 aa27.76■■■□□ 2.03
SCARB1-206ENST00000539320 IFIT1P09914 478 aaKnown RBP27.76■■■□□ 2.03
SCARB1-206ENST00000539320 REM2Q8IYK8 340 aaPredicted RBP27.76■■■□□ 2.03
SCARB1-206ENST00000539320 CSRNP1Q96S65 589 aa27.76■■■□□ 2.03
SCARB1-206ENST00000539320 SSC5DA1L4H1 1573 aa27.75■■■□□ 2.03
SCARB1-206ENST00000539320 FGFR2P21802 821 aa27.75■■■□□ 2.03
SCARB1-206ENST00000539320 CHAF1AQ13111 956 aaPredicted RBP27.75■■■□□ 2.03
SCARB1-206ENST00000539320 PRKG1Q13976 671 aa27.75■■■□□ 2.03
SCARB1-206ENST00000539320 SERPINA10Q9UK55 444 aa27.75■■■□□ 2.03
SCARB1-206ENST00000539320 HDAC5Q9UQL6 1122 aa27.75■■■□□ 2.03
SCARB1-206ENST00000539320 FRAT2O75474 233 aaPredicted RBP27.74■■■□□ 2.03
SCARB1-206ENST00000539320 TBC1D22AQ8WUA7 517 aa27.74■■■□□ 2.03
SCARB1-206ENST00000539320 ARHGAP45Q92619 1136 aa27.74■■■□□ 2.03
SCARB1-206ENST00000539320 ABHD8Q96I13 439 aa27.74■■■□□ 2.03
SCARB1-206ENST00000539320 RNF186Q9NXI6 227 aa27.74■■■□□ 2.03
SCARB1-206ENST00000539320 LRRFIP2Q9Y608 721 aaKnown RBP27.74■■■□□ 2.03
SCARB1-206ENST00000539320 MEIS3Q99687 375 aa27.73■■■□□ 2.03
SCARB1-206ENST00000539320 TRPA1O75762 1119 aa27.72■■■□□ 2.03
SCARB1-206ENST00000539320 SLC5A1P13866 664 aa27.72■■■□□ 2.03
SCARB1-206ENST00000539320 BCAMP50895 628 aa27.72■■■□□ 2.03
SCARB1-206ENST00000539320 SPDYE2Q495Y8 402 aa27.72■■■□□ 2.03
SCARB1-206ENST00000539320 FBXO3Q9UK99 471 aa27.72■■■□□ 2.03
SCARB1-206ENST00000539320 ANGEL1Q9UNK9 670 aaKnown RBP27.72■■■□□ 2.03
SCARB1-206ENST00000539320 ATG9AQ7Z3C6 839 aa27.71■■■□□ 2.03
SCARB1-206ENST00000539320 LPIN2Q92539 896 aa27.71■■■□□ 2.03
SCARB1-206ENST00000539320 SIL1Q9H173 461 aa27.71■■■□□ 2.03
SCARB1-206ENST00000539320 CIAO1O76071 339 aa27.7■■■□□ 2.02
SCARB1-206ENST00000539320 CRKP46108 304 aa27.7■■■□□ 2.02
SCARB1-206ENST00000539320 TNFAIP1Q13829 316 aa27.7■■■□□ 2.02
SCARB1-206ENST00000539320 GRIK5Q16478 980 aa27.7■■■□□ 2.02
SCARB1-206ENST00000539320 LDLRAD1Q5T700 205 aa27.7■■■□□ 2.02
SCARB1-206ENST00000539320 INTS3Q68E01 1043 aaKnown RBP27.7■■■□□ 2.02
SCARB1-206ENST00000539320 ZNF70Q9UC06 446 aaPredicted RBP27.7■■■□□ 2.02
SCARB1-206ENST00000539320 RASA3Q14644 834 aa27.69■■■□□ 2.02
SCARB1-206ENST00000539320 SUPT20HL1Q3ZLR7 823 aa27.69■■■□□ 2.02
SCARB1-206ENST00000539320 DZIP1LQ8IYY4 767 aaKnown RBP27.69■■■□□ 2.02
SCARB1-206ENST00000539320 MIER1Q8N108 512 aa27.69■■■□□ 2.02
SCARB1-206ENST00000539320 FZD1Q9UP38 647 aa27.69■■■□□ 2.02
SCARB1-206ENST00000539320 PPP1R12BO60237 982 aaPredicted RBP27.68■■■□□ 2.02
SCARB1-206ENST00000539320 MAP3K11Q16584 847 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms