RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 HABP4Q5JVS0 413 aaKnown RBP15.85■□□□□ 0.13
VAMP1-206ENST00000538970 ZNF804AQ7Z570 1209 aa15.85■□□□□ 0.13
VAMP1-206ENST00000538970 ZNF594Q96JF6 807 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-206ENST00000538970 SRCIN1Q9C0H9 1055 aa15.85■□□□□ 0.13
VAMP1-206ENST00000538970 C9orf78Q9NZ63 289 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-206ENST00000538970 TTLL12Q14166 644 aaPredicted RBP15.84■□□□□ 0.13
VAMP1-206ENST00000538970 TAF7LQ5H9L4 462 aa15.84■□□□□ 0.13
VAMP1-206ENST00000538970 SLC4A10Q6U841 1118 aa15.84■□□□□ 0.13
VAMP1-206ENST00000538970 LDHAL6AQ6ZMR3 332 aa15.84■□□□□ 0.13
VAMP1-206ENST00000538970 FKBP1AP62942 108 aaKnown RBP15.83■□□□□ 0.12
VAMP1-206ENST00000538970 DLGAP5Q15398 846 aa15.83■□□□□ 0.12
VAMP1-206ENST00000538970 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.12
VAMP1-206ENST00000538970 KAZALD1Q96I82 304 aa15.83■□□□□ 0.12
VAMP1-206ENST00000538970 SUCLG2Q96I99 432 aa15.83■□□□□ 0.12
VAMP1-206ENST00000538970 CNNM1Q9NRU3 951 aa15.83■□□□□ 0.12
VAMP1-206ENST00000538970 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
VAMP1-206ENST00000538970 UTYO14607 1347 aa15.82■□□□□ 0.12
VAMP1-206ENST00000538970 SSC5DA1L4H1 1573 aa15.82■□□□□ 0.12
VAMP1-206ENST00000538970 PLIN1O60240 522 aa15.81■□□□□ 0.12
VAMP1-206ENST00000538970 NBPF7P0C2Y1 421 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-206ENST00000538970 GCC1Q96CN9 775 aa15.81■□□□□ 0.12
VAMP1-206ENST00000538970 DEFB129Q9H1M3 183 aa15.81■□□□□ 0.12
VAMP1-206ENST00000538970 JAG2Q9Y219 1238 aa15.81■□□□□ 0.12
VAMP1-206ENST00000538970 PCDHAC2Q9Y5I4 1007 aa15.81■□□□□ 0.12
VAMP1-206ENST00000538970 MKI67P46013 3256 aaKnown RBP15.81■□□□□ 0.12
VAMP1-206ENST00000538970 ECM29Q5VYK3 1845 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 F8W031 263 aaPredicted RBP15.8■□□□□ 0.12
VAMP1-206ENST00000538970 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 PTPN12Q05209 780 aaKnown RBP15.8■□□□□ 0.12
VAMP1-206ENST00000538970 PRKG1Q13976 671 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 CFAP100Q494V2 611 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 LDLRAD1Q5T700 205 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 ARMC9Q7Z3E5 817 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 MRPL50Q8N5N7 158 aaKnown RBP15.8■□□□□ 0.12
VAMP1-206ENST00000538970 PUS3Q9BZE2 481 aaKnown RBP15.8■□□□□ 0.12
VAMP1-206ENST00000538970 PPP2R3BQ9Y5P8 575 aa15.8■□□□□ 0.12
VAMP1-206ENST00000538970 AOX1Q06278 1338 aa15.79■□□□□ 0.12
VAMP1-206ENST00000538970 FAM205AQ6ZU69 1335 aa15.79■□□□□ 0.12
VAMP1-206ENST00000538970 TM4SF4P48230 202 aa15.79■□□□□ 0.12
VAMP1-206ENST00000538970 UBE4AQ14139 1066 aa15.79■□□□□ 0.12
VAMP1-206ENST00000538970 RABL6Q3YEC7 729 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-206ENST00000538970 ZNF296Q8WUU4 475 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-206ENST00000538970 BICC1Q9H694 974 aaKnown RBP15.79■□□□□ 0.12
VAMP1-206ENST00000538970 ANGEL1Q9UNK9 670 aaKnown RBP15.79■□□□□ 0.12
VAMP1-206ENST00000538970 ARAP2Q8WZ64 1704 aa15.79■□□□□ 0.12
VAMP1-206ENST00000538970 PTPRCP08575 1304 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 CLRN2A0PK11 232 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 MYO1BO43795 1136 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 TBC1D8O95759 1140 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 GYG1P46976 350 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 MKRN3Q13064 507 aaKnown RBP15.78■□□□□ 0.12
VAMP1-206ENST00000538970 MAP3K11Q16584 847 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 ANKRD44Q8N8A2 993 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 TDRD7Q8NHU6 1098 aaKnown RBP15.78■□□□□ 0.12
VAMP1-206ENST00000538970 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-206ENST00000538970 FZD1Q9UP38 647 aa15.78■□□□□ 0.12
VAMP1-206ENST00000538970 MROH5Q6ZUA9 1318 aa15.77■□□□□ 0.12
VAMP1-206ENST00000538970 E9PSI1 815 aa15.77■□□□□ 0.12
VAMP1-206ENST00000538970 HIBADHP31937 336 aaKnown RBP15.77■□□□□ 0.12
VAMP1-206ENST00000538970 SREBF2Q12772 1141 aa15.77■□□□□ 0.12
VAMP1-206ENST00000538970 MFSD14BQ5SR56 506 aa15.77■□□□□ 0.12
VAMP1-206ENST00000538970 SPRYD7Q5W111 196 aa15.77■□□□□ 0.12
VAMP1-206ENST00000538970 FAM84BQ96KN1 310 aaPredicted RBP15.77■□□□□ 0.12
VAMP1-206ENST00000538970 RIPOR2Q9Y4F9 1068 aa15.77■□□□□ 0.12
VAMP1-206ENST00000538970 FXR1P51114 621 aaKnown RBP eCLIP15.76■□□□□ 0.11
VAMP1-206ENST00000538970 PKN2Q16513 984 aaKnown RBP15.76■□□□□ 0.11
VAMP1-206ENST00000538970 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
VAMP1-206ENST00000538970 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
VAMP1-206ENST00000538970 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
VAMP1-206ENST00000538970 NOM1Q5C9Z4 860 aaKnown RBP15.75■□□□□ 0.11
VAMP1-206ENST00000538970 CFHR5Q9BXR6 569 aa15.75■□□□□ 0.11
VAMP1-206ENST00000538970 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
VAMP1-206ENST00000538970 TTF2Q9UNY4 1162 aaKnown RBP15.75■□□□□ 0.11
VAMP1-206ENST00000538970 PPP1R12BO60237 982 aaPredicted RBP15.74■□□□□ 0.11
VAMP1-206ENST00000538970 SLFN5Q08AF3 891 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 SUPT20HL1Q3ZLR7 823 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 LRRC24Q50LG9 513 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
VAMP1-206ENST00000538970 VGLL2Q8N8G2 317 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 CLMNQ96JQ2 1002 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 LAMB1P07942 1786 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 HTTP42858 3142 aa15.74■□□□□ 0.11
VAMP1-206ENST00000538970 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 GPR25O00155 361 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 ZBTB48P10074 688 aaPredicted RBP15.73■□□□□ 0.11
VAMP1-206ENST00000538970 RASA3Q14644 834 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 METTL24Q5JXM2 366 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 FBXO46Q6PJ61 603 aaPredicted RBP15.73■□□□□ 0.11
VAMP1-206ENST00000538970 FBXO33Q7Z6M2 555 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
VAMP1-206ENST00000538970 POTEFA5A3E0 1075 aa15.72■□□□□ 0.11
VAMP1-206ENST00000538970 MANSC4A6NHS7 340 aaPredicted RBP15.72■□□□□ 0.11
VAMP1-206ENST00000538970 PDE8BO95263 885 aa15.72■□□□□ 0.11
VAMP1-206ENST00000538970 TNFAIP1Q13829 316 aa15.72■□□□□ 0.11
VAMP1-206ENST00000538970 KLHDC4Q8TBB5 520 aa15.72■□□□□ 0.11
VAMP1-206ENST00000538970 SLC10A4Q96EP9 437 aa15.72■□□□□ 0.11
VAMP1-206ENST00000538970 WNK4Q96J92 1243 aa15.72■□□□□ 0.11
VAMP1-206ENST00000538970 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms