RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 BEGAINQ9BUH8 593 aa26.81■■□□□ 1.88
CCDC78-215ENST00000538176 ATF7IPQ6VMQ6 1270 aa26.8■■□□□ 1.88
CCDC78-215ENST00000538176 CDCA5Q96FF9 252 aa26.8■■□□□ 1.88
CCDC78-215ENST00000538176 ZNF646O15015 1829 aaPredicted RBP26.79■■□□□ 1.88
CCDC78-215ENST00000538176 IFIT1P09914 478 aaKnown RBP26.79■■□□□ 1.88
CCDC78-215ENST00000538176 RFX5P48382 616 aaPredicted RBP26.79■■□□□ 1.88
CCDC78-215ENST00000538176 CTCFP49711 727 aaPredicted RBP26.79■■□□□ 1.88
CCDC78-215ENST00000538176 PTPN12Q05209 780 aaKnown RBP26.79■■□□□ 1.88
CCDC78-215ENST00000538176 DLGAP5Q15398 846 aa26.79■■□□□ 1.88
CCDC78-215ENST00000538176 FBXO33Q7Z6M2 555 aa26.79■■□□□ 1.88
CCDC78-215ENST00000538176 VGLL2Q8N8G2 317 aa26.79■■□□□ 1.88
CCDC78-215ENST00000538176 ASTN2O75129 1339 aaPredicted RBP26.79■■□□□ 1.88
CCDC78-215ENST00000538176 MYO1BO43795 1136 aa26.78■■□□□ 1.88
CCDC78-215ENST00000538176 CIAO1O76071 339 aa26.78■■□□□ 1.88
CCDC78-215ENST00000538176 GYG1P46976 350 aa26.78■■□□□ 1.88
CCDC78-215ENST00000538176 PUM3Q15397 648 aaKnown RBP26.78■■□□□ 1.88
CCDC78-215ENST00000538176 IFFO2Q5TF58 517 aa26.78■■□□□ 1.88
CCDC78-215ENST00000538176 APOBEC3FQ8IUX4 373 aaKnown RBP26.78■■□□□ 1.88
CCDC78-215ENST00000538176 CCDC102AQ96A19 550 aa26.78■■□□□ 1.88
CCDC78-215ENST00000538176 ZBED3Q96IU2 234 aaPredicted RBP26.78■■□□□ 1.88
CCDC78-215ENST00000538176 ZBED9Q6R2W3 1325 aa26.78■■□□□ 1.88
CCDC78-215ENST00000538176 NOGQ13253 232 aa26.77■■□□□ 1.88
CCDC78-215ENST00000538176 GRM1Q13255 1194 aa26.77■■□□□ 1.88
CCDC78-215ENST00000538176 RGMBQ6NW40 437 aa26.77■■□□□ 1.88
CCDC78-215ENST00000538176 CERS5Q8N5B7 392 aa26.77■■□□□ 1.88
CCDC78-215ENST00000538176 KLHDC4Q8TBB5 520 aa26.77■■□□□ 1.88
CCDC78-215ENST00000538176 FRAT1Q92837 279 aaPredicted RBP26.77■■□□□ 1.88
CCDC78-215ENST00000538176 BCAR3O75815 825 aa26.76■■□□□ 1.87
CCDC78-215ENST00000538176 TRIM27P14373 513 aa26.76■■□□□ 1.87
CCDC78-215ENST00000538176 NF2P35240 595 aa26.76■■□□□ 1.87
CCDC78-215ENST00000538176 TBC1D22AQ8WUA7 517 aa26.76■■□□□ 1.87
CCDC78-215ENST00000538176 PRDM10Q9NQV6 1147 aa26.76■■□□□ 1.87
CCDC78-215ENST00000538176 LRRFIP2Q9Y608 721 aaKnown RBP26.76■■□□□ 1.87
CCDC78-215ENST00000538176 FRAT2O75474 233 aaPredicted RBP26.75■■□□□ 1.87
CCDC78-215ENST00000538176 MFSD14BQ5SR56 506 aa26.75■■□□□ 1.87
CCDC78-215ENST00000538176 ZKSCAN2Q63HK3 967 aa26.75■■□□□ 1.87
CCDC78-215ENST00000538176 DLK2Q6UY11 383 aa26.75■■□□□ 1.87
CCDC78-215ENST00000538176 LPIN2Q92539 896 aa26.75■■□□□ 1.87
CCDC78-215ENST00000538176 FOXN1O15353 648 aa26.74■■□□□ 1.87
CCDC78-215ENST00000538176 COL13A1Q5TAT6 717 aaPredicted RBP26.74■■□□□ 1.87
CCDC78-215ENST00000538176 MEIS3Q99687 375 aa26.74■■□□□ 1.87
CCDC78-215ENST00000538176 CEP126Q9P2H0 1117 aa26.74■■□□□ 1.87
CCDC78-215ENST00000538176 CA12O43570 354 aa26.73■■□□□ 1.87
CCDC78-215ENST00000538176 SLC5A1P13866 664 aa26.73■■□□□ 1.87
CCDC78-215ENST00000538176 FGFR2P21802 821 aa26.73■■□□□ 1.87
CCDC78-215ENST00000538176 IL15P40933 162 aaPredicted RBP26.73■■□□□ 1.87
CCDC78-215ENST00000538176 COPRSQ9NQ92 184 aa26.73■■□□□ 1.87
CCDC78-215ENST00000538176 ATG9AQ7Z3C6 839 aa26.72■■□□□ 1.87
CCDC78-215ENST00000538176 SERPINA10Q9UK55 444 aa26.72■■□□□ 1.87
CCDC78-215ENST00000538176 PPP2R3BQ9Y5P8 575 aa26.72■■□□□ 1.87
CCDC78-215ENST00000538176 THSD7BQ9C0I4 1608 aa26.72■■□□□ 1.87
CCDC78-215ENST00000538176 F8W031 263 aaPredicted RBP26.71■■□□□ 1.87
CCDC78-215ENST00000538176 ZNF157P51786 506 aaPredicted RBP26.71■■□□□ 1.87
CCDC78-215ENST00000538176 MTX1Q13505 466 aa26.71■■□□□ 1.87
CCDC78-215ENST00000538176 CFAP100Q494V2 611 aa26.71■■□□□ 1.87
CCDC78-215ENST00000538176 SUGT1Q9Y2Z0 365 aa26.71■■□□□ 1.87
CCDC78-215ENST00000538176 COL1A1P02452 1464 aaPredicted RBP26.7■■□□□ 1.87
CCDC78-215ENST00000538176 SPDYE2BA6NHP3 402 aa26.7■■□□□ 1.86
CCDC78-215ENST00000538176 SPDYE6P0CI01 402 aa26.7■■□□□ 1.86
CCDC78-215ENST00000538176 HDLBPQ00341 1268 aaKnown RBP26.7■■□□□ 1.86
CCDC78-215ENST00000538176 REM2Q8IYK8 340 aaPredicted RBP26.7■■□□□ 1.86
CCDC78-215ENST00000538176 TTF2Q9UNY4 1162 aaKnown RBP26.7■■□□□ 1.86
CCDC78-215ENST00000538176 AOC2O75106 756 aa26.69■■□□□ 1.86
CCDC78-215ENST00000538176 GNAI2P04899 355 aa26.69■■□□□ 1.86
CCDC78-215ENST00000538176 RBM5P52756 815 aaKnown RBP eCLIP26.69■■□□□ 1.86
CCDC78-215ENST00000538176 MRIQ9BWK5 157 aa26.69■■□□□ 1.86
CCDC78-215ENST00000538176 JAG2Q9Y219 1238 aa26.69■■□□□ 1.86
CCDC78-215ENST00000538176 BCAMP50895 628 aa26.68■■□□□ 1.86
CCDC78-215ENST00000538176 PRMT6Q96LA8 375 aaPredicted RBP26.68■■□□□ 1.86
CCDC78-215ENST00000538176 SIL1Q9H173 461 aa26.68■■□□□ 1.86
CCDC78-215ENST00000538176 GNL3LQ9NVN8 582 aaKnown RBP26.68■■□□□ 1.86
CCDC78-215ENST00000538176 SRGAP3O43295 1099 aa26.67■■□□□ 1.86
CCDC78-215ENST00000538176 CLUAP1Q96AJ1 413 aa26.67■■□□□ 1.86
CCDC78-215ENST00000538176 DEFB129Q9H1M3 183 aa26.67■■□□□ 1.86
CCDC78-215ENST00000538176 PAPPA2Q9BXP8 1791 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 ZBTB22O15209 634 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 TNFAIP1Q13829 316 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 ATP2B3Q16720 1220 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 ARMC9Q7Z3E5 817 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 TNS4Q8IZW8 715 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 WDR66Q8TBY9 1149 aa26.66■■□□□ 1.86
CCDC78-215ENST00000538176 MAST3O60307 1309 aa26.65■■□□□ 1.86
CCDC78-215ENST00000538176 FAM155AB1AL88 458 aaPredicted RBP26.65■■□□□ 1.86
CCDC78-215ENST00000538176 LBX1P52954 281 aa26.65■■□□□ 1.86
CCDC78-215ENST00000538176 TTLL12Q14166 644 aaPredicted RBP26.65■■□□□ 1.86
CCDC78-215ENST00000538176 SUPT20HL1Q3ZLR7 823 aa26.65■■□□□ 1.86
CCDC78-215ENST00000538176 FTSJ3Q8IY81 847 aaKnown RBP26.65■■□□□ 1.86
CCDC78-215ENST00000538176 AKAP2Q9Y2D5 859 aa26.65■■□□□ 1.86
CCDC78-215ENST00000538176 SLC10A3P09131 477 aa26.64■■□□□ 1.86
CCDC78-215ENST00000538176 CHAF1AQ13111 956 aaPredicted RBP26.64■■□□□ 1.86
CCDC78-215ENST00000538176 SCAF8Q9UPN6 1271 aaKnown RBP26.64■■□□□ 1.86
CCDC78-215ENST00000538176 IQSEC3Q9UPP2 1182 aaPredicted RBP26.64■■□□□ 1.86
CCDC78-215ENST00000538176 UNCXA6NJT0 531 aa26.63■■□□□ 1.85
CCDC78-215ENST00000538176 SEMA3EO15041 775 aa26.63■■□□□ 1.85
CCDC78-215ENST00000538176 HSPA8P11142 646 aaKnown RBP26.63■■□□□ 1.85
CCDC78-215ENST00000538176 PRAMEF18Q5VWM3 479 aa26.63■■□□□ 1.85
CCDC78-215ENST00000538176 DZIP1LQ8IYY4 767 aaKnown RBP26.63■■□□□ 1.85
CCDC78-215ENST00000538176 TMEM57Q8N5G2 664 aa26.63■■□□□ 1.85
CCDC78-215ENST00000538176 ECM29Q5VYK3 1845 aa26.62■■□□□ 1.85
CCDC78-215ENST00000538176 PPP1R12BO60237 982 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms