RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 FAM9BQ8IZU0 186 aa7.75□□□□□ -1.17
DDB1-210ENST00000538129 TTC5Q8N0Z6 440 aa7.75□□□□□ -1.17
DDB1-210ENST00000538129 CCDC82Q8N4S0 544 aa7.75□□□□□ -1.17
DDB1-210ENST00000538129 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
DDB1-210ENST00000538129 RRP7AQ9Y3A4 280 aaKnown RBP7.75□□□□□ -1.17
DDB1-210ENST00000538129 NUP188Q5SRE5 1749 aa7.75□□□□□ -1.17
DDB1-210ENST00000538129 SIPA1L3O60292 1781 aaPredicted RBP7.74□□□□□ -1.17
DDB1-210ENST00000538129 ZNF831Q5JPB2 1677 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
DDB1-210ENST00000538129 ITPK1Q13572 414 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
DDB1-210ENST00000538129 CCDC27Q2M243 656 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
DDB1-210ENST00000538129 CALR3Q96L12 384 aaKnown RBP7.74□□□□□ -1.17
DDB1-210ENST00000538129 FMNL2Q96PY5 1086 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 SLC4A9Q96Q91 983 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 TEX13AQ9BXU3 409 aaPredicted RBP7.74□□□□□ -1.17
DDB1-210ENST00000538129 ALG2Q9H553 416 aa7.74□□□□□ -1.17
DDB1-210ENST00000538129 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
DDB1-210ENST00000538129 FLAD1Q8NFF5 587 aa7.73□□□□□ -1.17
DDB1-210ENST00000538129 ZNF496Q96IT1 587 aaPredicted RBP7.73□□□□□ -1.17
DDB1-210ENST00000538129 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
DDB1-210ENST00000538129 CYLDQ9NQC7 956 aa7.73□□□□□ -1.17
DDB1-210ENST00000538129 TMPRSS4Q9NRS4 437 aa7.73□□□□□ -1.17
DDB1-210ENST00000538129 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
DDB1-210ENST00000538129 TFCP2L1Q9NZI6 479 aa7.73□□□□□ -1.17
DDB1-210ENST00000538129 ATP5J2-PTCD1G3V325 749 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 CHL1O00533 1208 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 KCNQ3O43525 872 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 STARD3NLO95772 234 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 ADH1AP07327 375 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 SNRPA1P09661 255 aaKnown RBP7.72□□□□□ -1.17
DDB1-210ENST00000538129 CYP19A1P11511 503 aaPredicted RBP7.72□□□□□ -1.17
DDB1-210ENST00000538129 ERVK-9P63128 1117 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 ZNF827Q17R98 1081 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 EML3Q32P44 896 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 LINC00116Q8NCU8 138 aa7.72□□□□□ -1.17
DDB1-210ENST00000538129 HEG1Q9ULI3 1381 aa7.71□□□□□ -1.17
DDB1-210ENST00000538129 PAPPAQ13219 1627 aa7.71□□□□□ -1.17
DDB1-210ENST00000538129 C5P01031 1676 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 RPS6KA4O75676 772 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 SKIP12755 728 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 EIF4A1P60842 406 aaKnown RBP7.71□□□□□ -1.18
DDB1-210ENST00000538129 C6orf118Q5T5N4 469 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 INTS5Q6P9B9 1019 aaKnown RBP7.71□□□□□ -1.18
DDB1-210ENST00000538129 DNAJC10Q8IXB1 793 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 SLC16A10Q8TF71 515 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 PURBQ96QR8 312 aaKnown RBP7.71□□□□□ -1.18
DDB1-210ENST00000538129 TSPYL4Q9UJ04 414 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 KCPQ6ZWJ8 1503 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 MYH14Q7Z406 1995 aaKnown RBP7.71□□□□□ -1.18
DDB1-210ENST00000538129 CNTNAP4Q9C0A0 1308 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 UBR2Q8IWV8 1755 aa7.71□□□□□ -1.18
DDB1-210ENST00000538129 C4BP0C0L5 1744 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 ZNF853P0CG23 659 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 BMP1P13497 986 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 SSFA2P28290 1259 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 CRKLP46109 303 aaKnown RBP7.7□□□□□ -1.18
DDB1-210ENST00000538129 GNAI1P63096 354 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 RELBQ01201 579 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 CBLBQ13191 982 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 OXLD1Q5BKU9 147 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 COL23A1Q86Y22 540 aaPredicted RBP7.7□□□□□ -1.18
DDB1-210ENST00000538129 WDR63Q8IWG1 891 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 PHTF2Q8N3S3 785 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 GLMNQ92990 594 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 IFT57Q9NWB7 429 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 GMPR2Q9P2T1 348 aaKnown RBP7.7□□□□□ -1.18
DDB1-210ENST00000538129 RTCBQ9Y3I0 505 aaKnown RBP7.7□□□□□ -1.18
DDB1-210ENST00000538129 IL16Q14005 1332 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 PNPLA7Q6ZV29 1317 aa7.7□□□□□ -1.18
DDB1-210ENST00000538129 CICQ96RK0 1608 aaPredicted RBP7.7□□□□□ -1.18
DDB1-210ENST00000538129 COL5A3P25940 1745 aaPredicted RBP7.69□□□□□ -1.18
DDB1-210ENST00000538129 QSER1Q2KHR3 1735 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 MAN1A2O60476 641 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 LILRA1O75019 489 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 GNRH1P01148 92 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 GTF2E1P29083 439 aaPredicted RBP7.69□□□□□ -1.18
DDB1-210ENST00000538129 PTGIRP43119 386 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 TRIM46Q7Z4K8 759 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 MTFR1LQ9H019 292 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 CCDC87Q9NVE4 849 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 DACH1Q9UI36 760 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 NOD1Q9Y239 953 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 LAS1LQ9Y4W2 734 aaKnown RBP7.69□□□□□ -1.18
DDB1-210ENST00000538129 USP16Q9Y5T5 823 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 KDM3BQ7LBC6 1761 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 SRCAPQ6ZRS2 3230 aa7.69□□□□□ -1.18
DDB1-210ENST00000538129 UBR3Q6ZT12 1888 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 POM121CA8CG34 1229 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 SPINT1O43278 529 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 RFC4P35249 363 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms